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Cow genome map

           
Conread name:
           
Ova1-OVRM10125H10
        

               
Conread position:
               
1-131
               

               
Cow position:
               
chr13:17815900-17815772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
1-150
               

               
Cow position:
               
chr13:21189409-21189260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
118, 140
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr13:20863884-20864043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
128, 35
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr13:3701569-3701408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr13:52922224-52922050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr13:13265939-13265759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr13:20440457-20440636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr13:37521248-37521432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr13:55295491-55295693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
166, 142
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr13:12618982-12619186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr13:890040-890256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr13:15528900-15529147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
201, 146
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr13:17966077-17966328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 110
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr13:37484142-37484398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
108, 85
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr13:15903148-15902902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr13:10928862-10929118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 14
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr13:31814003-31813747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 80
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr13:21176190-21176449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:48037753-48037492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr13:11460753-11460501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr13:53566727-53566464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr13:17439638-17439907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr13:40943376-40943104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
125, 107
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr13:46181921-46181652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
36, 22
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr13:547617-547355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
31, 78
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr13:55316057-55316339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 149
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr13:17800204-17799928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
131, 58
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr13:18696974-18696694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 33
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr13:34263237-34263556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 102
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr13:11808690-11808383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
318, 62
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr13:13320916-13320588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 47
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr13:19022407-19022055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 148
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr13:27525133-27525469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 112
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr13:311562-311220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
256, 106
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr13:8374640-8374973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 113
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr13:21241961-21242288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 58
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr13:45023080-45023435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 93
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr13:23667387-23667044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 34
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:13261136-13260777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 151
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:19882906-19883248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 11
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:24715376-24715035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
35, 60
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:47007598-47007927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 58
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:56686564-56686229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 58
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr13:38329758-38329402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 153
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr13:13089151-13088814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 47
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr13:17568967-17569315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 145
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr13:20820704-20821055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 93
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr13:23960681-23961025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 112
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr13:17821136-17821479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 113
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr13:34728705-34729061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
44, 154
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr13:46525313-46525649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
19, 77
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr13:54702319-54701961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 113
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr13:17114247-17114606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 21
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr13:24369712-24369364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 66
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr13:52199218-52198881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
316, 125
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr13:12670316-12670677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 56
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr13:21235555-21235892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 52
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr13:37818617-37818971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 149
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr13:17021597-17021950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 111
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr13:17745371-17745031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 55
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr13:17970896-17971265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
109, 87
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr13:152086-151739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
348, 80
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr13:15288797-15289146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 30
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr13:54583009-54582644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 149
               

               
Conread position:
               
1-365
               

               
Cow position:
               
chr13:20497781-20497410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
153, 31
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr13:20360402-20360042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
245, 54
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr13:20666257-20666613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 16
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr13:13501491-13501852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 35
               

               
Conread position:
               
2-224
               

               
Cow position:
               
chr13:21269449-21269670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 33
               

               
Conread position:
               
2-265
               

               
Cow position:
               
chr13:52284940-52284687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
59, 113
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr13:25547455-25547761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
268, 119
               

               
Conread position:
               
2-348
               

               
Cow position:
               
chr13:25496137-25495795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
30, 113
               

               
Conread position:
               
2-348
               

               
Cow position:
               
chr13:44278484-44278132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
9, 87
               

               
Conread position:
               
2-356
               

               
Cow position:
               
chr13:17292002-17292353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 111
               

               
Conread position:
               
2-361
               

               
Cow position:
               
chr13:25579056-25579419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
35, 65
               

               
Conread position:
               
2-362
               

               
Cow position:
               
chr13:13338991-13338628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 120
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chr13:1363824-1363615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
33, 60
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr13:18243993-18243761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
34, 113
               

               
Conread position:
               
3-239
               

               
Cow position:
               
chr13:8201356-8201586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
168, 32
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr13:6060880-6061128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr13:15166949-15166690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
106, 150
               

               
Conread position:
               
3-283
               

               
Cow position:
               
chr13:56148667-56148375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
34, 143
               

               
Conread position:
               
3-303
               

               
Cow position:
               
chr13:56155029-56155316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
3-335
               

               
Cow position:
               
chr13:15974744-15974417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 113
               

               
Conread position:
               
3-343
               

               
Cow position:
               
chr13:19393419-19393087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 39
               

               
Conread position:
               
3-350
               

               
Cow position:
               
chr13:1155578-1155922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
277, 54
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr13:21107268-21106920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
103, 68
               

               
Conread position:
               
3-361
               

               
Cow position:
               
chr13:47964067-47964402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
331, 48
               

               
Conread position:
               
3-364
               

               
Cow position:
               
chr13:33256626-33256268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
111, 38
               

               
Conread position:
               
