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Cow genome map

           
Conread name:
           
Ova1-OVRM10125H10
        

               
Conread position:
               
1-104
               

               
Cow position:
               
chr16:23761978-23762082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
1-162
               

               
Cow position:
               
chr16:16177671-16177830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
116, 32
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr16:39417264-39417105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr16:35168582-35168753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
111, 74
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr16:24148011-24148190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
110, 121
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr16:53037770-53037595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr16:39237800-39237999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
105, 57
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr16:50532917-50533109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr16:38191325-38191537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
35, 107
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr16:8279932-8279722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
128, 7
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr16:13752271-13752058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr16:35937193-35937412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr16:50521331-50521562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr16:39514222-39513988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 86
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr16:52889555-52889323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr16:10352724-10352971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
112, 156
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr16:31122392-31122161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
112, 55
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr16:52789912-52790143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
113, 11
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr16:5636442-5636689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
49, 79
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr16:41697234-41696987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
32, 18
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr16:4626538-4626274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 83
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr16:48340842-48340574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 33
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr16:5256853-5257121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 55
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr16:17945375-17945648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 40
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr16:19003663-19003407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr16:48370094-48369823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
242, 48
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr16:3633966-3634242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
105, 69
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr16:11806529-11806813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 85
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr16:25386834-25387130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 55
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr16:54679522-54679821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr16:8366967-8366658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
128, 55
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr16:33226685-33226372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 119
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr16:7504941-7505247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr16:47964962-47964651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 112
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr16:48006634-48006324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 48
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr16:47643270-47643618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
239, 18
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr16:32781219-32781557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
242, 123
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr16:31348914-31348574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 149
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr16:45676999-45676686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 110
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr16:424958-424619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 16
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr16:38708977-38708643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 109
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr16:3047488-3047144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 93
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr16:4275888-4275544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 93
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr16:33704660-33705001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 147
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr16:15824591-15824241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 96
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr16:32970225-32969882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 112
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr16:50282572-50282235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
182, 113
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr16:52169919-52170253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
318, 16
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr16:28191923-28192253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
73, 33
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr16:42399046-42398688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 116
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr16:45677840-45678179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 40
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr16:48956648-48957000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 48
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr16:9985533-9985200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 48
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr16:29557774-29557421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
237, 105
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr16:51598752-51598409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 108
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr16:47820427-47820779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 33
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr16:49126332-49125983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 36
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr16:3303885-3304244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
268, 55
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr16:51578563-51578237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
317, 55
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr16:51710275-51709938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
54, 64
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr16:13611598-13611227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
102, 17
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr16:23033712-23034041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
270, 35
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr16:45813848-45813487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 14
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr16:50289002-50289369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 148
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr16:50417830-50417498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
316, 53
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr16:10148130-10148484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
30, 150
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr16:26649776-26649421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr16:56231680-56232027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 96
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr16:23681223-23681577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 50
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr16:52636527-52636181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
37, 59
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr16:33198581-33198215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 82
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr16:12320075-12320440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 85
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr16:9973645-9973258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 124
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr16:42777820-42778172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
129, 70
               

               
Conread position:
               
2-348
               

               
Cow position:
               
chr16:23366098-23366426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
2-348
               

               
Cow position:
               
chr16:23472601-23472943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
33, 133
               

               
Conread position:
               
3-168
               

               
Cow position:
               
chr16:16424748-16424592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
3-180
               

               
Cow position:
               
chr16:18679052-18679228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr16:4699125-4698873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr16:14974677-14974425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
46, 32
               

               
Conread position:
               
3-347
               

               
Cow position:
               
chr16:1549018-1548681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
314, 32
               

               
Conread position:
               
3-347
               

               
Cow position:
               
chr16:48398397-48398058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 55
               

               
Conread position:
               
3-350
               

               
Cow position:
               
chr16:23483147-23483485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 11
               

               
Conread position:
               
3-352
               

               
Cow position:
               
chr16:42078985-42078643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 105
               

               
Conread position:
               
3-361
               

               
Cow position:
               
chr16:24128560-24128921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
34, 109
               

               
Conread position:
               
3-361
               

               
Cow position:
               
chr16:55784903-55784532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
29, 125
               

               
Conread position:
               
3-371
               

               
Cow position:
               
chr16:238121-238489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 120
               

               
Conread position:
               
4-127
               

               
Cow position:
               
chr16:49141708-49141583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
4-154
               

               
Cow position:
               
chr16:39385264-39385414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
107, 144
               

               
Conread position:
               
4-203
               

               
Cow position:
               
chr16:21905022-21905215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
4-214
               

               
Cow position:
               
chr16:10651034-10650824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
122, 109
               

               
Conread position:
               
4-218
               

               
Cow position:
               
chr16:13233092-13232881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
188, 116
               

