Cow genome map

Conread name: Ova1-OVRM10123C03

Conread position: 1-103
Cow position: chrX:41764515-41764623 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 1-106
Cow position: chrX:25411714-25411821 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 93
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 36, 27

Conread position: 1-109
Cow position: chrX:29509570-29509458 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 1-110
Cow position: chrX:14924873-14924985 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 1-110
Cow position: chrX:40452335-40452225 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 95
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 1-112
Cow position: chrX:41167091-41166978 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 1-113
Cow position: chrX:11614573-11614687 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 1-113
Cow position: chrX:14003767-14003654 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 1-113
Cow position: chrX:38439352-38439465 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 99
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 1-114
Cow position: chrX:17497960-17498071 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 98
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 40, 8

Conread position: 1-114
Cow position: chrX:22387369-22387254 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 100
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 1-114
Cow position: chrX:28134224-28134334 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 33

Conread position: 1-114
Cow position: chrX:35388028-35387914 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 1-114
Cow position: chrX:35681212-35681329 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 1-114
Cow position: chrX:36961513-36961631 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 103
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 1-116
Cow position: chrX:46315503-46315388 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 111

Conread position: 1-117
Cow position: chrX:15147315-15147195 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 1-120
Cow position: chrX:43049222-43049343 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 1-121
Cow position: chrX:1514533-1514415 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 79

Conread position: 1-121
Cow position: chrX:5872191-5872314 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 98

Conread position: 1-121
Cow position: chrX:6234579-6234457 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 1-121
Cow position: chrX:7718732-7718849 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 21

Conread position: 1-121
Cow position: chrX:10412111-10411991 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 40, 67

Conread position: 1-121
Cow position: chrX:11589714-11589592 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 1-121
Cow position: chrX:19003174-19003295 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 1-121
Cow position: chrX:31294683-31294568 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 1-121
Cow position: chrX:35284493-35284615 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 1-121
Cow position: chrX:42874855-42874979 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 1-125
Cow position: chrX:41743785-41743911 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 1-144
Cow position: chrX:36723217-36723067 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 1-146
Cow position: chrX:27772087-27771940 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 100

Conread position: 1-232
Cow position: chrX:12405513-12405291 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 119

Conread position: 1-256
Cow position: chrX:15814961-15815198 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 73

Conread position: 1-257
Cow position: chrX:38936574-38936815 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 1-261
Cow position: chrX:21566276-21566526 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 183
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 124

Conread position: 1-262
Cow position: chrX:11856302-11856550 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 41, 81

Conread position: 1-270
Cow position: chrX:18695046-18694803 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 1-270
Cow position: chrX:19273849-19273578 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 184
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 103

Conread position: 1-274
Cow position: chrX:29120920-29121179 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 41, 123

Conread position: 1-274
Cow position: chrX:29680386-29680129 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 204
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 41, 122

Conread position: 1-274
Cow position: chrX:40480995-40480735 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 141

Conread position: 1-290
Cow position: chrX:23514141-23513874 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 211
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 41, 109

Conread position: 1-291
Cow position: chrX:8797125-8797398 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 215
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 18, 118

Conread position: 1-291
Cow position: chrX:38728611-38728883 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 40, 124

Conread position: 1-299
Cow position: chrX:616388-616101 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 40, 141

Conread position: 1-299
Cow position: chrX:11085183-11084906 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 214
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 101

Conread position: 1-299
Cow position: chrX:14599407-14599689 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 104

Conread position: 1-299
Cow position: chrX:27394146-27393869 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 223
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 12, 87

Conread position: 1-299
Cow position: chrX:34401872-34402163 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 116

Conread position: 1-300
Cow position: chrX:42171422-42171138 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 205
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 117

Conread position: 1-306
Cow position: chrX:6278628-6278334 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 214
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 36, 146

Conread position: 1-306
Cow position: chrX:11717910-11717619 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 216
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 39, 51

Conread position: 1-316
Cow position: chrX:17888538-17888251 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 224
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 41, 12

Conread position: 1-330
Cow position: chrX:13382203-13382514 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 237
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 39, 124

Conread position: 1-335
Cow position: chrX:21672429-21672760 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 234
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 37, 120

Conread position: 1-347
Cow position: chrX:34502796-34503139 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 41, 143

Conread position: 1-353
Cow position: chrX:27227997-27228345 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 237
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 254, 44

Conread position: 1-353
Cow position: chrX:30840430-30840757 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 242
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 155, 47

Conread position: 1-353
Cow position: chrX:37955707-37956061 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 77

Conread position: 1-354
Cow position: chrX:20151720-20152065 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 118

Conread position: 1-354
Cow position: chrX:34505173-34504836 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 242
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 72

Conread position: 1-354
Cow position: chrX:34543660-34544003 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 82

Conread position: 1-355
Cow position: chrX:32820902-32821258 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 261
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 36, 121