3-365
               

               
Cow position:
               
chr13:55674079-55674438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 102
               

               
Conread position:
               
4-229
               

               
Cow position:
               
chr13:11954981-11955210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
83, 31
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr13:52929838-52929615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 70
               

               
Conread position:
               
4-238
               

               
Cow position:
               
chr13:8524492-8524720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
4-238
               

               
Cow position:
               
chr13:15110449-15110212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
33, 126
               

               
Conread position:
               
4-238
               

               
Cow position:
               
chr13:17622410-17622186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
4-238
               

               
Cow position:
               
chr13:20563125-20562891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 118
               

               
Conread position:
               
4-238
               

               
Cow position:
               
chr13:48375516-48375735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
4-252
               

               
Cow position:
               
chr13:6153653-6153900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
33, 112
               

               
Conread position:
               
4-255
               

               
Cow position:
               
chr13:9593637-9593387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
126, 146
               

               
Conread position:
               
4-261
               

               
Cow position:
               
chr13:13176779-13176525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
4-268
               

               
Cow position:
               
chr13:40722575-40722838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
27, 14
               

               
Conread position:
               
4-268
               

               
Cow position:
               
chr13:43762298-43762038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
4-279
               

               
Cow position:
               
chr13:49520693-49520965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
94, 88
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr13:20683992-20684277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
197, 112
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr13:56160301-56160592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
33, 142
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr13:2414159-2413882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
33, 112
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr13:15281808-15282079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
33, 113
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr13:60429945-60430226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 57
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr13:20706077-20706355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
4-289
               

               
Cow position:
               
chr13:11381593-11381878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 77
               

               
Conread position:
               
4-295
               

               
Cow position:
               
chr13:43184744-43185042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
102, 15
               

               
Conread position:
               
4-311
               

               
Cow position:
               
chr13:6086775-6087067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
166, 37
               

               
Conread position:
               
4-318
               

               
Cow position:
               
chr13:23479155-23478847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 13
               

               
Conread position:
               
4-320
               

               
Cow position:
               
chr13:17855499-17855184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
158, 32
               

               
Conread position:
               
4-320
               

               
Cow position:
               
chr13:24230341-24230026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
28, 107
               

               
Conread position:
               
4-336
               

               
Cow position:
               
chr13:11260398-11260075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 53
               

               
Conread position:
               
4-336
               

               
Cow position:
               
chr13:12207172-12206859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
188, 104
               

               
Conread position:
               
4-346
               

               
Cow position:
               
chr13:24754010-24753681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
33, 79
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr13:3315549-3315900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr13:17158746-17159096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
171, 110
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr13:18166862-18166518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 120
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr13:20839692-20839367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
60, 51
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr13:21275984-21275642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 56
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr13:26261669-26262006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
27, 116
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr13:34281805-34281467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 104
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr13:41806904-41806562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 146
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr13:60508990-60509339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
33, 69
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr13:2774256-2773900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
169, 112
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr13:29831304-29831642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
27, 115
               

               
Conread position:
               
4-352
               

               
Cow position:
               
chr13:26480084-26480422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
265, 106
               

               
Conread position:
               
4-352
               

               
Cow position:
               
chr13:49503403-49503756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 11
               

               
Conread position:
               
4-355
               

               
Cow position:
               
chr13:15195075-15195422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
44, 84
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr13:42114150-42113792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 105
               

               
Conread position:
               
4-358
               

               
Cow position:
               
chr13:44003851-44003476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
31, 357
               

               
Conread position:
               
4-358
               

               
Cow position:
               
chr13:58763503-58763833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
315, 61
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr13:11321487-11321826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
101, 142
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr13:20879702-20880052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
27, 53
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr13:37592809-37593171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
32, 127
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr13:21280358-21280729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
109, 132
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr13:43480186-43479835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 109
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr13:51528318-51528665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 54
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr13:51940865-51940517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
133, 110
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr13:52749349-52749691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
33, 66
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr13:52894276-52893922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
53, 37
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr13:55583325-55582967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
33, 114
               

               
Conread position:
               
4-364
               

               
Cow position:
               
chr13:6079290-6079633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
188, 104
               

               
Conread position:
               
4-364
               

               
Cow position:
               
chr13:26698368-26698723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 144
               

               
Conread position:
               
4-365
               

               
Cow position:
               
chr13:6616623-6616996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
110, 165
               

               
Conread position:
               
4-366
               

               
Cow position:
               
chr13:3160520-3160170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
184, 52
               

               
Conread position:
               
4-367
               

               
Cow position:
               
chr13:20174879-20174505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
27, 243
               

               
Conread position:
               
4-367
               

               
Cow position:
               
chr13:46112099-46111734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
32, 122
               

               
Conread position:
               
4-378
               

               
Cow position:
               
chr13:15869250-15868865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
155, 31
               