               
Conread position:
               
4-219
               

               
Cow position:
               
chr16:22860904-22860700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
4-231
               

               
Cow position:
               
chr16:4981526-4981296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
130, 104
               

               
Conread position:
               
4-231
               

               
Cow position:
               
chr16:48191145-48190931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
4-238
               

               
Cow position:
               
chr16:23738035-23738269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
33, 89
               

               
Conread position:
               
4-238
               

               
Cow position:
               
chr16:32327508-32327746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
113, 31
               

               
Conread position:
               
4-238
               

               
Cow position:
               
chr16:53627571-53627340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
4-238
               

               
Cow position:
               
chr16:53891925-53891699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
80, 113
               

               
Conread position:
               
4-256
               

               
Cow position:
               
chr16:12060273-12060522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
4-261
               

               
Cow position:
               
chr16:11105409-11105665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr16:11790873-11791123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr16:37669880-37669623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
110, 119
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr16:41689552-41689807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
47, 112
               

               
Conread position:
               
4-265
               

               
Cow position:
               
chr16:48493035-48493295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
4-268
               

               
Cow position:
               
chr16:39394433-39394687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
4-269
               

               
Cow position:
               
chr16:4902445-4902709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
242, 37
               

               
Conread position:
               
4-273
               

               
Cow position:
               
chr16:18402541-18402809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
106, 114
               

               
Conread position:
               
4-275
               

               
Cow position:
               
chr16:17288797-17289072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 118
               

               
Conread position:
               
4-275
               

               
Cow position:
               
chr16:40562087-40562355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:15960435-15960165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
44, 56
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:20025303-20025565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr16:20634022-20633750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
126, 145
               

               
Conread position:
               
4-277
               

               
Cow position:
               
chr16:14758588-14758865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 148
               

               
Conread position:
               
4-277
               

               
Cow position:
               
chr16:30715352-30715629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
93, 78
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr16:43801063-43800780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 146
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr16:49169529-49169240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
47, 127
               

               
Conread position:
               
4-289
               

               
Cow position:
               
chr16:13195485-13195206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
126, 110
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr16:8812226-8811954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
287, 120
               

               
Conread position:
               
4-298
               

               
Cow position:
               
chr16:39616599-39616869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
60, 35
               

               
Conread position:
               
4-311
               

               
Cow position:
               
chr16:8933570-8933271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
35, 107
               

               
Conread position:
               
4-312
               

               
Cow position:
               
chr16:5896275-5896582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
102, 143
               

               
Conread position:
               
4-315
               

               
Cow position:
               
chr16:37452762-37452451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
57, 128
               

               
Conread position:
               
4-316
               

               
Cow position:
               
chr16:45139528-45139830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 108
               

               
Conread position:
               
4-317
               

               
Cow position:
               
chr16:11615376-11615076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 82
               

               
Conread position:
               
4-320
               

               
Cow position:
               
chr16:3614603-3614907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
234, 31
               

               
Conread position:
               
4-323
               

               
Cow position:
               
chr16:42242260-42241950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
38, 111
               

               
Conread position:
               
4-326
               

               
Cow position:
               
chr16:13969524-13969185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
34, 131
               

               
Conread position:
               
4-335
               

               
Cow position:
               
chr16:33645871-33646203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 82
               

               
Conread position:
               
4-337
               

               
Cow position:
               
chr16:14685533-14685201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 124
               

               
Conread position:
               
4-337
               

               
Cow position:
               
chr16:16402467-16402129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 128
               

               
Conread position:
               
4-337
               

               
Cow position:
               
chr16:20476392-20476723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
32, 11
               

               
Conread position:
               
4-337
               

               
Cow position:
               
chr16:29037760-29038107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
28, 189
               

               
Conread position:
               
4-340
               

               
Cow position:
               
chr16:14125010-14125314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
312, 30
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr16:8240009-8239668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 78
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr16:11008201-11008524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
124, 31
               

               
Conread position:
               
4-344
               

               
Cow position:
               
chr16:6263003-6262652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
28, 111
               

               
Conread position:
               
4-346
               

               
Cow position:
               
chr16:26676833-26676492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
34, 127
               

               
Conread position:
               
4-347
               

               
Cow position:
               
chr16:23563992-23564338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
38, 105
               

               
Conread position:
               
4-347
               

               
Cow position:
               
chr16:43308709-43308365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
29, 149
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr16:820104-820452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 144
               

               
Conread position:
               
4-350
               

               
Cow position:
               
chr16:16265243-16264915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
4-352
               

               
Cow position:
               
chr16:7136498-7136141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
34, 114
               

               
Conread position:
               
4-352
               

               
Cow position:
               
chr16:29712276-29712621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
27, 113
               