Conread position: 1-357
Cow position: chrX:6488450-6488785 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 252
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 36, 126

Conread position: 1-357
Cow position: chrX:7336702-7337067 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 104

Conread position: 1-359
Cow position: chrX:43115025-43115371 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 252
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 24, 102

Conread position: 1-360
Cow position: chrX:8869528-8869181 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 40

Conread position: 1-360
Cow position: chrX:29723615-29723974 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 251
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 37, 135

Conread position: 1-360
Cow position: chrX:41027031-41027383 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 122

Conread position: 1-361
Cow position: chrX:4399003-4399342 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 40, 72

Conread position: 1-361
Cow position: chrX:5118628-5118274 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 247
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 40, 95

Conread position: 1-361
Cow position: chrX:7351173-7351525 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 265
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 40, 118

Conread position: 1-361
Cow position: chrX:7721863-7722198 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 253
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 40, 116

Conread position: 1-361
Cow position: chrX:9252301-9251939 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 246
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 93, 46

Conread position: 1-361
Cow position: chrX:27206672-27207018 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 246
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 68

Conread position: 1-361
Cow position: chrX:27442678-27442314 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 245
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 40, 22

Conread position: 1-361
Cow position: chrX:27509146-27508800 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 261
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 184, 40

Conread position: 1-361
Cow position: chrX:31729317-31729661 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 50

Conread position: 1-361
Cow position: chrX:33466485-33466846 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 50

Conread position: 1-361
Cow position: chrX:34411718-34412072 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 257
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 40, 28

Conread position: 1-361
Cow position: chrX:38963980-38964321 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 8

Conread position: 1-361
Cow position: chrX:42492641-42492297 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 265
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 39, 73

Conread position: 1-361
Cow position: chrX:44961625-44961979 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 255
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 41, 14

Conread position: 1-361
Cow position: chrX:46532632-46532266 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 254
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 36, 126

Conread position: 1-362
Cow position: chrX:5017540-5017191 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 241
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 167

Conread position: 1-362
Cow position: chrX:38218585-38218938 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 94

Conread position: 1-362
Cow position: chrX:46072943-46072605 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 253
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 41, 16

Conread position: 1-363
Cow position: chrX:15007276-15006933 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 122

Conread position: 1-367
Cow position: chrX:1616170-1615828 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 259
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 41, 128

Conread position: 1-368
Cow position: chrX:1499539-1499885 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 82

Conread position: 1-368
Cow position: chrX:11633552-11633913 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 156

Conread position: 1-368
Cow position: chrX:29601955-29601598 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 280
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 41, 8

Conread position: 1-369
Cow position: chrX:22074674-22075027 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 262
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 40, 80

Conread position: 1-369
Cow position: chrX:34238594-34238956 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 268
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 36, 65

Conread position: 1-371
Cow position: chrX:7646130-7646470 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 258
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 40, 73

Conread position: 1-371
Cow position: chrX:8925575-8925914 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 264
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 37, 135

Conread position: 1-371
Cow position: chrX:20584197-20584548 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 264
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 9, 114

Conread position: 1-371
Cow position: chrX:40035566-40035208 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 12

Conread position: 1-371
Cow position: chrX:40567477-40567839 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 78

Conread position: 1-376
Cow position: chrX:11655966-11656317 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 261
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 40, 69

Conread position: 1-376
Cow position: chrX:34441578-34441214 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 254
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 36, 72

Conread position: 1-376
Cow position: chrX:34565157-34565524 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 41

Conread position: 1-376
Cow position: chrX:41879058-41878698 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 257
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 41, 74

Conread position: 1-394
Cow position: chrX:12979953-12979580 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 259
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 40, 80

Conread position: 1-396
Cow position: chrX:30133451-30133066 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 273
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 9, 124

Conread position: 2-110
Cow position: chrX:32020247-32020135 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 2-114
Cow position: chrX:35609863-35609977 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 2-114
Cow position: chrX:37048701-37048589 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 2-114
Cow position: chrX:42282306-42282416 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 2-114
Cow position: chrX:42994491-42994601 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 60

Conread position: 2-117
Cow position: chrX:17662718-17662601 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 99
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 2-121
Cow position: chrX:44396894-44397013 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 2-124
Cow position: chrX:36355990-36356112 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 72

Conread position: 2-274
Cow position: chrX:47481675-47481928 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 122

Conread position: 2-353
Cow position: chrX:1055518-1055165 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 235
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 178, 116

Conread position: 2-353
Cow position: chrX:8730962-8731310 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 243
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 40, 5

Conread position: 2-360
Cow position: chrX:23563918-23563567 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 247
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 41, 113

Conread position: 2-361
Cow position: chrX:3579819-3580169 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 253
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 41, 87

Conread position: 2-361
Cow position: chrX:16541799-16541432 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 244
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 40, 107

Conread position: 2-361
Cow position: chrX:21593162-21593515 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 246
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 40, 123