               
Conread position:
               
5-174
               

               
Cow position:
               
chr13:12682417-12682584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
125, 72
               

               
Conread position:
               
5-222
               

               
Cow position:
               
chr13:25062536-25062327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
184, 81
               

               
Conread position:
               
5-232
               

               
Cow position:
               
chr13:15234042-15233830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr13:25531660-25531892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
101, 144
               

               
Conread position:
               
5-260
               

               
Cow position:
               
chr13:1042833-1043095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 148
               

               
Conread position:
               
5-263
               

               
Cow position:
               
chr13:15144244-15144495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
14, 52
               

               
Conread position:
               
5-274
               

               
Cow position:
               
chr13:51115900-51116162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
131, 39
               

               
Conread position:
               
5-280
               

               
Cow position:
               
chr13:62518204-62518467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
5-284
               

               
Cow position:
               
chr13:23856340-23856064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
5-298
               

               
Cow position:
               
chr13:5082778-5082488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
266, 36
               

               
Conread position:
               
5-336
               

               
Cow position:
               
chr13:59170786-59170442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 109
               

               
Conread position:
               
5-337
               

               
Cow position:
               
chr13:48598038-48597706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
29, 151
               

               
Conread position:
               
5-343
               

               
Cow position:
               
chr13:20217260-20217607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 150
               

               
Conread position:
               
5-343
               

               
Cow position:
               
chr13:24586169-24585839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 53
               

               
Conread position:
               
5-345
               

               
Cow position:
               
chr13:15257254-15257578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 29
               

               
Conread position:
               
5-347
               

               
Cow position:
               
chr13:18852208-18851875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 142
               

               
Conread position:
               
5-348
               

               
Cow position:
               
chr13:6540184-6540515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
110, 20
               

               
Conread position:
               
5-348
               

               
Cow position:
               
chr13:34261362-34261021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
55, 114
               

               
Conread position:
               
5-348
               

               
Cow position:
               
chr13:35526083-35526408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 14
               

               
Conread position:
               
5-348
               

               
Cow position:
               
chr13:52055471-52055807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
49, 32
               

               
Conread position:
               
5-351
               

               
Cow position:
               
chr13:42200746-42200403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 60
               

               
Conread position:
               
5-356
               

               
Cow position:
               
chr13:20880798-20881143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
96, 144
               

               
Conread position:
               
5-358
               

               
Cow position:
               
chr13:28552724-28552359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
33, 119
               

               
Conread position:
               
5-359
               

               
Cow position:
               
chr13:19223773-19223426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
257, 109
               

               
Conread position:
               
5-360
               

               
Cow position:
               
chr13:20473563-20473900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 34
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr13:38283858-38284197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 63
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr13:44323028-44322666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 70
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr13:49022746-49023093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 50
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr13:53574098-53573752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 124
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr13:61976837-61977186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 118
               

               
Conread position:
               
5-362
               

               
Cow position:
               
chr13:5671464-5671814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 22
               

               
Conread position:
               
5-366
               

               
Cow position:
               
chr13:12989972-12989628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
43, 90
               

               
Conread position:
               
6-207
               

               
Cow position:
               
chr13:41253749-41253550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
123, 108
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr13:20784715-20784383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 50
               

               
Conread position:
               
6-347
               

               
Cow position:
               
chr13:15991100-15991443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
25, 113
               

               
Conread position:
               
7-197
               

               
Cow position:
               
chr13:10098865-10099049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
7-337
               

               
Cow position:
               
chr13:971767-972100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 143
               

               
Conread position:
               
7-361
               

               
Cow position:
               
chr13:15041346-15041703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
30, 109
               

               
Conread position:
               
8-200
               

               
Cow position:
               
chr13:16024716-16024525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
29, 106
               

               
Conread position:
               
8-203
               

               
Cow position:
               
chr13:626685-626490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
41, 111
               

               
Conread position:
               
8-238
               

               
Cow position:
               
chr13:25434995-25435225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
113, 98
               

               
Conread position:
               
8-276
               

               
Cow position:
               
chr13:52585896-52586177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
31, 155
               

               
Conread position:
               
8-283
               

               
Cow position:
               
chr13:11096302-11096036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 55
               

               
Conread position:
               
8-284
               

               
Cow position:
               
chr13:36771294-36771566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 56
               

               
Conread position:
               
8-337
               

               
Cow position:
               
chr13:37804004-37803676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
184, 69
               

               
Conread position:
               
8-348
               

               
Cow position:
               
chr13:12448867-12449195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
23, 106
               

               
Conread position:
               
8-348
               

               
Cow position:
               
chr13:15192765-15193103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
98, 121
               

               
Conread position:
               