               
Conread position:
               
4-352
               

               
Cow position:
               
chr16:40333465-40333129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 33
               

               
Conread position:
               
4-353
               

               
Cow position:
               
chr16:52275274-52274929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 99
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr16:7152317-7151963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
7, 123
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr16:25839475-25839822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 145
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr16:28396244-28395879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
33, 161
               

               
Conread position:
               
4-358
               

               
Cow position:
               
chr16:7442246-7441890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
33, 146
               

               
Conread position:
               
4-358
               

               
Cow position:
               
chr16:27723069-27723420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
102, 264
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr16:14106502-14106856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 97
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr16:17745691-17746055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
131, 31
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr16:48145551-48145195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
43, 150
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr16:53509130-53508782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
33, 116
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr16:2223547-2223179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
27, 148
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr16:7418240-7418587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 114
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr16:10039983-10039633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
30, 52
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr16:13689521-13689874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 143
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr16:14754466-14754115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
194, 111
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr16:35758068-35758414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
112, 68
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr16:37116927-37117292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
28, 144
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr16:42340052-42340392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
33, 65
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr16:42734157-42733806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
110, 25
               

               
Conread position:
               
4-364
               

               
Cow position:
               
chr16:38905373-38905009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
31, 105
               

               
Conread position:
               
4-364
               

               
Cow position:
               
chr16:52835027-52834683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 52
               

               
Conread position:
               
4-365
               

               
Cow position:
               
chr16:18354096-18353736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
43, 62
               

               
Conread position:
               
4-368
               

               
Cow position:
               
chr16:8494141-8493769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
108, 130
               

               
Conread position:
               
4-371
               

               
Cow position:
               
chr16:14242228-14242593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 51
               

               
Conread position:
               
4-374
               

               
Cow position:
               
chr16:25170247-25170617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 15
               

               
Conread position:
               
4-377
               

               
Cow position:
               
chr16:16597422-16597787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 25
               

               
Conread position:
               
5-191
               

               
Cow position:
               
chr16:4144921-4145104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
37, 143
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chr16:45047772-45047573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
5-263
               

               
Cow position:
               
chr16:5836440-5836699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
163, 36
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr16:42345746-42345500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
5-273
               

               
Cow position:
               
chr16:20069685-20069954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 22
               

               
Conread position:
               
5-274
               

               
Cow position:
               
chr16:25380639-25380372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
26, 125
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr16:10772990-10773246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr16:5363753-5364026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 145
               

               
Conread position:
               
5-284
               

               
Cow position:
               
chr16:19408659-19408393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
264, 112
               

               
Conread position:
               
5-298
               

               
Cow position:
               
chr16:50688382-50688670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
102, 8
               

               
Conread position:
               
5-320
               

               
Cow position:
               
chr16:56522617-56522303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
31, 124
               

               
Conread position:
               
5-335
               

               
Cow position:
               
chr16:8840750-8841085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 82
               

               
Conread position:
               
5-340
               

               
Cow position:
               
chr16:4910674-4910329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
31, 115
               

               
Conread position:
               
5-343
               

               
Cow position:
               
chr16:51246805-51247141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 65
               

               
Conread position:
               
5-345
               

               
Cow position:
               
chr16:51500791-51501126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 89
               

               
Conread position:
               
5-347
               

               
Cow position:
               
chr16:8068961-8068616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
121, 31
               

               
Conread position:
               
5-347
               

               
Cow position:
               
chr16:56565453-56565788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
26, 57
               

               
Conread position:
               
5-348
               

               
Cow position:
               
chr16:935585-935256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
229, 49
               

               
Conread position:
               
5-348
               

               
Cow position:
               
chr16:18757983-18757634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
37, 55
               

               
Conread position:
               
5-349
               

               
Cow position:
               
chr16:46433470-46433122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 24
               

               
Conread position:
               
5-351
               

               
Cow position:
               
chr16:41752715-41752376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
115, 81
               

               
Conread position:
               
5-352
               

               
Cow position:
               
chr16:4059213-4059565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
263, 6
               

               
Conread position:
               
5-352
               

               
Cow position:
               
chr16:48385543-48385212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
116, 109
               

               
Conread position:
               
5-356
               

               
Cow position:
               
chr16:39474280-39473950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 42
               

               
Conread position:
               
5-359
               

               
Cow position:
               
chr16:7665492-7665853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
32, 113
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr16:957039-956671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
148, 240
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr16:13307006-13306659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 78
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr16:13989839-13990178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 68
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr16:19643746-19644099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 69
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr16:55683153-55683512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
26, 113
               

               
Conread position:
               
5-363
               

               
Cow position:
               
chr16:12273925-12274291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 110
               

               
Conread position:
               