Conread position: 2-361
Cow position: chrX:38549327-38549671 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 40

Conread position: 2-365
Cow position: chrX:17794860-17795207 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 248
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 39, 23

Conread position: 2-371
Cow position: chrX:24365950-24365588 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 256
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 36, 23

Conread position: 2-371
Cow position: chrX:25816025-25815664 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 262
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 293, 40

Conread position: 2-412
Cow position: chrX:21986417-21986027 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 278
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 39, 112

Conread position: 2-519
Cow position: chrX:7571779-7572289 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 339
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 255, 114

Conread position: 3-291
Cow position: chrX:33639847-33640124 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 36, 63

Conread position: 3-299
Cow position: chrX:9365799-9365519 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 207
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 34, 102

Conread position: 3-349
Cow position: chrX:27946183-27945841 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 235
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 39, 120

Conread position: 3-361
Cow position: chrX:12249679-12250039 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 262
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 34, 53

Conread position: 3-361
Cow position: chrX:38094647-38094302 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 116

Conread position: 3-371
Cow position: chrX:40685455-40685096 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 259
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 43, 111

Conread position: 3-376
Cow position: chrX:36975825-36976187 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 263
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 34, 81

Conread position: 4-117
Cow position: chrX:24288047-24287937 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 4-121
Cow position: chrX:20790798-20790916 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 4-121
Cow position: chrX:40647864-40647981 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 16

Conread position: 4-353
Cow position: chrX:10831616-10831265 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 234
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 36, 152

Conread position: 4-361
Cow position: chrX:41870950-41871281 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 237
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 37, 67

Conread position: 5-114
Cow position: chrX:45598722-45598613 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 8-110
Cow position: chrX:27516409-27516513 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 8-317
Cow position: chrX:34532402-34532698 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 213
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 86

Conread position: 9-113
Cow position: chrX:30832965-30832862 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 32, 72

Conread position: 9-114
Cow position: chrX:17908404-17908300 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 62

Conread position: 9-114
Cow position: chrX:19188819-19188926 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 9-361
Cow position: chrX:41238485-41238138 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 243
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 142, 32

Conread position: 9-361
Cow position: chrX:41790562-41790203 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 244
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 35, 59

Conread position: 9-362
Cow position: chrX:34315407-34315752 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 258
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 171, 32

Conread position: 9-369
Cow position: chrX:42247303-42246949 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 273
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 174, 59

Conread position: 9-370
Cow position: chrX:5680053-5679697 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 69

Conread position: 10-426
Cow position: chrX:35885847-35885445 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 286
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 32, 97

Conread position: 12-113
Cow position: chrX:1503223-1503323 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 69

Conread position: 12-370
Cow position: chrX:28013563-28013202 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 244
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 106

Conread position: 14-113
Cow position: chrX:23497781-23497681 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 14-114
Cow position: chrX:32747570-32747672 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 14-378
Cow position: chrX:26881681-26881322 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 115

Conread position: 15-274
Cow position: chrX:39558462-39558217 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 26, 108

Conread position: 15-291
Cow position: chrX:42235640-42235376 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 28, 109

Conread position: 15-376
Cow position: chrX:6407437-6407783 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 259
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 27, 49

Conread position: 15-376
Cow position: chrX:46587705-46588059 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 258
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 28, 105

Conread position: 17-361
Cow position: chrX:40336790-40337135 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 237
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 22, 17

Conread position: 18-371
Cow position: chrX:44657072-44656725 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 236
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 18, 101

Conread position: 19-113
Cow position: chrX:42461852-42461757 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 20-114
Cow position: chrX:35848454-35848548 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 55

Conread position: 22-114
Cow position: chrX:28845725-28845820 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 85
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 22-368
Cow position: chrX:31515066-31515403 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 242
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 87, 7

Conread position: 25-114
Cow position: chrX:16348672-16348580 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 25-361
Cow position: chrX:16764052-16763706 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 225
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 32, 95

Conread position: 25-375
Cow position: chrX:32330056-32330410 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 244
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 34

Conread position: 26-361
Cow position: chrX:21327802-21328138 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 240
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 13, 94

Conread position: 31-359
Cow position: chrX:42855360-42855685 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 242
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 258, 62

Conread position: 31-369
Cow position: chrX:34222619-34222944 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 239
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 133, 85

Conread position: 32-362
Cow position: chrX:38560462-38560775 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 226
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 9, 75

Conread position: 36-361
Cow position: chrX:161323-161624 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 36-362
Cow position: chrX:151815-152130 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 233
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 257, 65

Conread position: 37-360
Cow position: chrX:31489431-31489744 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 228
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 238, 63

Conread position: 38-361
Cow position: chrX:40680523-40680839 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 237
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 126, 78

Conread position: 38-375
Cow position: chrX:17231646-17231975 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 233
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 108, 29

