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Cow genome map

           
Conread name:
           
Ova1-OVRM10125H10
        

               
Conread position:
               
1-119
               

               
Cow position:
               
chr21:14515768-14515886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr21:28443457-28443285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
45, 57
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr21:18041931-18041745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
121, 107
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr21:4795144-4795334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr21:23150104-23149902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr21:2367251-2367456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr21:17856464-17856670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
127, 33
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr21:36789714-36789939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
105, 34
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr21:45330687-45330449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 110
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr21:2679473-2679716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
112, 87
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr21:28442663-28442909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
245, 82
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr21:31090503-31090260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
216, 69
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr21:395787-396047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr21:25764555-25764820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
128, 55
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr21:12801830-12801557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 51
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr21:29484896-29485166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 147
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr21:36297407-36297686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 147
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr21:5392622-5392342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 24
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr21:13365255-13365541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 149
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr21:27624626-27624894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
275, 103
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr21:30250273-30250006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
268, 55
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr21:35569462-35569136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
164, 46
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr21:22860916-22861240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 147
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr21:8351386-8351043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
129, 47
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr21:31691399-31691723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 128
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr21:20160600-20160931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 35
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr21:23822084-23822405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
318, 111
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr21:24598578-24598902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 80
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr21:29214234-29213900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 40
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr21:24858232-24858577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 73
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr21:28733995-28733650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
247, 35
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr21:29069412-29069061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 113
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr21:20262416-20262084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 64
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr21:27229878-27229540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 148
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr21:957589-957933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 59
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr21:20260404-20260033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 144
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr21:21216224-21215893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
261, 35
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr21:33982888-33982550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 33
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr21:12462053-12461700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 147
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr21:27810325-27810660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
264, 107
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr21:45906704-45906346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 114
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr21:10816939-10817312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
31, 160
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr21:14452153-14452509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
268, 96
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr21:44658499-44658837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
321, 84
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr21:44825968-44825599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 74
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr21:34653994-34654347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 41
               

               
Conread position:
               
1-365
               

               
Cow position:
               
chr21:29002241-29001863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 148
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr21:30592387-30592034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 81
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr21:41974458-41974083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
235, 113
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr21:48234242-48233893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
186, 21
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr21:16612543-16612712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
2-216
               

               
Cow position:
               
chr21:23192596-23192380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
128, 114
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr21:36795518-36795800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
104, 146
               

               
Conread position:
               
2-348
               

               
Cow position:
               
chr21:19196245-19195895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
30, 111
               

               
Conread position:
               
2-355
               

               
Cow position:
               
chr21:37479877-37480235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 79
               

               
Conread position:
               
2-361
               

               
Cow position:
               
chr21:22856136-22856503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 55
               

               
Conread position:
               
2-374
               

               
Cow position:
               
chr21:11740198-11739830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 49
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr21:4905050-4904830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
33, 107
               

               
Conread position:
               
3-238
               

               
Cow position:
               
chr21:9940275-9940037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
46, 113
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr21:30990351-30990111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-264
               

               
Cow position:
               
chr21:18941911-18941657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
132, 59
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr21:31662383-31662645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 90
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr21:35997092-35997349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
52, 104
               

               
Conread position:
               
3-351
               

               
Cow position:
               
chr21:37790083-37789735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
28, 19
               

               
Conread position:
               
3-361
               

               
Cow position:
               
chr21:33580332-33580687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
29, 18
               

               
Conread position:
               
3-363
               

               
Cow position:
               
chr21:30222263-30222621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 62
               

               
Conread position:
               
4-130
               

               
Cow position:
               
chr21:45375543-45375668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
4-214
               

               
Cow position:
               
chr21:13840242-13840453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 125
               

               
Conread position:
               
4-215
               

               
Cow position:
               
chr21:13488442-13488655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
115, 145
               

               
Conread position:
               
4-219
               

               
Cow position:
               
chr21:43357341-43357124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 91
               

               
Conread position:
               