5-367
               

               
Cow position:
               
chr16:8522538-8522169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
26, 177
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr16:38243805-38243433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
32, 120
               

               
Conread position:
               
6-220
               

               
Cow position:
               
chr16:33507925-33508142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
121, 75
               

               
Conread position:
               
6-279
               

               
Cow position:
               
chr16:7549826-7550094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
6-311
               

               
Cow position:
               
chr16:45609849-45610149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
26, 21
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr16:33596077-33595750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
31, 109
               

               
Conread position:
               
6-356
               

               
Cow position:
               
chr16:8323124-8322788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
100, 121
               

               
Conread position:
               
6-360
               

               
Cow position:
               
chr16:22380497-22380152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
6-364
               

               
Cow position:
               
chr16:10592293-10592650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 102
               

               
Conread position:
               
7-348
               

               
Cow position:
               
chr16:24855401-24855735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 140
               

               
Conread position:
               
7-361
               

               
Cow position:
               
chr16:48095902-48095556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 48
               

               
Conread position:
               
7-361
               

               
Cow position:
               
chr16:54664940-54664592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
24, 12
               

               
Conread position:
               
8-253
               

               
Cow position:
               
chr16:16096596-16096839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
34, 169
               

               
Conread position:
               
8-273
               

               
Cow position:
               
chr16:48494693-48494432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
8-276
               

               
Cow position:
               
chr16:7498921-7499175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 52
               

               
Conread position:
               
8-276
               

               
Cow position:
               
chr16:12633746-12634010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
25, 110
               

               
Conread position:
               
8-283
               

               
Cow position:
               
chr16:29608379-29608641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 61
               

               
Conread position:
               
8-336
               

               
Cow position:
               
chr16:18205821-18206144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
40, 50
               

               
Conread position:
               
8-355
               

               
Cow position:
               
chr16:42092523-42092171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 74
               

               
Conread position:
               
8-359
               

               
Cow position:
               
chr16:49125668-49125310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
110, 120
               

               
Conread position:
               
8-364
               

               
Cow position:
               
chr16:54579030-54579383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 75
               

               
Conread position:
               
9-347
               

               
Cow position:
               
chr16:31079236-31078903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 90
               

               
Conread position:
               
9-352
               

               
Cow position:
               
chr16:9933020-9933366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
22, 49
               

               
Conread position:
               
9-361
               

               
Cow position:
               
chr16:54710172-54709839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
308, 99
               

               
Conread position:
               
12-220
               

               
Cow position:
               
chr16:16548474-16548683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
101, 137
               

               
Conread position:
               
12-264
               

               
Cow position:
               
chr16:571049-570806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
12-302
               

               
Cow position:
               
chr16:17282529-17282811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
119, 68
               

               
Conread position:
               
12-320
               

               
Cow position:
               
chr16:41578090-41578396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 121
               

               
Conread position:
               
12-343
               

               
Cow position:
               
chr16:50873300-50872993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
284, 104
               

               
Conread position:
               
12-348
               

               
Cow position:
               
chr16:29655193-29655515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 77
               

               
Conread position:
               
12-361
               

               
Cow position:
               
chr16:9904957-9905307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 24
               

               
Conread position:
               
13-357
               

               
Cow position:
               
chr16:42444021-42444370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
76, 105
               

               
Conread position:
               
14-255
               

               
Cow position:
               
chr16:27160989-27160759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
108, 21
               

               
Conread position:
               
14-276
               

               
Cow position:
               
chr16:35188120-35188374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
19, 93
               

               
Conread position:
               
14-332
               

               
Cow position:
               
chr16:10504699-10504999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
14-350
               

               
Cow position:
               
chr16:19047572-19047229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 117
               

               
Conread position:
               
14-354
               

               
Cow position:
               
chr16:40446118-40446475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
23, 142
               

               
Conread position:
               
14-356
               

               
Cow position:
               
chr16:47518704-47519041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
78, 139
               

               
Conread position:
               
14-361
               

               
Cow position:
               
chr16:44584571-44584229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 135
               

               
Conread position:
               
14-370
               

               
Cow position:
               
chr16:21450710-21451077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
22, 114
               

               
Conread position:
               
15-359
               

               
Cow position:
               
chr16:36121113-36120783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
20, 100
               

               
Conread position:
               
16-224
               

               
Cow position:
               
chr16:45645817-45645614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
154, 40
               

               
Conread position:
               
16-268
               

               
Cow position:
               
chr16:36203749-36203499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
159, 39
               

               
Conread position:
               
16-335
               

               
Cow position:
               
chr16:48146789-48146466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
180, 69
               

               
Conread position:
               
16-347
               

               
Cow position:
               
chr16:31117746-31117419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 111
               

               
Conread position:
               
