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Cow genome map

           
Conread name:
           
Ova1-OVRM10125H10
        

               
Conread position:
               
1-130
               

               
Cow position:
               
chr14:19633368-19633236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr14:33462347-33462161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
128, 33
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr14:21284816-21284618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
37, 63
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr14:31785158-31784940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 115
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr14:34082965-34083223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
98, 70
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr14:8784371-8784139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr14:35018566-35018815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
129, 90
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr14:39778939-39778684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 55
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr14:19372530-19372268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr14:32371557-32371820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr14:8750264-8749993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 148
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr14:37131844-37131580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr14:38337958-38338220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr14:15054800-15055081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 125
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr14:1646003-1646325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 113
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr14:27848387-27848037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
138, 73
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr14:16760585-16760254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 74
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr14:26433055-26433394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 58
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr14:48427262-48426925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 146
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr14:8848434-8848126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
320, 48
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr14:41211042-41210713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 85
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr14:3195037-3194716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr14:20110534-20110879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 91
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr14:20640438-20640787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 149
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr14:33791375-33791035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 107
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr14:15997578-15997912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 47
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr14:33751711-33751368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
295, 55
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr14:38921138-38920788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
166, 95
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr14:18345545-18345895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 82
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr14:16256955-16256604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 77
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr14:39918574-39918905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
321, 45
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr14:42154775-42155138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 154
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr14:24608155-24607793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 146
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr14:22989221-22988839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 18
               

               
Conread position:
               
2-348
               

               
Cow position:
               
chr14:19851740-19852094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
15, 128
               

               
Conread position:
               
2-350
               

               
Cow position:
               
chr14:49824438-49824773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr14:39434072-39434421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
28, 20
               

               
Conread position:
               
2-368
               

               
Cow position:
               
chr14:25986705-25986335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
30, 125
               

               
Conread position:
               
3-133
               

               
Cow position:
               
chr14:8495339-8495210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
94, 100
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr14:26190912-26191135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 32
               

               
Conread position:
               
3-264
               

               
Cow position:
               
chr14:23107516-23107251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 105
               

               
Conread position:
               
3-264
               

               
Cow position:
               
chr14:37678815-37679075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 32
               

               
Conread position:
               
3-273
               

               
Cow position:
               
chr14:39037423-39037147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 157
               

               
Conread position:
               
3-312
               

               
Cow position:
               
chr14:14417310-14417616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
283, 32
               

               
Conread position:
               
3-317
               

               
Cow position:
               
chr14:27305340-27305025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
29, 119
               

               
Conread position:
               
3-332
               

               
Cow position:
               
chr14:24387635-24387309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 112
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr14:30605732-30606064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
29, 111
               

               
Conread position:
               
3-343
               

               
Cow position:
               
chr14:8786364-8786690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
34, 112
               

               
Conread position:
               
3-347
               

               
Cow position:
               
chr14:21357738-21357400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
66, 43
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr14:36167125-36166782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
96, 48
               

               
Conread position:
               
3-352
               

               
Cow position:
               
chr14:19321319-19321672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
103, 119
               

               
Conread position:
               
3-358
               

               
Cow position:
               
chr14:8945894-8946252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
33, 125
               

               
Conread position:
               
3-361
               

               
Cow position:
               
chr14:6599764-6600125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
33, 148
               

               
Conread position:
               
3-361
               

               
Cow position:
               
chr14:20932802-20932452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
34, 119
               

               
Conread position:
               
3-361
               

               
Cow position:
               
chr14:41471781-41472144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
43, 109
               

               
Conread position:
               
3-366
               

               
Cow position:
               
chr14:45677410-45677056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 33
               

               
Conread position:
               
3-367
               

               
Cow position:
               
chr14:27355591-27355216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
29, 123
               

               
Conread position:
               
4-192
               

               
Cow position:
               
chr14:33828347-33828163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
27, 111
               