Conread position: 48-318
Cow position: chrX:23113200-23113464 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 74, 25

Conread position: 48-327
Cow position: chrX:4515606-4515878 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 209
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 108, 86

Conread position: 48-361
Cow position: chrX:4153113-4152820 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 213
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 69, 0

Conread position: 57-376
Cow position: chrX:35413525-35413833 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 213
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 131, 19

Conread position: 59-361
Cow position: chrX:13121863-13122168 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 211
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 47, 88

Conread position: 65-362
Cow position: chrX:20678216-20677917 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 224
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 6, 59

Conread position: 66-361
Cow position: chrX:39352720-39352996 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 204
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 85-361
Cow position: chrX:42893875-42894146 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 6, 38

Conread position: 109-335
Cow position: chrX:169590-169343 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 129-353
Cow position: chrX:14986171-14985946 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 62, 23

Conread position: 130-361
Cow position: chrX:35985802-35986039 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 21, 134

Conread position: 133-361
Cow position: chrX:16836304-16836070 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 27

Conread position: 134-371
Cow position: chrX:9651041-9650794 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 7

Conread position: 136-373
Cow position: chrX:35275972-35276222 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 47, 19

Conread position: 137-289
Cow position: chrX:23498690-23498533 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 54, 15

Conread position: 137-358
Cow position: chrX:31436461-31436690 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 24, 0

Conread position: 137-369
Cow position: chrX:47345319-47345562 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 18

Conread position: 137-370
Cow position: chrX:25441543-25441325 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 48, 0

Conread position: 138-362
Cow position: chrX:1466154-1466388 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 39, 0

Conread position: 138-371
Cow position: chrX:29050235-29050477 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 202

Conread position: 138-381
Cow position: chrX:35268854-35269100 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 44, 17

Conread position: 139-371
Cow position: chrX:34837071-34836836 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 37, 142

Conread position: 140-361
Cow position: chrX:38587854-38587621 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 13

Conread position: 140-369
Cow position: chrX:17956681-17956921 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 48, 18

Conread position: 141-346
Cow position: chrX:35542880-35543093 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 141-360
Cow position: chrX:31442838-31442616 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 175
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 41, 14

Conread position: 141-363
Cow position: chrX:20881952-20881735 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 19, 90

Conread position: 141-366
Cow position: chrX:44397004-44397240 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 41, 17

Conread position: 141-371
Cow position: chrX:14973754-14973523 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 177
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 17, 142

Conread position: 141-377
Cow position: chrX:17966329-17966569 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 152

Conread position: 142-361
Cow position: chrX:41526530-41526310 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 40, 19

Conread position: 142-370
Cow position: chrX:1088148-1087915 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 41, 13

Conread position: 142-370
Cow position: chrX:29229994-29230240 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 142-371
Cow position: chrX:41123051-41123279 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 41, 144

Conread position: 143-276
Cow position: chrX:1514423-1514285 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 143-361
Cow position: chrX:5134464-5134698 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 32

Conread position: 143-369
Cow position: chrX:29733603-29733352 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 17, 218

Conread position: 143-374
Cow position: chrX:6544254-6544482 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 62

Conread position: 144-361
Cow position: chrX:20957242-20957461 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 20, 31

Conread position: 144-380
Cow position: chrX:28923036-28923266 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 190, 11

Conread position: 146-361
Cow position: chrX:11763008-11762787 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 175
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 42, 141

Conread position: 147-299
Cow position: chrX:16348571-16348414 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 125

Conread position: 147-365
Cow position: chrX:39220074-39220316 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 36, 11

Conread position: 148-329
Cow position: chrX:18964827-18964633 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 43, 11

Conread position: 148-360
Cow position: chrX:20887644-20887426 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 40, 195

Conread position: 148-370
Cow position: chrX:11614694-11614908 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 10

Conread position: 148-371
Cow position: chrX:3806677-3806912 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 182
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 33, 0

Conread position: 148-381
Cow position: chrX:126767-127007 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 41, 134

Conread position: 149-345
Cow position: chrX:41068720-41068928 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 149-361
Cow position: chrX:30337955-30337730 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 10

Conread position: 150-330
Cow position: chrX:23188783-23188596 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 150-356
Cow position: chrX:42836178-42836400 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 150-374
Cow position: chrX:7277907-7278143 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 8, 196

Conread position: 151-385
Cow position: chrX:30420944-30420717 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 11, 36

Conread position: 155-295
Cow position: chrX:22915038-22914889 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 31, 96

Conread position: 156-361
Cow position: chrX:47100582-47100370 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 23, 35

Conread position: 158-289
Cow position: chrX:6463616-6463745 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 158-291
Cow position: chrX:18046406-18046545 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 89

Conread position: 158-291
Cow position: chrX:23562637-23562781 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 158-308
Cow position: chrX:1337274-1337126 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 158-328
Cow position: chrX:31252422-31252599 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 143
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 24, 79