4-235
               

               
Cow position:
               
chr21:47215261-47215047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
4-236
               

               
Cow position:
               
chr21:34391055-34390826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
4-238
               

               
Cow position:
               
chr21:39401514-39401741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
133, 110
               

               
Conread position:
               
4-260
               

               
Cow position:
               
chr21:1591472-1591726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
4-263
               

               
Cow position:
               
chr21:28626160-28626413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
124, 112
               

               
Conread position:
               
4-265
               

               
Cow position:
               
chr21:33210122-33210366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
4-266
               

               
Cow position:
               
chr21:18845095-18844833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
115, 144
               

               
Conread position:
               
4-268
               

               
Cow position:
               
chr21:45850791-45850527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
119, 53
               

               
Conread position:
               
4-275
               

               
Cow position:
               
chr21:33562933-33563190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
28, 72
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr21:18790640-18790376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
27, 110
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr21:33350666-33350929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr21:7581986-7581710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
82, 128
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr21:3818127-3818404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
29, 113
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr21:10633721-10633445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
27, 126
               

               
Conread position:
               
4-328
               

               
Cow position:
               
chr21:31253463-31253777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 113
               

               
Conread position:
               
4-330
               

               
Cow position:
               
chr21:3361091-3360770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
110, 9
               

               
Conread position:
               
4-332
               

               
Cow position:
               
chr21:7825257-7824942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
229, 99
               

               
Conread position:
               
4-336
               

               
Cow position:
               
chr21:16152351-16152692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
32, 150
               

               
Conread position:
               
4-336
               

               
Cow position:
               
chr21:22121442-22121754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
317, 45
               

               
Conread position:
               
4-336
               

               
Cow position:
               
chr21:30231778-30231444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 95
               

               
Conread position:
               
4-337
               

               
Cow position:
               
chr21:47465201-47464866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 25
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr21:1058997-1059317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
33, 125
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr21:22210324-22209984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
273, 109
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr21:38900698-38901022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
317, 88
               

               
Conread position:
               
4-347
               

               
Cow position:
               
chr21:81999-82322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 109
               

               
Conread position:
               
4-347
               

               
Cow position:
               
chr21:7673046-7673376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 64
               

               
Conread position:
               
4-347
               

               
Cow position:
               
chr21:23586800-23587135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
128, 110
               

               
Conread position:
               
4-347
               

               
Cow position:
               
chr21:32339818-32339482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
38, 111
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr21:3585443-3585100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
262, 45
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr21:4399717-4400057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 137
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr21:5426859-5427191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
31, 113
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr21:6051427-6051769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 88
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr21:45971253-45970915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
33, 110
               

               
Conread position:
               
4-351
               

               
Cow position:
               
chr21:32297587-32297241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
244, 75
               

               
Conread position:
               
4-351
               

               
Cow position:
               
chr21:34010476-34010129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
104, 30
               

               
Conread position:
               
4-352
               

               
Cow position:
               
chr21:46957-47316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
77, 111
               

               
Conread position:
               
4-352
               

               
Cow position:
               
chr21:643248-643588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
4-352
               

               
Cow position:
               
chr21:9477082-9477433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 86
               

               
Conread position:
               
4-358
               

               
Cow position:
               
chr21:15911319-15911652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
49, 145
               

               
Conread position:
               
4-359
               

               
Cow position:
               
chr21:6833968-6834324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
32, 118
               

               
Conread position:
               
4-359
               

               
Cow position:
               
chr21:20152867-20153232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 131
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr21:27569240-27568883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 37
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr21:42135700-42135343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 147
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr21:8206692-8207034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
109, 35
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr21:13089549-13089191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
126, 61
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr21:14464499-14464865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 95
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr21:18155650-18155285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
32, 119
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr21:23980262-23979902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
33, 105
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr21:41155783-41156147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
111, 83
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr21:49700116-49699758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
32, 102
               

               
Conread position:
               
4-368
               

               
Cow position:
               
chr21:9301132-9301508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 113
               

               
Conread position:
               