19-276
               

               
Cow position:
               
chr16:39172284-39172023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
91, 60
               

               
Conread position:
               
19-348
               

               
Cow position:
               
chr16:8959188-8958857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
13, 94
               

               
Conread position:
               
19-349
               

               
Cow position:
               
chr16:11815734-11815388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
12, 120
               

               
Conread position:
               
19-349
               

               
Cow position:
               
chr16:23955955-23955629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
250, 23
               

               
Conread position:
               
19-350
               

               
Cow position:
               
chr16:45554314-45554637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 89
               

               
Conread position:
               
19-352
               

               
Cow position:
               
chr16:4857224-4856894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 37
               

               
Conread position:
               
19-352
               

               
Cow position:
               
chr16:7010940-7011277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 85
               

               
Conread position:
               
19-361
               

               
Cow position:
               
chr16:8737936-8738284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 102
               

               
Conread position:
               
20-350
               

               
Cow position:
               
chr16:56850215-56850551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
17, 105
               

               
Conread position:
               
22-361
               

               
Cow position:
               
chr16:11082883-11083208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
295, 33
               

               
Conread position:
               
23-239
               

               
Cow position:
               
chr16:39402123-39401927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
25-348
               

               
Cow position:
               
chr16:7075791-7076121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
223, 120
               

               
Conread position:
               
26-276
               

               
Cow position:
               
chr16:21762093-21761845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
100, 110
               

               
Conread position:
               
26-361
               

               
Cow position:
               
chr16:5907229-5907571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
96, 9
               

               
Conread position:
               
27-347
               

               
Cow position:
               
chr16:55233574-55233878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
293, 29
               

               
Conread position:
               
28-331
               

               
Cow position:
               
chr16:23730046-23729734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 122
               

               
Conread position:
               
29-349
               

               
Cow position:
               
chr16:34754079-34753753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 87
               

               
Conread position:
               
30-349
               

               
Cow position:
               
chr16:56796783-56796452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
235, 84
               

               
Conread position:
               
30-356
               

               
Cow position:
               
chr16:12108504-12108162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
81, 44
               

               
Conread position:
               
30-359
               

               
Cow position:
               
chr16:4852233-4851903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
124, 6
               

               
Conread position:
               
30-359
               

               
Cow position:
               
chr16:30662379-30662060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
107, 42
               

               
Conread position:
               
30-361
               

               
Cow position:
               
chr16:22206958-22207269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
26, 35
               

               
Conread position:
               
31-276
               

               
Cow position:
               
chr16:17903766-17903518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
81, 121
               

               
Conread position:
               
31-362
               

               
Cow position:
               
chr16:54226715-54226402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
288, 116
               

               
Conread position:
               
34-273
               

               
Cow position:
               
chr16:11939928-11940159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
40-348
               

               
Cow position:
               
chr16:40514588-40514292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 81
               

               
Conread position:
               
41-212
               

               
Cow position:
               
chr16:1725184-1725012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 109
               

               
Conread position:
               
41-351
               

               
Cow position:
               
chr16:45121932-45122246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 53
               

               
Conread position:
               
41-361
               

               
Cow position:
               
chr16:10032533-10032856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
228, 91
               

               
Conread position:
               
42-262
               

               
Cow position:
               
chr16:50667180-50667403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
72, 113
               

               
Conread position:
               
44-335
               

               
Cow position:
               
chr16:48917363-48917663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
74, 114
               

               
Conread position:
               
46-275
               

               
Cow position:
               
chr16:21039926-21040154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
71, 39
               

               
Conread position:
               
51-252
               

               
Cow position:
               
chr16:32807389-32807191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
53-343
               

               
Cow position:
               
chr16:26030979-26030680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 74
               

               
Conread position:
               
56-331
               

               
Cow position:
               
chr16:16570823-16571084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
263, 68
               

               
Conread position:
               
57-400
               

               
Cow position:
               
chr16:30036144-30036490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
155, 59
               

               
Conread position:
               
59-214
               

               
Cow position:
               
chr16:22124055-22123906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
59-261
               

               
Cow position:
               
chr16:18141417-18141216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
48, 88
               

               
Conread position:
               
59-276
               

               
Cow position:
               
chr16:43674786-43674999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
146, 42
               

               
Conread position:
               
59-320
               

               
Cow position:
               
chr16:13578950-13578685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
210, 58
               

               
Conread position:
               
59-328
               

               
Cow position:
               
chr16:2417678-2417405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
221, 58
               

               
Conread position:
               
59-347
               

               
Cow position:
               
chr16:8193367-8193656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
59-349
               

               
Cow position:
               
chr16:39516693-39516394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
32, 99
               

               
Conread position:
               
59-350
               

               
Cow position:
               
chr16:45731477-45731202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
59-362
               