Conread position: 158-359
Cow position: chrX:42086851-42087048 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 137, 26

Conread position: 158-361
Cow position: chrX:4559744-4559958 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 33, 0

Conread position: 158-361
Cow position: chrX:23335967-23335751 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 95

Conread position: 158-361
Cow position: chrX:29451537-29451321 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 158-361
Cow position: chrX:29478729-29478946 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 70

Conread position: 158-361
Cow position: chrX:35390734-35390539 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 45

Conread position: 158-361
Cow position: chrX:36356117-36356328 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 36, 27

Conread position: 158-361
Cow position: chrX:42450009-42449789 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 25, 0

Conread position: 158-371
Cow position: chrX:15147188-15146966 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 23, 186

Conread position: 158-380
Cow position: chrX:32877362-32877136 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 29, 184

Conread position: 158-394
Cow position: chrX:1122538-1122290 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 197

Conread position: 159-384
Cow position: chrX:27175009-27175247 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 161-354
Cow position: chrX:47061412-47061603 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 9

Conread position: 161-361
Cow position: chrX:17744650-17744845 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 25, 13

Conread position: 161-365
Cow position: chrX:4768749-4768955 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 44, 196

Conread position: 161-374
Cow position: chrX:16324006-16323778 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 27, 0

Conread position: 163-290
Cow position: chrX:27667443-27667573 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 163-362
Cow position: chrX:34314041-34314246 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 19, 0

Conread position: 168-361
Cow position: chrX:6389106-6389303 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 23, 65

Conread position: 172-361
Cow position: chrX:41858854-41858660 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 172-371
Cow position: chrX:51871-51666 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 114, 0

Conread position: 176-328
Cow position: chrX:24277348-24277503 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 9

Conread position: 176-361
Cow position: chrX:14951316-14951129 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 98, 12

Conread position: 177-329
Cow position: chrX:40543487-40543336 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 125
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 18, 83

Conread position: 177-361
Cow position: chrX:14135713-14135899 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 11, 29

Conread position: 177-361
Cow position: chrX:32747766-32747944 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 149
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 14, 119

Conread position: 177-371
Cow position: chrX:36367900-36367699 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 109, 0

Conread position: 179-361
Cow position: chrX:1101594-1101774 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 101, 0

Conread position: 179-371
Cow position: chrX:39180196-39179995 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 109, 64

Conread position: 179-381
Cow position: chrX:8759663-8759868 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 81, 49

Conread position: 181-353
Cow position: chrX:1360129-1360298 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 181-356
Cow position: chrX:42432470-42432295 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 14, 43

Conread position: 181-363
Cow position: chrX:34270601-34270787 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 7, 17

Conread position: 181-370
Cow position: chrX:11653808-11654000 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 151
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 10, 0

Conread position: 181-376
Cow position: chrX:37867469-37867672 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 182-331
Cow position: chrX:29688135-29687981 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 99, 78

Conread position: 182-352
Cow position: chrX:46070130-46069970 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 182-355
Cow position: chrX:30824029-30824203 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 104, 0

Conread position: 182-357
Cow position: chrX:31480011-31480186 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 84, 36

Conread position: 182-360
Cow position: chrX:7911032-7910850 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 58, 174

Conread position: 182-361
Cow position: chrX:4632818-4632630 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 182-361
Cow position: chrX:9201588-9201767 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 149, 110

Conread position: 182-361
Cow position: chrX:13177436-13177260 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 137, 142

Conread position: 182-361
Cow position: chrX:16984681-16984859 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 78, 0

Conread position: 182-361
Cow position: chrX:22115277-22115090 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 113, 94

Conread position: 182-361
Cow position: chrX:23359071-23358893 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 107, 22

Conread position: 182-361
Cow position: chrX:27668918-27668738 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 144
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 113, 139

Conread position: 182-361
Cow position: chrX:32866915-32867094 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 182-361
Cow position: chrX:36283380-36283564 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 92, 79

Conread position: 182-361
Cow position: chrX:42381072-42380888 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 106, 158

Conread position: 182-371
Cow position: chrX:20339852-20339662 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 113, 56

Conread position: 182-371
Cow position: chrX:42479873-42480064 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 150, 100

Conread position: 182-373
Cow position: chrX:2314579-2314380 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 85, 80

Conread position: 182-373
Cow position: chrX:28940282-28940480 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 183-361
Cow position: chrX:27202611-27202793 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 184-361
Cow position: chrX:4444462-4444652 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 184-362
Cow position: chrX:19394593-19394780 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 10, 0

Conread position: 184-368
Cow position: chrX:45598563-45598377 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 115, 0

Conread position: 184-371
Cow position: chrX:40556419-40556228 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 22, 111