8-348
               

               
Cow position:
               
chr13:25817647-25817315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 48
               

               
Conread position:
               
8-350
               

               
Cow position:
               
chr13:35659878-35659538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 108
               

               
Conread position:
               
8-354
               

               
Cow position:
               
chr13:14063397-14063741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 47
               

               
Conread position:
               
8-354
               

               
Cow position:
               
chr13:21287962-21288305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 38
               

               
Conread position:
               
8-361
               

               
Cow position:
               
chr13:2803594-2803258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
99, 32
               

               
Conread position:
               
8-361
               

               
Cow position:
               
chr13:5758216-5758558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
104, 119
               

               
Conread position:
               
9-198
               

               
Cow position:
               
chr13:30693829-30693652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
9-207
               

               
Cow position:
               
chr13:24376613-24376422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
121, 47
               

               
Conread position:
               
9-239
               

               
Cow position:
               
chr13:18835316-18835101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
9-271
               

               
Cow position:
               
chr13:11820716-11820463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
169, 10
               

               
Conread position:
               
9-335
               

               
Cow position:
               
chr13:48165301-48165624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
97, 56
               

               
Conread position:
               
9-336
               

               
Cow position:
               
chr13:20288454-20288136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 107
               

               
Conread position:
               
12-246
               

               
Cow position:
               
chr13:34555711-34555938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
100, 69
               

               
Conread position:
               
12-255
               

               
Cow position:
               
chr13:12202487-12202243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
114, 92
               

               
Conread position:
               
12-284
               

               
Cow position:
               
chr13:18172459-18172189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
12-284
               

               
Cow position:
               
chr13:20679469-20679192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 109
               

               
Conread position:
               
12-348
               

               
Cow position:
               
chr13:22085623-22085946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 135
               

               
Conread position:
               
12-348
               

               
Cow position:
               
chr13:60375367-60375702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 96
               

               
Conread position:
               
12-359
               

               
Cow position:
               
chr13:15958744-15958397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
19, 104
               

               
Conread position:
               
12-362
               

               
Cow position:
               
chr13:5910775-5911120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 139
               

               
Conread position:
               
12-366
               

               
Cow position:
               
chr13:20261204-20261564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
20, 63
               

               
Conread position:
               
13-343
               

               
Cow position:
               
chr13:1569043-1568725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
13-361
               

               
Cow position:
               
chr13:15872567-15872210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 101
               

               
Conread position:
               
13-361
               

               
Cow position:
               
chr13:20893517-20893870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
19, 62
               

               
Conread position:
               
14-297
               

               
Cow position:
               
chr13:7663305-7663582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
116, 71
               

               
Conread position:
               
14-332
               

               
Cow position:
               
chr13:18995247-18994924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
24, 136
               

               
Conread position:
               
14-350
               

               
Cow position:
               
chr13:14576325-14575998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
303, 65
               

               
Conread position:
               
14-359
               

               
Cow position:
               
chr13:12200968-12201327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 130
               

               
Conread position:
               
14-361
               

               
Cow position:
               
chr13:9906852-9906502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
139, 99
               

               
Conread position:
               
14-361
               

               
Cow position:
               
chr13:18058127-18058475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 135
               

               
Conread position:
               
14-361
               

               
Cow position:
               
chr13:19279209-19278871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 7
               

               
Conread position:
               
14-366
               

               
Cow position:
               
chr13:15194613-15194953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 227
               

               
Conread position:
               
15-262
               

               
Cow position:
               
chr13:15884902-15885148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
15-350
               

               
Cow position:
               
chr13:5060863-5060522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
15-371
               

               
Cow position:
               
chr13:21135782-21136150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 99
               

               
Conread position:
               
16-332
               

               
Cow position:
               
chr13:57494071-57494371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
112, 78
               

               
Conread position:
               
16-349
               

               
Cow position:
               
chr13:16247775-16247429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
17, 98
               

               
Conread position:
               
16-352
               

               
Cow position:
               
chr13:57002845-57002504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 98
               

               
Conread position:
               
16-361
               

               
Cow position:
               
chr13:28139683-28139354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 26
               

               
Conread position:
               
16-367
               

               
Cow position:
               
chr13:867244-866902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
137, 110
               

               
Conread position:
               
16-370
               

               
Cow position:
               
chr13:20157847-20157492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 96
               

               
Conread position:
               
17-268
               

               
Cow position:
               
chr13:8402171-8401924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
19-255
               

               
Cow position:
               
chr13:56678129-56677896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
14, 41
               

               
Conread position:
               
19-363
               

               
Cow position:
               
chr13:54388905-54389249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 100
               

               
Conread position:
               
21-361
               

               
Cow position:
               
chr13:6189504-6189826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 60
               

               
Conread position:
               