5-174
               

               
Cow position:
               
chr21:12960978-12960812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
116, 86
               

               
Conread position:
               
5-223
               

               
Cow position:
               
chr21:19363542-19363323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
59, 144
               

               
Conread position:
               
5-223
               

               
Cow position:
               
chr21:44515184-44515400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 55
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr21:37345180-37344950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 59
               

               
Conread position:
               
5-246
               

               
Cow position:
               
chr21:20418764-20418523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
32, 112
               

               
Conread position:
               
5-252
               

               
Cow position:
               
chr21:12617058-12617327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
117, 103
               

               
Conread position:
               
5-255
               

               
Cow position:
               
chr21:12723081-12723319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
5-255
               

               
Cow position:
               
chr21:35354454-35354701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
218, 115
               

               
Conread position:
               
5-258
               

               
Cow position:
               
chr21:42540295-42540050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
233, 51
               

               
Conread position:
               
5-263
               

               
Cow position:
               
chr21:724965-724703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 142
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr21:18828385-18828126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
106, 38
               

               
Conread position:
               
5-273
               

               
Cow position:
               
chr21:28924035-28924295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 55
               

               
Conread position:
               
5-284
               

               
Cow position:
               
chr21:42414180-42413900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
8, 51
               

               
Conread position:
               
5-303
               

               
Cow position:
               
chr21:9990437-9990727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
267, 51
               

               
Conread position:
               
5-332
               

               
Cow position:
               
chr21:10410139-10410471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
28, 111
               

               
Conread position:
               
5-332
               

               
Cow position:
               
chr21:10561663-10561337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 120
               

               
Conread position:
               
5-347
               

               
Cow position:
               
chr21:802374-802060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 56
               

               
Conread position:
               
5-347
               

               
Cow position:
               
chr21:47714086-47713745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
5-348
               

               
Cow position:
               
chr21:37706494-37706148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
26, 42
               

               
Conread position:
               
5-348
               

               
Cow position:
               
chr21:42841677-42841321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
102, 42
               

               
Conread position:
               
5-358
               

               
Cow position:
               
chr21:27521412-27521067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
27, 94
               

               
Conread position:
               
5-359
               

               
Cow position:
               
chr21:37299390-37299734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 27
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr21:18800608-18800253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
165, 75
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr21:29978835-29978496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
339, 49
               

               
Conread position:
               
6-272
               

               
Cow position:
               
chr21:21077248-21077494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
262, 95
               

               
Conread position:
               
6-273
               

               
Cow position:
               
chr21:42384431-42384694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
31, 109
               

               
Conread position:
               
6-274
               

               
Cow position:
               
chr21:22465119-22465376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
6-312
               

               
Cow position:
               
chr21:19258751-19259041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
7-237
               

               
Cow position:
               
chr21:16187885-16187657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
7-238
               

               
Cow position:
               
chr21:41878394-41878620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
99, 114
               

               
Conread position:
               
7-349
               

               
Cow position:
               
chr21:28244392-28244732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
312, 140
               

               
Conread position:
               
7-357
               

               
Cow position:
               
chr21:5898476-5898135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
314, 90
               

               
Conread position:
               
8-215
               

               
Cow position:
               
chr21:46552182-46551975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 140
               

               
Conread position:
               
8-221
               

               
Cow position:
               
chr21:10601450-10601241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
102, 49
               

               
Conread position:
               
8-238
               

               
Cow position:
               
chr21:23801204-23800977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
8-265
               

               
Cow position:
               
chr21:45355760-45356011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
8-273
               

               
Cow position:
               
chr21:28190956-28191217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
99, 60
               

               
Conread position:
               
8-276
               

               
Cow position:
               
chr21:26244844-26245102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
8-276
               

               
Cow position:
               
chr21:28989538-28989804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
105, 73
               

               
Conread position:
               
8-289
               

               
Cow position:
               
chr21:38121025-38121301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
8-300
               