Conread position: 186-335
Cow position: chrX:14275699-14275550 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 187-290
Cow position: chrX:31829416-31829313 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 187-291
Cow position: chrX:28876555-28876660 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 187-298
Cow position: chrX:23860949-23860837 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 187-298
Cow position: chrX:28878129-28878018 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 187-299
Cow position: chrX:43730179-43730067 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 97
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 187-306
Cow position: chrX:37062540-37062420 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 187-346
Cow position: chrX:28850772-28850927 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 187-348
Cow position: chrX:3860587-3860438 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 187-348
Cow position: chrX:19795459-19795298 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 67

Conread position: 187-348
Cow position: chrX:31294527-31294358 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 137
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 97, 0

Conread position: 187-352
Cow position: chrX:19469461-19469300 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 187-352
Cow position: chrX:32420257-32420426 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 187-352
Cow position: chrX:37749938-37749777 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 187-353
Cow position: chrX:16762816-16762984 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 53, 80

Conread position: 187-353
Cow position: chrX:31986529-31986356 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 39, 0

Conread position: 187-353
Cow position: chrX:41810123-41809959 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 106, 0

Conread position: 187-354
Cow position: chrX:13868747-13868921 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 187-354
Cow position: chrX:27261236-27261407 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 21, 155

Conread position: 187-354
Cow position: chrX:34420779-34420953 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 101, 0

Conread position: 187-354
Cow position: chrX:44995543-44995717 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 187-357
Cow position: chrX:11326052-11325888 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 187-357
Cow position: chrX:32318350-32318520 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 10, 145

Conread position: 187-357
Cow position: chrX:41414768-41414930 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 187-359
Cow position: chrX:36866218-36866395 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 99, 61

Conread position: 187-359
Cow position: chrX:42331329-42331495 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 89, 0

Conread position: 187-360
Cow position: chrX:35681612-35681790 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 97, 0

Conread position: 187-360
Cow position: chrX:48822297-48822119 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 99, 0

Conread position: 187-361
Cow position: chrX:5026301-5026475 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 146, 89

Conread position: 187-361
Cow position: chrX:12095727-12095547 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 108, 0

Conread position: 187-361
Cow position: chrX:13923909-13924085 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 101, 0

Conread position: 187-361
Cow position: chrX:17524339-17524159 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 101, 0

Conread position: 187-361
Cow position: chrX:20583711-20583884 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 108, 147

Conread position: 187-361
Cow position: chrX:23471821-23471644 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 187-361
Cow position: chrX:24331821-24332001 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 60, 65

Conread position: 187-361
Cow position: chrX:27270420-27270593 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 50, 138

Conread position: 187-361
Cow position: chrX:27431873-27431700 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 108, 147

Conread position: 187-361
Cow position: chrX:27446731-27446907 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 101, 0

Conread position: 187-361
Cow position: chrX:35285218-35285398 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 108, 0

Conread position: 187-361
Cow position: chrX:35392249-35392081 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 187-361
Cow position: chrX:35409797-35409976 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 108, 65

Conread position: 187-361
Cow position: chrX:41453347-41453523 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 112, 0

Conread position: 187-361
Cow position: chrX:44054847-44055027 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 108, 0

Conread position: 187-361
Cow position: chrX:45412194-45412019 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 187-361
Cow position: chrX:46068714-46068540 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 99, 161

Conread position: 187-361
Cow position: chrX:48558791-48558970 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 95, 139

Conread position: 187-362
Cow position: chrX:42875257-42875434 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 148
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 111, 0

Conread position: 187-365
Cow position: chrX:35382991-35382814 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 36, 0

Conread position: 187-366
Cow position: chrX:27511473-27511650 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 99, 0

Conread position: 187-368
Cow position: chrX:2551136-2551308 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 31, 105

Conread position: 187-369
Cow position: chrX:907991-908173 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 68, 40

Conread position: 187-369
Cow position: chrX:23136785-23136963 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 97, 106

Conread position: 187-370
Cow position: chrX:12437225-12437050 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 187-370
Cow position: chrX:26205403-26205217 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 60, 65

Conread position: 187-370
Cow position: chrX:27075006-27074818 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 150
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 91, 0

Conread position: 187-370
Cow position: chrX:27145649-27145832 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 187-370
Cow position: chrX:27170784-27170967 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 136

Conread position: 187-370
Cow position: chrX:27415535-27415355 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 108, 0

Conread position: 187-371
Cow position: chrX:22392939-22392754 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 110, 80

Conread position: 187-371
Cow position: chrX:24170684-24170491 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 91, 51

Conread position: 187-371
Cow position: chrX:27705631-27705822 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 95, 142

Conread position: 187-373
Cow position: chrX:19018786-19018592 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 105, 0

Conread position: 187-374
Cow position: chrX:40648939-40649140 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 155
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 22, 0

Conread position: 187-376
Cow position: chrX:12290764-12290957 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 101, 0

Conread position: 187-376
Cow position: chrX:17498367-17498562 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 101, 0

Conread position: 187-376
Cow position: chrX:46909860-46910047 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 145, 0