22-276
               

               
Cow position:
               
chr13:19320646-19320391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 120
               

               
Conread position:
               
22-349
               

               
Cow position:
               
chr13:34532818-34533144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
295, 219
               

               
Conread position:
               
24-188
               

               
Cow position:
               
chr13:32826347-32826510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
91, 101
               

               
Conread position:
               
26-320
               

               
Cow position:
               
chr13:20155107-20154822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
27, 51
               

               
Conread position:
               
28-352
               

               
Cow position:
               
chr13:12974907-12974597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
286, 18
               

               
Conread position:
               
30-337
               

               
Cow position:
               
chr13:46329501-46329806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
30-345
               

               
Cow position:
               
chr13:24693054-24692747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
242, 68
               

               
Conread position:
               
30-348
               

               
Cow position:
               
chr13:46516163-46515845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
70, 91
               

               
Conread position:
               
30-361
               

               
Cow position:
               
chr13:54128491-54128822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
54, 6
               

               
Conread position:
               
30-371
               

               
Cow position:
               
chr13:16038191-16038522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
287, 6
               

               
Conread position:
               
31-370
               

               
Cow position:
               
chr13:11821255-11820923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
32-331
               

               
Cow position:
               
chr13:16714161-16714463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
107, 64
               

               
Conread position:
               
33-276
               

               
Cow position:
               
chr13:50568317-50568545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
236, 83
               

               
Conread position:
               
38-352
               

               
Cow position:
               
chr13:18197508-18197825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 82
               

               
Conread position:
               
43-348
               

               
Cow position:
               
chr13:7332910-7333226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
123, 81
               

               
Conread position:
               
46-361
               

               
Cow position:
               
chr13:28291412-28291093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
67, 101
               

               
Conread position:
               
48-274
               

               
Cow position:
               
chr13:827327-827105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
217, 60
               

               
Conread position:
               
51-361
               

               
Cow position:
               
chr13:33601151-33601458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
16, 29
               

               
Conread position:
               
52-274
               

               
Cow position:
               
chr13:47022440-47022227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
52-361
               

               
Cow position:
               
chr13:52477565-52477871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 96
               

               
Conread position:
               
56-276
               

               
Cow position:
               
chr13:15460698-15460917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
18, 13
               

               
Conread position:
               
57-284
               

               
Cow position:
               
chr13:9981765-9981986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
57-353
               

               
Cow position:
               
chr13:39939491-39939784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
55, 99
               

               
Conread position:
               
58-337
               

               
Cow position:
               
chr13:19610490-19610767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
69, 16
               

               
Conread position:
               
59-224
               

               
Cow position:
               
chr13:50750980-50751144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 62
               

               
Conread position:
               
59-246
               

               
Cow position:
               
chr13:48862022-48862205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
141, 89
               

               
Conread position:
               
59-260
               

               
Cow position:
               
chr13:3989277-3989069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
76, 92
               

               
Conread position:
               
59-318
               

               
Cow position:
               
chr13:20871463-20871212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
78, 88
               

               
Conread position:
               
59-336
               

               
Cow position:
               
chr13:21127268-21127543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 37
               

               
Conread position:
               
59-342
               

               
Cow position:
               
chr13:20137898-20137609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
119, 65
               

               
Conread position:
               
59-350
               

               
Cow position:
               
chr13:10924839-10925140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
54, 94
               

               
Conread position:
               
59-351
               

               
Cow position:
               
chr13:20868682-20868960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
261, 31
               

               
Conread position:
               
59-352
               

               
Cow position:
               
chr13:21170604-21170310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 10
               

               
Conread position:
               
59-361
               

               
Cow position:
               
chr13:7149302-7149010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
54, 27
               

               
Conread position:
               
59-361
               

               
Cow position:
               
chr13:13196315-13196013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
55, 68
               

               
Conread position:
               
59-361
               

               
Cow position:
               
chr13:18299476-18299165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
110, 15
               

               
Conread position:
               
59-361
               

               
Cow position:
               
chr13:40491287-40490989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
189, 36
               

               
Conread position:
               
59-362
               

               
Cow position:
               
chr13:9975001-9975296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
5, 63
               

               
Conread position:
               
59-362
               

               
Cow position:
               
chr13:17498291-17497991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
10, 50
               

               
Conread position:
               
59-364
               

               
Cow position:
               
chr13:18999612-18999298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
59-364
               

               
Cow position:
               
chr13:25978117-25978423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
216, 88
               

               
Conread position:
               
60-275
               

               
Cow position:
               
chr13:3211624-3211411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
78, 64
               

               
Conread position:
               
60-298
               

               
Cow position:
               
chr13:17563809-17563577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
205, 68
               

               
Conread position:
               
62-356
               

               
Cow position:
               
chr13:42672351-42672653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
207, 44
               