               
Conread position:
               
4-224
               

               
Cow position:
               
chr14:3162896-3162696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
115, 34
               

               
Conread position:
               
4-238
               

               
Cow position:
               
chr14:25385702-25385931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 43
               

               
Conread position:
               
4-238
               

               
Cow position:
               
chr14:41180512-41180759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 155
               

               
Conread position:
               
4-240
               

               
Cow position:
               
chr14:24796241-24796481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
83, 114
               

               
Conread position:
               
4-255
               

               
Cow position:
               
chr14:20384797-20385047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
44, 113
               

               
Conread position:
               
4-263
               

               
Cow position:
               
chr14:33309325-33309573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
32, 15
               

               
Conread position:
               
4-265
               

               
Cow position:
               
chr14:17841103-17841363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
124, 104
               

               
Conread position:
               
4-265
               

               
Cow position:
               
chr14:38355371-38355116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
31, 39
               

               
Conread position:
               
4-273
               

               
Cow position:
               
chr14:11615036-11615301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
146, 43
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr14:19129697-19129424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
27, 146
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr14:25779277-25779019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr14:33830483-33830212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
33, 105
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr14:45605277-45605000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
265, 110
               

               
Conread position:
               
4-320
               

               
Cow position:
               
chr14:47672699-47673005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
45, 127
               

               
Conread position:
               
4-321
               

               
Cow position:
               
chr14:41128079-41127778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
4-324
               

               
Cow position:
               
chr14:12520122-12520435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
38, 51
               

               
Conread position:
               
4-337
               

               
Cow position:
               
chr14:16033194-16032864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
102, 128
               

               
Conread position:
               
4-337
               

               
Cow position:
               
chr14:19593950-19594282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
60, 34
               

               
Conread position:
               
4-337
               

               
Cow position:
               
chr14:25002220-25001885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
242, 51
               

               
Conread position:
               
4-340
               

               
Cow position:
               
chr14:40165608-40165279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
274, 26
               

               
Conread position:
               
4-342
               

               
Cow position:
               
chr14:23080579-23080906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
110, 11
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr14:16549818-16550147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
4-344
               

               
Cow position:
               
chr14:24981643-24981299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 113
               

               
Conread position:
               
4-346
               

               
Cow position:
               
chr14:42596566-42596238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
288, 59
               

               
Conread position:
               
4-347
               

               
Cow position:
               
chr14:10609877-10609522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
54, 47
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr14:10721543-10721860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
45, 56
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr14:13042942-13042601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 104
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr14:21933155-21933501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
102, 81
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr14:42330537-42330188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
209, 69
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr14:43046333-43046018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr14:23682449-23682108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
79, 30
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr14:32452439-32452092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 145
               

               
Conread position:
               
4-350
               

               
Cow position:
               
chr14:4227017-4227384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
32, 250
               

               
Conread position:
               
4-350
               

               
Cow position:
               
chr14:13385556-13385205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
29, 68
               

               
Conread position:
               
4-350
               

               
Cow position:
               
chr14:36289614-36289951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
28, 74
               

               
Conread position:
               
4-351
               

               
Cow position:
               
chr14:19618566-19618904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
277, 38
               

               
Conread position:
               
4-352
               

               
Cow position:
               
chr14:9020213-9019878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
16, 24
               

               
Conread position:
               
4-353
               

               
Cow position:
               
chr14:41749572-41749919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 55
               

               
Conread position:
               
4-354
               

               
Cow position:
               
chr14:28115000-28115353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 104
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr14:6735674-6736035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
33, 60
               

               
Conread position:
               
4-358
               

               
Cow position:
               
chr14:26442156-26442513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 37
               

               
Conread position:
               
4-359
               

               
Cow position:
               
chr14:10078453-10078086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 32
               

               
Conread position:
               