               
Cow position:
               
chr16:33869849-33869532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
181, 60
               

               
Conread position:
               
59-364
               

               
Cow position:
               
chr16:11660535-11660254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
260, 49
               

               
Conread position:
               
59-367
               

               
Cow position:
               
chr16:6344531-6344237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 49
               

               
Conread position:
               
59-375
               

               
Cow position:
               
chr16:20871938-20872238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
60-320
               

               
Cow position:
               
chr16:27701340-27701093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
63-255
               

               
Cow position:
               
chr16:7980707-7980894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
63-268
               

               
Cow position:
               
chr16:34220099-34220303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
46, 74
               

               
Conread position:
               
63-297
               

               
Cow position:
               
chr16:21317680-21317453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
51, 23
               

               
Conread position:
               
63-343
               

               
Cow position:
               
chr16:56358352-56358088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
256, 24
               

               
Conread position:
               
63-348
               

               
Cow position:
               
chr16:45700567-45700279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
140, 51
               

               
Conread position:
               
63-356
               

               
Cow position:
               
chr16:32426805-32426516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
195, 60
               

               
Conread position:
               
63-360
               

               
Cow position:
               
chr16:14324278-14323985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
201, 56
               

               
Conread position:
               
63-361
               

               
Cow position:
               
chr16:17135144-17134846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 23
               

               
Conread position:
               
63-361
               

               
Cow position:
               
chr16:19052555-19052845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 19
               

               
Conread position:
               
63-361
               

               
Cow position:
               
chr16:29527740-29528053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
49, 9
               

               
Conread position:
               
63-361
               

               
Cow position:
               
chr16:33134857-33135140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
64-276
               

               
Cow position:
               
chr16:3114454-3114664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
65-202
               

               
Cow position:
               
chr16:35477499-35477363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 63
               

               
Conread position:
               
65-284
               

               
Cow position:
               
chr16:33054566-33054348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
48, 64
               

               
Conread position:
               
65-284
               

               
Cow position:
               
chr16:53792901-53792686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
118, 55
               

               
Conread position:
               
65-359
               

               
Cow position:
               
chr16:13696761-13696467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
218, 32
               

               
Conread position:
               
65-361
               

               
Cow position:
               
chr16:44428797-44429092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
49, 84
               

               
Conread position:
               
65-407
               

               
Cow position:
               
chr16:50943300-50943645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
66-267
               

               
Cow position:
               
chr16:16933037-16933235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
110, 47
               

               
Conread position:
               
66-272
               

               
Cow position:
               
chr16:42240968-42241166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
66-360
               

               
Cow position:
               
chr16:56671002-56670697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
75, 61
               

               
Conread position:
               
67-252
               

               
Cow position:
               
chr16:50382616-50382434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 19
               

               
Conread position:
               
67-348
               

               
Cow position:
               
chr16:44138583-44138290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 138
               

               
Conread position:
               
68-298
               

               
Cow position:
               
chr16:40700808-40700590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
69-239
               

               
Cow position:
               
chr16:50370517-50370683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
69-359
               

               
Cow position:
               
chr16:8462157-8461871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
52, 67
               

               
Conread position:
               
69-364
               

               
Cow position:
               
chr16:30305893-30305603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 79
               

               
Conread position:
               
70-255
               

               
Cow position:
               
chr16:38091302-38091118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
68, 80
               

               
Conread position:
               
71-347
               

               
Cow position:
               
chr16:9552984-9553249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
73-364
               

               
Cow position:
               
chr16:8530959-8530681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
165, 76
               

               
Conread position:
               
74-347
               

               
Cow position:
               
chr16:44239330-44239626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
128, 71
               

               
Conread position:
               
76-367
               

               
Cow position:
               
chr16:11135054-11134766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 71
               

               
Conread position:
               
78-276
               

               
Cow position:
               
chr16:496445-496251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
79-343
               

               
Cow position:
               
chr16:42977394-42977670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
40, 71
               

               
Conread position:
               
80-268
               

               
Cow position:
               
chr16:22919399-22919584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
32, 37
               

               
Conread position:
               
81-343
               

               
Cow position:
               
chr16:31561685-31561950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 35
               

               
Conread position:
               
81-360
               

               
Cow position:
               
chr16:20824417-20824689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 16
               

               
Conread position:
               
86-350
               

               
Cow position:
               
chr16:45294481-45294749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 45
               

               
Conread position:
               
86-352
               

               
Cow position:
               
chr16:31880824-31880547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
162, 30
               

               
Conread position:
               
86-361
               

               
Cow position:
               
chr16:11584459-11584194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
89, 34
               

               
Conread position:
               
86-385
               

               
Cow position:
               
chr16:16816762-16817070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
105, 63
               

               
Conread position:
               