               
Conread position:
               
63-343
               

               
Cow position:
               
chr13:15757190-15756907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
67, 44
               

               
Conread position:
               
63-346
               

               
Cow position:
               
chr13:36877121-36876853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
259, 54
               

               
Conread position:
               
63-359
               

               
Cow position:
               
chr13:14411956-14411665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
220, 53
               

               
Conread position:
               
63-364
               

               
Cow position:
               
chr13:20271158-20271460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
168, 16
               

               
Conread position:
               
64-281
               

               
Cow position:
               
chr13:37527895-37528097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
64-348
               

               
Cow position:
               
chr13:55162280-55161996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 63
               

               
Conread position:
               
64-357
               

               
Cow position:
               
chr13:6861251-6860953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
194, 43
               

               
Conread position:
               
64-371
               

               
Cow position:
               
chr13:45073182-45073486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
25, 87
               

               
Conread position:
               
65-251
               

               
Cow position:
               
chr13:29123373-29123189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
69, 59
               

               
Conread position:
               
65-332
               

               
Cow position:
               
chr13:16160485-16160231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
183, 27
               

               
Conread position:
               
65-361
               

               
Cow position:
               
chr13:8362682-8362971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
207, 9
               

               
Conread position:
               
65-361
               

               
Cow position:
               
chr13:10221019-10220727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
204, 41
               

               
Conread position:
               
68-320
               

               
Cow position:
               
chr13:13211951-13211705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
62, 29
               

               
Conread position:
               
69-281
               

               
Cow position:
               
chr13:23526181-23525966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
27, 86
               

               
Conread position:
               
69-348
               

               
Cow position:
               
chr13:20314555-20314839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 78
               

               
Conread position:
               
69-359
               

               
Cow position:
               
chr13:20115317-20115020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
101, 46
               

               
Conread position:
               
69-361
               

               
Cow position:
               
chr13:15239456-15239741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
247, 52
               

               
Conread position:
               
73-361
               

               
Cow position:
               
chr13:11103131-11103436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 174
               

               
Conread position:
               
74-255
               

               
Cow position:
               
chr13:18181714-18181894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
56, 42
               

               
Conread position:
               
74-342
               

               
Cow position:
               
chr13:35557046-35557318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 79
               

               
Conread position:
               
74-369
               

               
Cow position:
               
chr13:41115916-41115604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 59
               

               
Conread position:
               
75-315
               

               
Cow position:
               
chr13:52057618-52057379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 73
               

               
Conread position:
               
76-275
               

               
Cow position:
               
chr13:8355262-8355067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
77-347
               

               
Cow position:
               
chr13:25504589-25504323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
238, 44
               

               
Conread position:
               
77-347
               

               
Cow position:
               
chr13:45108356-45108614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
56, 47
               

               
Conread position:
               
78-371
               

               
Cow position:
               
chr13:19007987-19007707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
80-361
               

               
Cow position:
               
chr13:17089470-17089739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
239, 27
               

               
Conread position:
               
82-275
               

               
Cow position:
               
chr13:8478454-8478265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
83-346
               

               
Cow position:
               
chr13:21171522-21171784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
95, 37
               

               
Conread position:
               
83-366
               

               
Cow position:
               
chr13:17611500-17611782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 66
               

               
Conread position:
               
85-265
               

               
Cow position:
               
chr13:48465781-48465960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 69
               

               
Conread position:
               
88-367
               

               
Cow position:
               
chr13:20534939-20534667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 32
               

               
Conread position:
               
89-313
               

               
Cow position:
               
chr13:29663074-29662861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 59
               

               
Conread position:
               
90-343
               

               
Cow position:
               
chr13:55494477-55494728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 63
               

               
Conread position:
               
90-356
               

               
Cow position:
               
chr13:28440492-28440755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
31, 60
               

               
Conread position:
               
94-353
               

               
Cow position:
               
chr13:7149474-7149718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
226, 27
               

               
Conread position:
               
97-337
               

               
Cow position:
               
chr13:52536602-52536368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
86, 16
               

               
Conread position:
               
97-345
               

               
Cow position:
               
chr13:41157440-41157186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
143, 18
               

               
Conread position:
               
97-348
               

               
Cow position:
               
chr13:38035872-38035625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
219, 32
               

               
Conread position:
               
97-361
               

               
Cow position:
               
chr13:8350367-8350074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
17, 60
               

               
Conread position:
               
100-262
               

               
Cow position:
               
chr13:31529912-31529749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
147, 51
               

               
Conread position:
               
105-358
               

               
Cow position:
               
chr13:43525205-43525472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
138, 44
               

               
Conread position:
               
107-361
               

               
Cow position:
               
chr13:84601-84362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
237, 20
               

               
Conread position:
               