               
Cow position:
               
chr21:20192821-20193105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
287, 118
               

               
Conread position:
               
8-328
               

               
Cow position:
               
chr21:36909858-36910171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 94
               

               
Conread position:
               
8-337
               

               
Cow position:
               
chr21:30835286-30835619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 139
               

               
Conread position:
               
8-346
               

               
Cow position:
               
chr21:11645046-11644704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 143
               

               
Conread position:
               
8-347
               

               
Cow position:
               
chr21:46849202-46848869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
29, 51
               

               
Conread position:
               
8-359
               

               
Cow position:
               
chr21:41621048-41621402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
261, 106
               

               
Conread position:
               
8-363
               

               
Cow position:
               
chr21:9416170-9416522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
27, 111
               

               
Conread position:
               
8-369
               

               
Cow position:
               
chr21:39403613-39403246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
29, 248
               

               
Conread position:
               
9-276
               

               
Cow position:
               
chr21:4280747-4280485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
244, 59
               

               
Conread position:
               
9-283
               

               
Cow position:
               
chr21:33645-33914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
33, 106
               

               
Conread position:
               
9-285
               

               
Cow position:
               
chr21:33263774-33264043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
106, 65
               

               
Conread position:
               
9-361
               

               
Cow position:
               
chr21:17560004-17559640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
144, 105
               

               
Conread position:
               
10-171
               

               
Cow position:
               
chr21:27079915-27079752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 65
               

               
Conread position:
               
10-345
               

               
Cow position:
               
chr21:8349254-8349583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 138
               

               
Conread position:
               
11-343
               

               
Cow position:
               
chr21:15544291-15543980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
309, 109
               

               
Conread position:
               
12-240
               

               
Cow position:
               
chr21:18842306-18842084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
12-254
               

               
Cow position:
               
chr21:45921131-45920891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
9, 105
               

               
Conread position:
               
12-267
               

               
Cow position:
               
chr21:25382941-25383205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 144
               

               
Conread position:
               
12-284
               

               
Cow position:
               
chr21:19673732-19674002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
30, 105
               

               
Conread position:
               
12-284
               

               
Cow position:
               
chr21:46264100-46264366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
12-331
               

               
Cow position:
               
chr21:14760501-14760804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
30, 65
               

               
Conread position:
               
12-346
               

               
Cow position:
               
chr21:16569829-16570151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 115
               

               
Conread position:
               
12-350
               

               
Cow position:
               
chr21:40266049-40266391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
22, 106
               

               
Conread position:
               
12-356
               

               
Cow position:
               
chr21:38449519-38449179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 135
               

               
Conread position:
               
12-359
               

               
Cow position:
               
chr21:1511219-1511560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
82, 103
               

               
Conread position:
               
12-360
               

               
Cow position:
               
chr21:41590632-41590291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 69
               

               
Conread position:
               
12-361
               

               
Cow position:
               
chr21:33414157-33413822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
36, 48
               

               
Conread position:
               
12-361
               

               
Cow position:
               
chr21:47719371-47719029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 46
               

               
Conread position:
               
12-367
               

               
Cow position:
               
chr21:40589551-40589197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
94, 23
               

               
Conread position:
               
13-271
               

               
Cow position:
               
chr21:45262883-45262626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 74
               

               
Conread position:
               
14-348
               

               
Cow position:
               
chr21:42500967-42501316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
14-366
               

               
Cow position:
               
chr21:34663555-34663900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
70, 5
               

               
Conread position:
               
15-343
               

               
Cow position:
               
chr21:30849017-30848689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
108, 99
               

               
Conread position:
               
15-348
               

               
Cow position:
               
chr21:44214055-44214375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 121
               

               
Conread position:
               
15-352
               

               
Cow position:
               
chr21:641514-641852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 107
               

               
Conread position:
               
16-295
               

               
Cow position:
               
chr21:19766786-19767065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 99
               

               
Conread position:
               
16-306
               

               
Cow position:
               
chr21:8549611-8549902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 101
               

               
Conread position:
               