88-290
               

               
Cow position:
               
chr16:45785675-45785878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
19, 60
               

               
Conread position:
               
88-345
               

               
Cow position:
               
chr16:12077538-12077283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
181, 19
               

               
Conread position:
               
94-348
               

               
Cow position:
               
chr16:28444542-28444286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
165, 13
               

               
Conread position:
               
97-360
               

               
Cow position:
               
chr16:56243936-56243672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
223, 19
               

               
Conread position:
               
100-371
               

               
Cow position:
               
chr16:20921107-20921374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
106-361
               

               
Cow position:
               
chr16:27728214-27728463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
22, 143
               

               
Conread position:
               
106-364
               

               
Cow position:
               
chr16:6016425-6016165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 49
               

               
Conread position:
               
108-346
               

               
Cow position:
               
chr16:7626120-7626352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
209, 8
               

               
Conread position:
               
109-276
               

               
Cow position:
               
chr16:17292061-17291896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
134, 15
               

               
Conread position:
               
110-350
               

               
Cow position:
               
chr16:56595428-56595184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
110-358
               

               
Cow position:
               
chr16:15407595-15407345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
173, 14
               

               
Conread position:
               
115-361
               

               
Cow position:
               
chr16:21370221-21369978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
133, 32
               

               
Conread position:
               
116-239
               

               
Cow position:
               
chr16:9597484-9597362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
116-279
               

               
Cow position:
               
chr16:33235194-33235034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
132, 30
               

               
Conread position:
               
116-343
               

               
Cow position:
               
chr16:17460133-17460373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
117-361
               

               
Cow position:
               
chr16:48613507-48613263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
202, 18
               

               
Conread position:
               
120-348
               

               
Cow position:
               
chr16:7723672-7723900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
199, 26
               

               
Conread position:
               
121-354
               

               
Cow position:
               
chr16:25484311-25484524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
121-367
               

               
Cow position:
               
chr16:1582954-1582708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 28
               

               
Conread position:
               
126-361
               

               
Cow position:
               
chr16:31149355-31149588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 25
               

               
Conread position:
               
127-337
               

               
Cow position:
               
chr16:32893606-32893809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
190, 20
               

               
Conread position:
               
127-361
               

               
Cow position:
               
chr16:11390308-11390061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
113, 232
               

               
Conread position:
               
128-255
               

               
Cow position:
               
chr16:19815268-19815141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
120, 21
               

               
Conread position:
               
131-343
               

               
Cow position:
               
chr16:7546844-7546640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
189, 18
               

               
Conread position:
               
133-343
               

               
Cow position:
               
chr16:9958813-9959025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 16
               

               
Conread position:
               
133-366
               

               
Cow position:
               
chr16:29026192-29026432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
126, 13
               

               
Conread position:
               
134-264
               

               
Cow position:
               
chr16:40540321-40540446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
136-374
               

               
Cow position:
               
chr16:13996208-13995974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
134, 11
               

               
Conread position:
               
137-335
               

               
Cow position:
               
chr16:7812678-7812881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
144, 10
               

               
Conread position:
               
137-346
               

               
Cow position:
               
chr16:15905262-15905044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
132, 10
               

               
Conread position:
               
137-348
               

               
Cow position:
               
chr16:14376770-14376982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
120, 12
               

               
Conread position:
               
137-356
               

               
Cow position:
               
chr16:11359139-11359357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
182, 10
               

               
Conread position:
               
137-361
               

               
Cow position:
               
chr16:24142971-24142740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
111, 57
               

               
Conread position:
               
137-367
               

               
Cow position:
               
chr16:7496245-7496467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
138-337
               

               
Cow position:
               
chr16:31484673-31484476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
42, 9
               

               
Conread position:
               
138-356
               

               
Cow position:
               
chr16:12324444-12324662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
181, 9
               

               
Conread position:
               
139-356
               

               
Cow position:
               
chr16:12220671-12220894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
131, 8
               

               
Conread position:
               
139-361
               

               
Cow position:
               
chr16:29636241-29636032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
182, 10
               

               
Conread position:
               
142-335
               

               
Cow position:
               
chr16:17736230-17736416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 62
               

               
Conread position:
               
146-341
               

               
Cow position:
               
chr16:16025432-16025638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
149-335
               

               
Cow position:
               
chr16:34205065-34204877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
167, 98
               

               
Conread position:
               
149-343
               

               
Cow position:
               
chr16:49174290-49174492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
121, 34
               

               
Conread position:
               
149-368
               

               
Cow position:
               
chr16:7928386-7928162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
132, 92
               

               
Conread position:
               
153-361
               

               
Cow position:
               
chr16:39385494-39385699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
154-345
               

               
Cow position:
               
chr16:19402758-19402567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
141, 93
               