4-359
               

               
Cow position:
               
chr14:20712501-20712852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
27, 113
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr14:8867376-8867731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
28, 116
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr14:48446977-48447334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 109
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr14:20016515-20016883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 125
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr14:26116247-26115887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
49, 111
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr14:38379207-38378833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
142, 81
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr14:39770047-39770389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 102
               

               
Conread position:
               
4-367
               

               
Cow position:
               
chr14:1715916-1715552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 19
               

               
Conread position:
               
4-367
               

               
Cow position:
               
chr14:48838781-48838410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 122
               

               
Conread position:
               
4-371
               

               
Cow position:
               
chr14:28304603-28304968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
33, 52
               

               
Conread position:
               
5-252
               

               
Cow position:
               
chr14:9308409-9308171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
5-255
               

               
Cow position:
               
chr14:1977895-1978135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
183, 30
               

               
Conread position:
               
5-268
               

               
Cow position:
               
chr14:34984048-34983793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
42, 55
               

               
Conread position:
               
5-268
               

               
Cow position:
               
chr14:40433105-40432850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
245, 101
               

               
Conread position:
               
5-273
               

               
Cow position:
               
chr14:19863245-19863513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
26, 113
               

               
Conread position:
               
5-273
               

               
Cow position:
               
chr14:29632701-29632959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
5-318
               

               
Cow position:
               
chr14:8101974-8101672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
5-335
               

               
Cow position:
               
chr14:23712872-23712550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
122, 82
               

               
Conread position:
               
5-343
               

               
Cow position:
               
chr14:33714498-33714827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 44
               

               
Conread position:
               
5-352
               

               
Cow position:
               
chr14:19189221-19188893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
220, 51
               

               
Conread position:
               
5-354
               

               
Cow position:
               
chr14:4877046-4877393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
26, 104
               

               
Conread position:
               
5-359
               

               
Cow position:
               
chr14:13846172-13845825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 85
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr14:20826660-20826320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 92
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr14:41809469-41809828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr14:46973622-46973270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 111
               

               
Conread position:
               
6-174
               

               
Cow position:
               
chr14:11819939-11820101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
6-232
               

               
Cow position:
               
chr14:41325256-41325486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
94, 18
               

               
Conread position:
               
6-254
               

               
Cow position:
               
chr14:48412696-48412944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
234, 141
               

               
Conread position:
               
6-264
               

               
Cow position:
               
chr14:21691089-21691347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
6-277
               

               
Cow position:
               
chr14:37884229-37884494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
242, 91
               

               
Conread position:
               
6-282
               

               
Cow position:
               
chr14:27591770-27592043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
14, 30
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr14:14182529-14182196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
116, 51
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr14:24417068-24416739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 83
               

               
Conread position:
               
6-348
               

               
Cow position:
               
chr14:15492780-15492433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 102
               

               
Conread position:
               
6-364
               

               
Cow position:
               
chr14:14949026-14949387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
30, 103
               

               
Conread position:
               
7-240
               

               
Cow position:
               
chr14:22966936-22966709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 108
               

               
Conread position:
               
7-287
               

               
Cow position:
               
chr14:46654362-46654635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
243, 56
               

               
Conread position:
               
7-303
               

               
Cow position:
               
chr14:4991181-4990890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
116, 39
               

               
Conread position:
               
7-361
               

               
Cow position:
               
chr14:2959694-2959354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
272, 47
               

               
Conread position:
               
7-362
               

               
Cow position:
               
chr14:36254524-36254863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
309, 110
               

               
Conread position:
               
8-222
               

               
Cow position:
               
chr14:33643600-33643806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
26, 39
               

               
Conread position:
               
8-276
               

               
Cow position:
               
chr14:10630943-10631202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 70
               

               
Conread position:
               
8-312
               

               
Cow position:
               
chr14:37447287-37447587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
29, 85
               

               
Conread position:
               
8-337
               

               
Cow position:
               
chr14:5630343-5630021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
311, 112
               