16-343
               

               
Cow position:
               
chr21:47764183-47763867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
261, 98
               

               
Conread position:
               
16-349
               

               
Cow position:
               
chr21:3763809-3763486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
26, 92
               

               
Conread position:
               
16-361
               

               
Cow position:
               
chr21:6909948-6909613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
16, 99
               

               
Conread position:
               
17-356
               

               
Cow position:
               
chr21:32559426-32559100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 54
               

               
Conread position:
               
19-229
               

               
Cow position:
               
chr21:10514739-10514949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
164, 128
               

               
Conread position:
               
19-360
               

               
Cow position:
               
chr21:5970904-5970571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
13, 102
               

               
Conread position:
               
19-361
               

               
Cow position:
               
chr21:7394316-7394640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 129
               

               
Conread position:
               
19-362
               

               
Cow position:
               
chr21:41140783-41140440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 104
               

               
Conread position:
               
20-361
               

               
Cow position:
               
chr21:12339575-12339893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
92, 35
               

               
Conread position:
               
21-259
               

               
Cow position:
               
chr21:297689-297925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 45
               

               
Conread position:
               
22-367
               

               
Cow position:
               
chr21:8426379-8426722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 99
               

               
Conread position:
               
25-350
               

               
Cow position:
               
chr21:18060016-18059693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 32
               

               
Conread position:
               
25-361
               

               
Cow position:
               
chr21:28919582-28919252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
294, 10
               

               
Conread position:
               
26-239
               

               
Cow position:
               
chr21:35899786-35899993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
28-234
               

               
Cow position:
               
chr21:46143903-46144106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
30-183
               

               
Cow position:
               
chr21:41598064-41598216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
104, 94
               

               
Conread position:
               
30-343
               

               
Cow position:
               
chr21:5464693-5465006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
99, 119
               

               
Conread position:
               
30-356
               

               
Cow position:
               
chr21:47363792-47363452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
88, 95
               

               
Conread position:
               
30-359
               

               
Cow position:
               
chr21:22014133-22014465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 63
               

               
Conread position:
               
30-360
               

               
Cow position:
               
chr21:17890249-17890579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
256, 86
               

               
Conread position:
               
34-360
               

               
Cow position:
               
chr21:41522457-41522137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 74
               

               
Conread position:
               
39-361
               

               
Cow position:
               
chr21:71538-71861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 8
               

               
Conread position:
               
41-359
               

               
Cow position:
               
chr21:29014956-29014642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
77, 106
               

               
Conread position:
               
44-255
               

               
Cow position:
               
chr21:37235345-37235553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
49-311
               

               
Cow position:
               
chr21:29014595-29014334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
70, 28
               

               
Conread position:
               
50-347
               

               
Cow position:
               
chr21:14027020-14027329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 103
               

               
Conread position:
               
54-358
               

               
Cow position:
               
chr21:28030258-28030551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
56-353
               

               
Cow position:
               
chr21:12354722-12354433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
8, 31
               

               
Conread position:
               
57-346
               

               
Cow position:
               
chr21:14126261-14126534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
262, 16
               

               
Conread position:
               
58-353
               

               
Cow position:
               
chr21:13585081-13584783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
11, 63
               

               
Conread position:
               
58-354
               

               
Cow position:
               
chr21:8950154-8950463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
59-246
               

               
Cow position:
               
chr21:20183044-20183230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
13, 70
               

               
Conread position:
               
59-260
               

               
Cow position:
               
chr21:30607114-30606912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
146, 88
               

               
Conread position:
               
59-283
               

               
Cow position:
               
chr21:734571-734784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
59-350
               

               
Cow position:
               
chr21:19060112-19059824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
213, 54
               

               
Conread position:
               
59-357
               

               
Cow position:
               
chr21:36763024-36763335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
55, 98
               

               
Conread position:
               
59-361
               

               
Cow position:
               
chr21:20165616-20165919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
57, 68
               

               
Conread position:
               