               
Conread position:
               
154-352
               

               
Cow position:
               
chr16:9513298-9513497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
163, 105
               

               
Conread position:
               
154-352
               

               
Cow position:
               
chr16:53451709-53451910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
110, 117
               

               
Conread position:
               
154-361
               

               
Cow position:
               
chr16:41807098-41806910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
154-364
               

               
Cow position:
               
chr16:19478761-19478551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 107
               

               
Conread position:
               
156-350
               

               
Cow position:
               
chr16:12091657-12091449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
156-358
               

               
Cow position:
               
chr16:15714115-15714325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
127, 85
               

               
Conread position:
               
157-348
               

               
Cow position:
               
chr16:7912136-7912328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
158, 43
               

               
Conread position:
               
159-360
               

               
Cow position:
               
chr16:28979841-28980045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
82, 121
               

               
Conread position:
               
159-361
               

               
Cow position:
               
chr16:8953670-8953459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
113, 27
               

               
Conread position:
               
159-361
               

               
Cow position:
               
chr16:30211463-30211661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
160, 100
               

               
Conread position:
               
159-361
               

               
Cow position:
               
chr16:43758637-43758431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
121, 82
               

               
Conread position:
               
161-349
               

               
Cow position:
               
chr16:33290395-33290589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
119, 77
               

               
Conread position:
               
161-353
               

               
Cow position:
               
chr16:33430782-33430966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
160, 61
               

               
Conread position:
               
162-359
               

               
Cow position:
               
chr16:10249807-10249604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
122, 79
               

               
Conread position:
               
164-347
               

               
Cow position:
               
chr16:16178046-16178225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
157, 77
               

               
Conread position:
               
164-370
               

               
Cow position:
               
chr16:21044310-21044521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
119, 77
               

               
Conread position:
               
165-365
               

               
Cow position:
               
chr16:45826703-45826504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
45, 84
               

               
Conread position:
               
170-356
               

               
Cow position:
               
chr16:28233285-28233095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
100, 71
               

               
Conread position:
               
170-361
               

               
Cow position:
               
chr16:21442591-21442394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
97, 59
               

               
Conread position:
               
171-348
               

               
Cow position:
               
chr16:50569284-50569461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
148, 88
               

               
Conread position:
               
171-350
               

               
Cow position:
               
chr16:4616662-4616481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
148, 72
               

               
Conread position:
               
171-361
               

               
Cow position:
               
chr16:9097044-9097241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
109, 67
               

               
Conread position:
               
172-335
               

               
Cow position:
               
chr16:51143821-51143987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
89, 66
               

               
Conread position:
               
178-345
               

               
Cow position:
               
chr16:15252024-15251862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
133, 69
               

               
Conread position:
               
181-364
               

               
Cow position:
               
chr16:11775963-11775782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
141, 78
               

               
Conread position:
               
183-343
               

               
Cow position:
               
chr16:31011360-31011524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
183-347
               

               
Cow position:
               
chr16:41696041-41696206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
139, 75
               

               
Conread position:
               
183-347
               

               
Cow position:
               
chr16:48130362-48130196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
137, 75
               

               
Conread position:
               
183-352
               

               
Cow position:
               
chr16:8206051-8205875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 116
               

               
Conread position:
               
184-337
               

               
Cow position:
               
chr16:5396783-5396626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
100, 63
               

               
Conread position:
               
184-348
               

               
Cow position:
               
chr16:49734112-49733944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
184-360
               

               
Cow position:
               
chr16:30897965-30897793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
87, 136
               

               
Conread position:
               
184-371
               

               
Cow position:
               
chr16:3938977-3938790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
133, 74
               

               
Conread position:
               
186-359
               

               
Cow position:
               
chr16:56285651-56285483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
130, 61
               

               
Conread position:
               
187-350
               

               
Cow position:
               
chr16:23515729-23515562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
187-364
               

               
Cow position:
               
chr16:12111929-12111752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
135, 60
               

               
Conread position:
               
187-364
               

               
Cow position:
               
chr16:17617326-17617145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
95, 72
               

               
Conread position:
               
195-351
               

               
Cow position:
               
chr16:35477091-35476937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
196-361
               

               
Cow position:
               
chr16:51393345-51393173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 67
               

               
Conread position:
               
205-336
               

               
Cow position:
               
chr16:41653028-41653161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
116, 54
               

               
Conread position:
               
210-361
               

               
Cow position:
               
chr16:7727983-7727827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
30, 141
               

               
Conread position:
               
217-347
               

               
Cow position:
               
chr16:35363264-35363136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
235-359
               

               
Cow position:
               
chr16:11105699-11105826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
249-364
               

               
Cow position:
               
chr16:20070244-20070357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               
Show alignments to all cow chromosomes.