               
Conread position:
               
8-348
               

               
Cow position:
               
chr14:44084297-44084634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
106, 17
               

               
Conread position:
               
8-360
               

               
Cow position:
               
chr14:38747848-38747512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
8-361
               

               
Cow position:
               
chr14:13810120-13809782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
34, 108
               

               
Conread position:
               
8-361
               

               
Cow position:
               
chr14:18309117-18309473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
106, 38
               

               
Conread position:
               
9-236
               

               
Cow position:
               
chr14:18657422-18657650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
25, 141
               

               
Conread position:
               
9-256
               

               
Cow position:
               
chr14:39774870-39775113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
9, 38
               

               
Conread position:
               
9-348
               

               
Cow position:
               
chr14:48740690-48741024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
174, 105
               

               
Conread position:
               
9-361
               

               
Cow position:
               
chr14:4202912-4203263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
23, 112
               

               
Conread position:
               
12-324
               

               
Cow position:
               
chr14:27077163-27076835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
37, 48
               

               
Conread position:
               
14-362
               

               
Cow position:
               
chr14:14326931-14327294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 49
               

               
Conread position:
               
14-370
               

               
Cow position:
               
chr14:20010133-20010493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
92, 112
               

               
Conread position:
               
15-287
               

               
Cow position:
               
chr14:49021727-49021990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 96
               

               
Conread position:
               
19-275
               

               
Cow position:
               
chr14:34199678-34199924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
229, 95
               

               
Conread position:
               
19-359
               

               
Cow position:
               
chr14:23090210-23090549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
88, 54
               

               
Conread position:
               
20-362
               

               
Cow position:
               
chr14:7480186-7479834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
17, 89
               

               
Conread position:
               
22-361
               

               
Cow position:
               
chr14:48773072-48772747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
23-211
               

               
Cow position:
               
chr14:17831078-17830894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
54, 33
               

               
Conread position:
               
25-358
               

               
Cow position:
               
chr14:3948936-3949272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
7, 48
               

               
Conread position:
               
25-359
               

               
Cow position:
               
chr14:35503528-35503197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
31, 10
               

               
Conread position:
               
26-320
               

               
Cow position:
               
chr14:33300869-33300567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
45, 97
               

               
Conread position:
               
29-276
               

               
Cow position:
               
chr14:42437187-42436943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 86
               

               
Conread position:
               
30-367
               

               
Cow position:
               
chr14:22941562-22941917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 101
               

               
Conread position:
               
30-392
               

               
Cow position:
               
chr14:26654973-26655337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
31-276
               

               
Cow position:
               
chr14:19951728-19951484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
181, 83
               

               
Conread position:
               
31-348
               

               
Cow position:
               
chr14:37422628-37422931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 117
               

               
Conread position:
               
32-268
               

               
Cow position:
               
chr14:14187490-14187257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
35-361
               

               
Cow position:
               
chr14:30760372-30760045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
123, 39
               

               
Conread position:
               
40-346
               

               
Cow position:
               
chr14:2038665-2038942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
26, 19
               

               
Conread position:
               
41-252
               

               
Cow position:
               
chr14:29698209-29698420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
152, 45
               

               
Conread position:
               
41-291
               

               
Cow position:
               
chr14:19360043-19359791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
93, 41
               

               
Conread position:
               
48-361
               

               
Cow position:
               
chr14:35532894-35533212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
106, 67
               

               
Conread position:
               
55-352
               

               
Cow position:
               
chr14:16524610-16524307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 17
               

               
Conread position:
               
55-371
               

               
Cow position:
               
chr14:25225867-25225553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 94
               

               
Conread position:
               
56-348
               

               
Cow position:
               
chr14:27394332-27394622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
98, 9
               

               
Conread position:
               
58-366
               

               
Cow position:
               
chr14:47170220-47170525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 71
               

               
Conread position:
               