Conread position: 187-377
Cow position: chrX:8642091-8642290 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 99, 44

Conread position: 187-377
Cow position: chrX:45759716-45759910 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 101, 0

Conread position: 187-378
Cow position: chrX:24749133-24749328 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 91, 17

Conread position: 187-383
Cow position: chrX:20168603-20168804 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 79, 151

Conread position: 187-385
Cow position: chrX:32910149-32910346 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 110, 50

Conread position: 188-299
Cow position: chrX:7107548-7107658 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 188-346
Cow position: chrX:25049053-25048893 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 113, 9

Conread position: 188-361
Cow position: chrX:37867299-37867478 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 107, 0

Conread position: 188-369
Cow position: chrX:36569010-36568822 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 188-370
Cow position: chrX:41166779-41166596 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 94, 0

Conread position: 189-351
Cow position: chrX:42282624-42282791 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 98, 45

Conread position: 190-288
Cow position: chrX:30831285-30831187 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 190-349
Cow position: chrX:12309338-12309173 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 190-350
Cow position: chrX:47379073-47378917 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 190-350
Cow position: chrX:47755992-47755831 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 97, 32

Conread position: 190-353
Cow position: chrX:4645865-4645698 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 56, 62

Conread position: 190-360
Cow position: chrX:29467730-29467559 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 107, 0

Conread position: 190-361
Cow position: chrX:597426-597254 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 98, 41

Conread position: 190-361
Cow position: chrX:4109232-4109409 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 190-361
Cow position: chrX:34792263-34792099 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 190-361
Cow position: chrX:41454906-41454729 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 62

Conread position: 190-362
Cow position: chrX:27306502-27306664 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 190-362
Cow position: chrX:31744956-31744790 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 97, 0

Conread position: 190-364
Cow position: chrX:10516301-10516481 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 105, 0

Conread position: 190-368
Cow position: chrX:44123303-44123479 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 121, 0

Conread position: 190-369
Cow position: chrX:41674152-41674329 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 125
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 76, 149

Conread position: 190-371
Cow position: chrX:5487891-5487712 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 173, 102

Conread position: 190-371
Cow position: chrX:23108089-23108261 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 190-371
Cow position: chrX:42461570-42461393 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 190-371
Cow position: chrX:42539607-42539781 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 190-372
Cow position: chrX:8326952-8327140 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 98, 0

Conread position: 190-372
Cow position: chrX:23497643-23497462 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 146
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 82, 0

Conread position: 190-373
Cow position: chrX:45429974-45429796 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 92, 0

Conread position: 190-374
Cow position: chrX:42311719-42311889 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 28

Conread position: 190-375
Cow position: chrX:4825784-4825609 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 180, 32

Conread position: 190-375
Cow position: chrX:6640475-6640663 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 13, 9

Conread position: 190-380
Cow position: chrX:38642297-38642487 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 109, 86

Conread position: 190-388
Cow position: chrX:40116530-40116721 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 190, 20

Conread position: 190-391
Cow position: chrX:38301857-38302069 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 167
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 98, 182

Conread position: 190-395
Cow position: chrX:32574365-32574571 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 105, 165

Conread position: 191-299
Cow position: chrX:25282989-25282880 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 191-353
Cow position: chrX:10237864-10237697 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 191-353
Cow position: chrX:38208496-38208338 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 191-357
Cow position: chrX:25286672-25286502 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 67, 13

Conread position: 191-359
Cow position: chrX:25035333-25035159 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 191-361
Cow position: chrX:1938063-1938237 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 191-361
Cow position: chrX:1960376-1960201 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 102, 0

Conread position: 191-361
Cow position: chrX:2936006-2936177 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 104, 85

Conread position: 191-361
Cow position: chrX:14925325-14925497 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 100, 13

Conread position: 191-361
Cow position: chrX:16556168-16555999 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 191-361
Cow position: chrX:19717570-19717735 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 191-361
Cow position: chrX:19761803-19761973 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 191-361
Cow position: chrX:25207806-25207637 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 93, 47

Conread position: 191-361
Cow position: chrX:25925593-25925432 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 191-361
Cow position: chrX:34376991-34377163 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 96, 0

Conread position: 191-361
Cow position: chrX:41941672-41941847 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 95, 124

Conread position: 191-371
Cow position: chrX:5097750-5097560 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 31, 163

Conread position: 191-371
Cow position: chrX:20345499-20345685 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 191-371
Cow position: chrX:30962828-30962641 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 191-371
Cow position: chrX:33654795-33654609 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 104, 0

Conread position: 191-374
Cow position: chrX:33000954-33001135 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 75, 99

Conread position: 191-375
Cow position: chrX:15545931-15546119 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 76, 71

Conread position: 191-375
Cow position: chrX:28067899-28068089 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 104, 0

Conread position: 191-375
Cow position: chrX:43008658-43008848 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 102, 0