59-361
               

               
Cow position:
               
chr21:38720227-38720526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 64
               

               
Conread position:
               
60-350
               

               
Cow position:
               
chr21:45835426-45835124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
118, 59
               

               
Conread position:
               
63-366
               

               
Cow position:
               
chr21:36696111-36695811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
221, 56
               

               
Conread position:
               
63-366
               

               
Cow position:
               
chr21:44829783-44829475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 66
               

               
Conread position:
               
63-372
               

               
Cow position:
               
chr21:42209652-42209361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 51
               

               
Conread position:
               
65-198
               

               
Cow position:
               
chr21:44733192-44733062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 57
               

               
Conread position:
               
65-354
               

               
Cow position:
               
chr21:742266-742543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 82
               

               
Conread position:
               
66-255
               

               
Cow position:
               
chr21:47160199-47160386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
67-320
               

               
Cow position:
               
chr21:829227-828977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 10
               

               
Conread position:
               
67-320
               

               
Cow position:
               
chr21:38692186-38692436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 31
               

               
Conread position:
               
69-347
               

               
Cow position:
               
chr21:9256672-9256393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 79
               

               
Conread position:
               
69-361
               

               
Cow position:
               
chr21:44724380-44724101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
73-349
               

               
Cow position:
               
chr21:38918192-38918467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 34
               

               
Conread position:
               
74-370
               

               
Cow position:
               
chr21:10147981-10148285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
95, 39
               

               
Conread position:
               
75-276
               

               
Cow position:
               
chr21:30980587-30980390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
57, 31
               

               
Conread position:
               
75-347
               

               
Cow position:
               
chr21:674675-674931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
75-348
               

               
Cow position:
               
chr21:21615765-21616040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 82
               

               
Conread position:
               
76-361
               

               
Cow position:
               
chr21:7169677-7169964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
6, 62
               

               
Conread position:
               
77-283
               

               
Cow position:
               
chr21:11057882-11057686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
81-275
               

               
Cow position:
               
chr21:9027309-9027504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 35
               

               
Conread position:
               
81-335
               

               
Cow position:
               
chr21:19240880-19240627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
31, 70
               

               
Conread position:
               
82-316
               

               
Cow position:
               
chr21:28599887-28600113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
219, 15
               

               
Conread position:
               
82-368
               

               
Cow position:
               
chr21:46599357-46599639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
45, 34
               

               
Conread position:
               
86-348
               

               
Cow position:
               
chr21:7394283-7394007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
185, 33
               

               
Conread position:
               
87-335
               

               
Cow position:
               
chr21:41287792-41287545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
87-343
               

               
Cow position:
               
chr21:36508244-36508489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
87-359
               

               
Cow position:
               
chr21:12104367-12104627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
99, 29
               

               
Conread position:
               
87-361
               

               
Cow position:
               
chr21:13588765-13589039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
179, 66
               

               
Conread position:
               
94-281
               

               
Cow position:
               
chr21:19360167-19359983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
97-360
               

               
Cow position:
               
chr21:36682334-36682601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
97-361
               

               
Cow position:
               
chr21:19868944-19868687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
33, 43
               

               
Conread position:
               
105-336
               

               
Cow position:
               
chr21:39319388-39319158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
163, 11
               

               
Conread position:
               
105-358
               

               
Cow position:
               
chr21:28907523-28907275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
113, 11
               

               
Conread position:
               
108-348
               

               
Cow position:
               
chr21:17252952-17252713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 12
               

               
Conread position:
               
111-352
               

               
Cow position:
               
chr21:20163734-20163976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
160, 16
               

               
Conread position:
               
113-361
               

               
Cow position:
               
chr21:48334764-48334508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
17, 45
               

               
Conread position:
               
115-344
               

               
Cow position:
               
chr21:24875380-24875612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
115-352
               

               
Cow position:
               
chr21:29658301-29658542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
21, 36
               

               
Conread position:
               
116-268
               

               
Cow position:
               
chr21:46451922-46451774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
117-361
               