59-238
               

               
Cow position:
               
chr14:5633807-5633990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
117, 92
               

               
Conread position:
               
59-265
               

               
Cow position:
               
chr14:16834456-16834251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
47, 87
               

               
Conread position:
               
59-337
               

               
Cow position:
               
chr14:42419143-42419426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
210, 59
               

               
Conread position:
               
59-343
               

               
Cow position:
               
chr14:25903658-25903379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
20, 56
               

               
Conread position:
               
59-348
               

               
Cow position:
               
chr14:5222158-5222443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 62
               

               
Conread position:
               
59-348
               

               
Cow position:
               
chr14:7036224-7036518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
94, 100
               

               
Conread position:
               
59-348
               

               
Cow position:
               
chr14:12634756-12635035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
261, 66
               

               
Conread position:
               
59-348
               

               
Cow position:
               
chr14:12954253-12954533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
59-348
               

               
Cow position:
               
chr14:23424388-23424107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
260, 61
               

               
Conread position:
               
59-348
               

               
Cow position:
               
chr14:23443149-23442868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
260, 61
               

               
Conread position:
               
59-350
               

               
Cow position:
               
chr14:27823564-27823271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 18
               

               
Conread position:
               
59-353
               

               
Cow position:
               
chr14:26222875-26222573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
62, 90
               

               
Conread position:
               
59-359
               

               
Cow position:
               
chr14:47252094-47252402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
109, 54
               

               
Conread position:
               
59-361
               

               
Cow position:
               
chr14:11056609-11056903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
112, 56
               

               
Conread position:
               
59-362
               

               
Cow position:
               
chr14:11470018-11470324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
211, 98
               

               
Conread position:
               
60-357
               

               
Cow position:
               
chr14:16352475-16352191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
261, 63
               

               
Conread position:
               
63-354
               

               
Cow position:
               
chr14:40474688-40474397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
90, 49
               

               
Conread position:
               
63-356
               

               
Cow position:
               
chr14:13582624-13582920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
153, 51
               

               
Conread position:
               
64-347
               

               
Cow position:
               
chr14:10937818-10937513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 94
               

               
Conread position:
               
65-348
               

               
Cow position:
               
chr14:4282383-4282668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
194, 49
               

               
Conread position:
               
65-359
               

               
Cow position:
               
chr14:48745268-48745537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
65-360
               

               
Cow position:
               
chr14:12244257-12244552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
48, 63
               

               
Conread position:
               
65-361
               

               
Cow position:
               
chr14:12072825-12073126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
31, 57
               

               
Conread position:
               
68-343
               

               
Cow position:
               
chr14:1796312-1796044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
208, 47
               

               
Conread position:
               
68-358
               

               
Cow position:
               
chr14:36442895-36443183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
48, 59
               

               
Conread position:
               
69-336
               

               
Cow position:
               
chr14:10693138-10693403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
217, 51
               

               
Conread position:
               
69-343
               

               
Cow position:
               
chr14:24945370-24945647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 12
               

               
Conread position:
               
71-270
               

               
Cow position:
               
chr14:19959616-19959812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
177, 22
               

               
Conread position:
               
73-361
               

               
Cow position:
               
chr14:41486143-41486441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
181, 74
               

               
Conread position:
               
73-366
               

               
Cow position:
               
chr14:29965134-29964841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
197, 30
               

               
Conread position:
               
75-357
               

               
Cow position:
               
chr14:49807284-49807006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
221, 79
               

               
Conread position:
               
76-348
               

               
Cow position:
               
chr14:19827357-19827630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
33, 77
               

               
Conread position:
               
77-284
               

               
Cow position:
               
chr14:5557006-5557212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
194, 72
               

               
Conread position:
               
79-239
               

               
Cow position:
               
chr14:42480108-42480263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
80-232
               

               
Cow position:
               
chr14:19939236-19939086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
81-348
               