Conread position: 191-376
Cow position: chrX:42927775-42927592 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 104, 116

Conread position: 191-381
Cow position: chrX:11454235-11454422 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 116, 52

Conread position: 191-381
Cow position: chrX:37752057-37751867 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 95, 113

Conread position: 191-396
Cow position: chrX:46793697-46793489 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 95, 85

Conread position: 191-401
Cow position: chrX:11781302-11781509 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 95, 64

Conread position: 192-350
Cow position: chrX:48118683-48118523 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 88, 71

Conread position: 192-361
Cow position: chrX:12800-12967 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 192-361
Cow position: chrX:4269014-4268846 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 192-361
Cow position: chrX:19356520-19356688 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 103, 24

Conread position: 192-362
Cow position: chrX:40108468-40108288 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 107, 0

Conread position: 192-381
Cow position: chrX:46533255-46533061 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 103, 169

Conread position: 193-359
Cow position: chrX:41010949-41011112 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 193-361
Cow position: chrX:4328132-4327958 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 102, 69

Conread position: 193-370
Cow position: chrX:42760303-42760486 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 95, 0

Conread position: 193-381
Cow position: chrX:26979738-26979547 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 88, 32

Conread position: 194-359
Cow position: chrX:39290411-39290577 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 99, 77

Conread position: 194-361
Cow position: chrX:34991416-34991585 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 101, 0

Conread position: 194-371
Cow position: chrX:44798996-44798817 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 11

Conread position: 194-375
Cow position: chrX:4169979-4169790 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 95, 68

Conread position: 195-331
Cow position: chrX:41862416-41862554 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 195-371
Cow position: chrX:6599729-6599540 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 195-372
Cow position: chrX:47191267-47191087 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 196-376
Cow position: chrX:15100037-15100217 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 84, 66

Conread position: 197-361
Cow position: chrX:28106902-28107070 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 71, 67

Conread position: 197-362
Cow position: chrX:6480541-6480370 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 197-371
Cow position: chrX:41199279-41199460 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 198-361
Cow position: chrX:4289500-4289658 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 198-361
Cow position: chrX:5915244-5915415 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 199-371
Cow position: chrX:17525810-17525641 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 164, 95

Conread position: 201-361
Cow position: chrX:26882021-26881855 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 98, 0

Conread position: 201-376
Cow position: chrX:11602424-11602248 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 91, 23

Conread position: 202-357
Cow position: chrX:11529403-11529558 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 202-361
Cow position: chrX:35658856-35659018 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 91, 136

Conread position: 202-361
Cow position: chrX:41215382-41215547 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 204-361
Cow position: chrX:11589305-11589143 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 89, 0

Conread position: 204-361
Cow position: chrX:22552917-22552755 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 43, 48

Conread position: 204-371
Cow position: chrX:30042029-30041855 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 204-378
Cow position: chrX:4750270-4750097 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 76, 49

Conread position: 205-361
Cow position: chrX:10252137-10251978 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 206-361
Cow position: chrX:9451409-9451565 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 62, 41

Conread position: 206-371
Cow position: chrX:3494981-3494816 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 135
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 86, 25

Conread position: 208-370
Cow position: chrX:24633761-24633929 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 212-353
Cow position: chrX:39094252-39094117 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 212-360
Cow position: chrX:37717794-37717945 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 12

Conread position: 213-359
Cow position: chrX:25420402-25420546 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 132, 80

Conread position: 213-368
Cow position: chrX:39419643-39419489 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 145, 82

Conread position: 215-373
Cow position: chrX:4486951-4486788 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 217-361
Cow position: chrX:35029851-35029712 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 222-381
Cow position: chrX:1996372-1996206 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 223-361
Cow position: chrX:31279843-31279703 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 225-328
Cow position: chrX:21173-21280 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 225-369
Cow position: chrX:43028315-43028461 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 71, 0

Conread position: 225-373
Cow position: chrX:13135471-13135317 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 225-375
Cow position: chrX:11670769-11670925 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 226-371
Cow position: chrX:40108259-40108107 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 226-409
Cow position: chrX:14900418-14900242 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 64, 53

Conread position: 227-369
Cow position: chrX:1571504-1571364 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 73, 0

Conread position: 234-376
Cow position: chrX:26956460-26956322 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 235-424
Cow position: chrX:22284783-22284973 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 142, 61

Conread position: 242-373
Cow position: chrX:13892917-13893042 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 243-384
Cow position: chrX:38727037-38726895 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 120, 68

Conread position: 263-383
Cow position: chrX:33865175-33865052 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 18, 103

Conread position: 338-522
Cow position: chrX:16301376-16301190 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 90

Conread position: 368-525
Cow position: chrX:33829790-33829948 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 68, 134

Conread position: 369-525
Cow position: chrX:2382212-2382370 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 20, 134

Show alignments to all cow chromosomes.