108-350
               

               
Cow position:
               
chr13:45439547-45439315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
211, 18
               

               
Conread position:
               
109-252
               

               
Cow position:
               
chr13:47634533-47634391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
84, 35
               

               
Conread position:
               
111-371
               

               
Cow position:
               
chr13:56535480-56535224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
21, 64
               

               
Conread position:
               
113-368
               

               
Cow position:
               
chr13:57985916-57986168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
205, 34
               

               
Conread position:
               
115-331
               

               
Cow position:
               
chr13:6926536-6926315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
142, 12
               

               
Conread position:
               
115-345
               

               
Cow position:
               
chr13:19598645-19598876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
204, 32
               

               
Conread position:
               
117-366
               

               
Cow position:
               
chr13:15083677-15083429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
159, 30
               

               
Conread position:
               
118-356
               

               
Cow position:
               
chr13:13775227-13775477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
122, 15
               

               
Conread position:
               
120-345
               

               
Cow position:
               
chr13:2776304-2776073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
121-361
               

               
Cow position:
               
chr13:21980962-21981196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
198, 25
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr13:37614181-37614419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
127-284
               

               
Cow position:
               
chr13:37621352-37621504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
127-320
               

               
Cow position:
               
chr13:14927268-14927079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
50, 22
               

               
Conread position:
               
127-349
               

               
Cow position:
               
chr13:1462289-1462507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
159, 20
               

               
Conread position:
               
127-349
               

               
Cow position:
               
chr13:14645059-14644838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
56, 25
               

               
Conread position:
               
127-361
               

               
Cow position:
               
chr13:3209313-3209549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
147, 12
               

               
Conread position:
               
130-359
               

               
Cow position:
               
chr13:57769983-57770208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
192, 62
               

               
Conread position:
               
131-406
               

               
Cow position:
               
chr13:15061477-15061759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 20
               

               
Conread position:
               
133-359
               

               
Cow position:
               
chr13:42849131-42849354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
115, 14
               

               
Conread position:
               
134-348
               

               
Cow position:
               
chr13:8450331-8450119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
182, 15
               

               
Conread position:
               
135-361
               

               
Cow position:
               
chr13:25941263-25941489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
131, 12
               

               
Conread position:
               
135-362
               

               
Cow position:
               
chr13:49356049-49356276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
187, 19
               

               
Conread position:
               
137-343
               

               
Cow position:
               
chr13:18092877-18093078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
182, 12
               

               
Conread position:
               
137-349
               

               
Cow position:
               
chr13:10210661-10210868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
137-352
               

               
Cow position:
               
chr13:37985746-37985966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
147, 10
               

               
Conread position:
               
137-371
               

               
Cow position:
               
chr13:15997032-15996798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
182, 10
               

               
Conread position:
               
139-276
               

               
Cow position:
               
chr13:21295071-21294936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
141-347
               

               
Cow position:
               
chr13:6980914-6980712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
178, 46
               

               
Conread position:
               
141-361
               

               
Cow position:
               
chr13:8699743-8699967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
128, 6
               

               
Conread position:
               
142-343
               

               
Cow position:
               
chr13:16908211-16908004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
140, 92
               

               
Conread position:
               
148-357
               

               
Cow position:
               
chr13:52027149-52027359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
166, 92
               

               
Conread position:
               
149-347
               

               
Cow position:
               
chr13:53850811-53850607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
149-348
               

               
Cow position:
               
chr13:13283334-13283124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
54, 24
               

               
Conread position:
               
149-356
               

               
Cow position:
               
chr13:49283793-49284000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
168, 98
               

               
Conread position:
               
150-348
               

               
Cow position:
               
chr13:33854698-33854895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
151-353
               

               
Cow position:
               
chr13:51249395-51249597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
193, 148
               

               
Conread position:
               
154-348
               

               
Cow position:
               
chr13:22601713-22601900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
165, 20
               

               
Conread position:
               
154-352
               

               
Cow position:
               
chr13:21277485-21277675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
165, 93
               

               
Conread position:
               
154-359
               

               
Cow position:
               
chr13:21188350-21188157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
168, 87
               

               
Conread position:
               
155-284
               

               
Cow position:
               
chr13:12237426-12237298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
155-320
               

               
Cow position:
               
chr13:10711434-10711598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
156-336
               

               
Cow position:
               
chr13:9391540-9391369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
156-346
               

               
Cow position:
               
chr13:31507464-31507654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
162, 92
               

               
Conread position:
               
156-347
               

               
Cow position:
               
chr13:52913853-52913663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
163, 91
               

               
Conread position:
               
156-361
               

               
Cow position:
               
chr13:3594300-3594106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
163, 8
               

               
Conread position:
               
156-361
               

               
Cow position:
               
chr13:24094337-24094544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
129, 37
               