               
Cow position:
               
chr14:21224749-21224485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 66
               

               
Conread position:
               
82-229
               

               
Cow position:
               
chr14:2345177-2345031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
82-368
               

               
Cow position:
               
chr14:7636387-7636680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
39, 45
               

               
Conread position:
               
83-206
               

               
Cow position:
               
chr14:15260918-15260796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
87-335
               

               
Cow position:
               
chr14:49916777-49916533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
39, 61
               

               
Conread position:
               
87-361
               

               
Cow position:
               
chr14:23103893-23104167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 63
               

               
Conread position:
               
87-364
               

               
Cow position:
               
chr14:11643153-11643418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
87-366
               

               
Cow position:
               
chr14:41837769-41838031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
234, 39
               

               
Conread position:
               
97-277
               

               
Cow position:
               
chr14:25334152-25333975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
102-348
               

               
Cow position:
               
chr14:10852120-10851869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
115, 45
               

               
Conread position:
               
105-356
               

               
Cow position:
               
chr14:12884347-12884098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
215, 8
               

               
Conread position:
               
105-361
               

               
Cow position:
               
chr14:16457603-16457351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
208, 11
               

               
Conread position:
               
108-349
               

               
Cow position:
               
chr14:7198581-7198336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
175, 16
               

               
Conread position:
               
109-371
               

               
Cow position:
               
chr14:13731019-13731278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
111, 11
               

               
Conread position:
               
112-273
               

               
Cow position:
               
chr14:34096487-34096644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
100, 37
               

               
Conread position:
               
112-331
               

               
Cow position:
               
chr14:34140114-34140333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
140, 21
               

               
Conread position:
               
112-361
               

               
Cow position:
               
chr14:18941209-18941458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
157, 12
               

               
Conread position:
               
112-366
               

               
Cow position:
               
chr14:4848426-4848175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 12
               

               
Conread position:
               
114-347
               

               
Cow position:
               
chr14:12033163-12033402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
120, 35
               

               
Conread position:
               
116-284
               

               
Cow position:
               
chr14:2833328-2833495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
16, 34
               

               
Conread position:
               
116-322
               

               
Cow position:
               
chr14:12924378-12924177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
55, 33
               

               
Conread position:
               
116-362
               

               
Cow position:
               
chr14:29734288-29734533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 33
               

               
Conread position:
               
117-343
               

               
Cow position:
               
chr14:43868384-43868153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
139, 32
               

               
Conread position:
               
121-237
               

               
Cow position:
               
chr14:20349658-20349770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
125-342
               

               
Cow position:
               
chr14:9308132-9307914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
132, 24
               

               
Conread position:
               
126-351
               

               
Cow position:
               
chr14:10706941-10706718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
193, 23
               

               
Conread position:
               
126-361
               

               
Cow position:
               
chr14:18302027-18301784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
111, 25
               

               
Conread position:
               
127-308
               

               
Cow position:
               
chr14:2541037-2541215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
51, 8
               

               
Conread position:
               
128-343
               

               
Cow position:
               
chr14:19487359-19487160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
128-360
               

               
Cow position:
               
chr14:40191649-40191430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
128-361
               

               
Cow position:
               
chr14:11577132-11576899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
149, 19
               

               
Conread position:
               
130-374
               

               
Cow position:
               
chr14:12546505-12546739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
161, 19
               

               
Conread position:
               
132-276
               

               
Cow position:
               
chr14:45577032-45577174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
132-352
               

               
Cow position:
               
chr14:31177227-31177441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
68, 12
               

               
Conread position:
               
133-346
               

               
Cow position:
               
chr14:27733661-27733452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
187, 14
               

               
Conread position:
               
133-360
               

               
Cow position:
               
chr14:1431773-1431986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
134-274
               

               
Cow position:
               
chr14:2981613-2981750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
135-347
               

               
Cow position:
               
chr14:11729053-11729264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
184, 12
               