               
Conread position:
               
156-361
               

               
Cow position:
               
chr13:53865616-53865407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
127, 103
               

               
Conread position:
               
156-367
               

               
Cow position:
               
chr13:37554894-37555105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
164, 31
               

               
Conread position:
               
157-309
               

               
Cow position:
               
chr13:16790188-16790041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
159-351
               

               
Cow position:
               
chr13:26423028-26422820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
159-359
               

               
Cow position:
               
chr13:9124901-9124702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
160, 53
               

               
Conread position:
               
159-361
               

               
Cow position:
               
chr13:37030319-37030122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
161, 85
               

               
Conread position:
               
159-364
               

               
Cow position:
               
chr13:3153727-3153517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
107, 87
               

               
Conread position:
               
159-369
               

               
Cow position:
               
chr13:30148586-30148789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
208, 82
               

               
Conread position:
               
160-359
               

               
Cow position:
               
chr13:55775335-55775138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
156, 6
               

               
Conread position:
               
161-361
               

               
Cow position:
               
chr13:6012747-6012946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 101
               

               
Conread position:
               
161-364
               

               
Cow position:
               
chr13:22345302-22345503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
146, 29
               

               
Conread position:
               
162-347
               

               
Cow position:
               
chr13:6113552-6113745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
162-361
               

               
Cow position:
               
chr13:16099147-16099356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
162-364
               

               
Cow position:
               
chr13:21246735-21246943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
107, 79
               

               
Conread position:
               
162-364
               

               
Cow position:
               
chr13:23975193-23975396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
57, 67
               

               
Conread position:
               
168-336
               

               
Cow position:
               
chr13:16525255-16525430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
89, 46
               

               
Conread position:
               
170-320
               

               
Cow position:
               
chr13:6865699-6865847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
170-320
               

               
Cow position:
               
chr13:52249082-52249228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
146, 74
               

               
Conread position:
               
170-352
               

               
Cow position:
               
chr13:5092428-5092614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
170-364
               

               
Cow position:
               
chr13:24107582-24107776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
148, 76
               

               
Conread position:
               
172-352
               

               
Cow position:
               
chr13:24796842-24796665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
172-361
               

               
Cow position:
               
chr13:53357797-53357600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
110, 68
               

               
Conread position:
               
173-347
               

               
Cow position:
               
chr13:13265524-13265351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
145, 75
               

               
Conread position:
               
178-361
               

               
Cow position:
               
chr13:28081680-28081489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
182-352
               

               
Cow position:
               
chr13:27198862-27198696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
182-361
               

               
Cow position:
               
chr13:23478855-23478674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
100, 13
               

               
Conread position:
               
182-361
               

               
Cow position:
               
chr13:25313195-25313380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
137, 125
               

               
Conread position:
               
183-347
               

               
Cow position:
               
chr13:20510973-20510805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
88, 138
               

               
Conread position:
               
183-361
               

               
Cow position:
               
chr13:23399719-23399543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
136, 75
               

               
Conread position:
               
183-366
               

               
Cow position:
               
chr13:53619957-53619769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
96, 58
               

               
Conread position:
               
184-345
               

               
Cow position:
               
chr13:26395413-26395248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
184-360
               

               
Cow position:
               
chr13:23823082-23823256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
135, 42
               

               
Conread position:
               
186-361
               

               
Cow position:
               
chr13:6951529-6951353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
131, 61
               

               
Conread position:
               
187-350
               

               
Cow position:
               
chr13:5930356-5930527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
187-368
               

               
Cow position:
               
chr13:43342517-43342333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
194-348
               

               
Cow position:
               
chr13:14782284-14782134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
195-348
               

               
Cow position:
               
chr13:56431884-56432035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
119, 52
               

               
Conread position:
               
195-390
               

               
Cow position:
               
chr13:47651475-47651670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
122, 72
               

               
Conread position:
               
202-358
               

               
Cow position:
               
chr13:17815172-17815018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
117, 40
               

               
Conread position:
               
205-361
               

               
Cow position:
               
chr13:25924291-25924456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
114, 66
               

               
Conread position:
               
209-365
               

               
Cow position:
               
chr13:58157130-58157285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
107, 51
               

               
Conread position:
               
214-362
               

               
Cow position:
               
chr13:41474794-41474647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
139, 44
               

               
Conread position:
               
228-356
               

               
Cow position:
               
chr13:30809465-30809597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
42, 30
               

               
Conread position:
               
230-361
               

               
Cow position:
               
chr13:47612955-47613086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
115, 27
               

               
Conread position:
               
234-367
               

               
Cow position:
               
chr13:12302482-12302618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
251-366
               

               
Cow position:
               
chr13:23480696-23480807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               
Show alignments to all cow chromosomes.