               
Conread position:
               
135-359
               

               
Cow position:
               
chr14:46977550-46977771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
135-361
               

               
Cow position:
               
chr14:15469925-15470157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
113, 12
               

               
Conread position:
               
136-348
               

               
Cow position:
               
chr14:36775706-36775505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
183, 56
               

               
Conread position:
               
137-350
               

               
Cow position:
               
chr14:23078737-23078952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
182, 10
               

               
Conread position:
               
137-361
               

               
Cow position:
               
chr14:15428533-15428307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
156, 9
               

               
Conread position:
               
138-264
               

               
Cow position:
               
chr14:40287646-40287522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
142-355
               

               
Cow position:
               
chr14:7127908-7127695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
106, 5
               

               
Conread position:
               
149-347
               

               
Cow position:
               
chr14:21556982-21557182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
137, 75
               

               
Conread position:
               
149-364
               

               
Cow position:
               
chr14:8949695-8949480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
32, 110
               

               
Conread position:
               
151-348
               

               
Cow position:
               
chr14:9510584-9510387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
114, 9
               

               
Conread position:
               
154-346
               

               
Cow position:
               
chr14:8707588-8707400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
160, 25
               

               
Conread position:
               
154-361
               

               
Cow position:
               
chr14:41156685-41156890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
156-372
               

               
Cow position:
               
chr14:35651748-35651961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
165, 67
               

               
Conread position:
               
159-361
               

               
Cow position:
               
chr14:47224332-47224541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
110, 27
               

               
Conread position:
               
160-361
               

               
Cow position:
               
chr14:36559193-36559397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
31, 13
               

               
Conread position:
               
161-360
               

               
Cow position:
               
chr14:27653196-27652989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
108, 81
               

               
Conread position:
               
162-320
               

               
Cow position:
               
chr14:21530045-21530203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
107, 28
               

               
Conread position:
               
164-367
               

               
Cow position:
               
chr14:19832365-19832569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
117, 12
               

               
Conread position:
               
166-336
               

               
Cow position:
               
chr14:2759109-2759279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
151, 82
               

               
Conread position:
               
170-358
               

               
Cow position:
               
chr14:23465026-23465220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
99, 89
               

               
Conread position:
               
170-361
               

               
Cow position:
               
chr14:11079475-11079284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
149, 76
               

               
Conread position:
               
170-386
               

               
Cow position:
               
chr14:5668095-5668317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
110, 71
               

               
Conread position:
               
172-332
               

               
Cow position:
               
chr14:44751006-44751168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 24
               

               
Conread position:
               
173-354
               

               
Cow position:
               
chr14:20914957-20915145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
174-335
               

               
Cow position:
               
chr14:11280094-11280258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
176-348
               

               
Cow position:
               
chr14:27847367-27847198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
146, 24
               

               
Conread position:
               
178-348
               

               
Cow position:
               
chr14:32784100-32784276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
91, 69
               

               
Conread position:
               
179-346
               

               
Cow position:
               
chr14:33618317-33618152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
143, 69
               

               
Conread position:
               
183-347
               

               
Cow position:
               
chr14:15228550-15228388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
139, 64
               

               
Conread position:
               
187-347
               

               
Cow position:
               
chr14:9030287-9030129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
129, 35
               

               
Conread position:
               
187-347
               

               
Cow position:
               
chr14:36151331-36151167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
187-367
               

               
Cow position:
               
chr14:24746473-24746278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
188-365
               

               
Cow position:
               
chr14:19633233-19633068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
159, 70
               

               
Conread position:
               
194-361
               

               
Cow position:
               
chr14:11604881-11604714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
132, 160
               

               
Conread position:
               
226-367
               

               
Cow position:
               
chr14:50683066-50683208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
228-361
               

               
Cow position:
               
chr14:7781863-7782002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               
Show alignments to all cow chromosomes.