               
Cow position:
               
chr21:16498550-16498792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 29
               

               
Conread position:
               
119-356
               

               
Cow position:
               
chr21:18341250-18341493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
14, 39
               

               
Conread position:
               
119-360
               

               
Cow position:
               
chr21:11678271-11678042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 29
               

               
Conread position:
               
121-350
               

               
Cow position:
               
chr21:6851207-6851431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
196, 28
               

               
Conread position:
               
121-350
               

               
Cow position:
               
chr21:22850957-22851182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
198, 20
               

               
Conread position:
               
122-385
               

               
Cow position:
               
chr21:39393784-39394049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 27
               

               
Conread position:
               
126-255
               

               
Cow position:
               
chr21:31147894-31147767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
127-238
               

               
Cow position:
               
chr21:7088641-7088751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
127-264
               

               
Cow position:
               
chr21:42348650-42348518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
128-348
               

               
Cow position:
               
chr21:40291704-40291485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
131-276
               

               
Cow position:
               
chr21:5342049-5341906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
131-348
               

               
Cow position:
               
chr21:26018424-26018645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
151, 16
               

               
Conread position:
               
134-312
               

               
Cow position:
               
chr21:30243633-30243460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
137-285
               

               
Cow position:
               
chr21:14228229-14228083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
138-358
               

               
Cow position:
               
chr21:40820801-40820576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
148, 9
               

               
Conread position:
               
139-350
               

               
Cow position:
               
chr21:25012135-25012344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
183, 8
               

               
Conread position:
               
139-367
               

               
Cow position:
               
chr21:11182606-11182832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
178, 13
               

               
Conread position:
               
140-354
               

               
Cow position:
               
chr21:15012493-15012700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
142-254
               

               
Cow position:
               
chr21:40210992-40210882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
145-347
               

               
Cow position:
               
chr21:30657928-30658124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
174, 102
               

               
Conread position:
               
149-354
               

               
Cow position:
               
chr21:40059090-40059286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
18, 122
               

               
Conread position:
               
149-359
               

               
Cow position:
               
chr21:24797719-24797928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
120, 41
               

               
Conread position:
               
149-362
               

               
Cow position:
               
chr21:20174380-20174588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
142, 98
               

               
Conread position:
               
152-346
               

               
Cow position:
               
chr21:8506481-8506285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
164, 95
               

               
Conread position:
               
152-346
               

               
Cow position:
               
chr21:8509369-8509173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
164, 95
               

               
Conread position:
               
153-291
               

               
Cow position:
               
chr21:17790892-17790760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
156-348
               

               
Cow position:
               
chr21:13883550-13883741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
66, 90
               

               
Conread position:
               
157-361
               

               
Cow position:
               
chr21:27409662-27409459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
114, 78
               

               
Conread position:
               
159-331
               

               
Cow position:
               
chr21:18783397-18783219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
90, 124
               

               
Conread position:
               
163-360
               

               
Cow position:
               
chr21:39845670-39845878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
61, 23
               

               
Conread position:
               
167-366
               

               
Cow position:
               
chr21:27744105-27744310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
74, 190
               

               
Conread position:
               
170-365
               

               
Cow position:
               
chr21:16796934-16797133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
170-372
               

               
Cow position:
               
chr21:1464426-1464631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
100, 184
               

               
Conread position:
               
171-343
               

               
Cow position:
               
chr21:16120078-16119903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
171-360
               

               
Cow position:
               
chr21:18449837-18450030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
115, 26
               

               
Conread position:
               
171-361
               

               
Cow position:
               
chr21:15305215-15305018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
99, 70
               

               
Conread position:
               
177-344
               

               
Cow position:
               
chr21:7460697-7460865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
143, 93
               

               
Conread position:
               
180-360
               

               
Cow position:
               
chr21:19220705-19220520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
103, 60
               

               
Conread position:
               
180-361
               

               
Cow position:
               
chr21:40930382-40930201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
142, 77
               

               
Conread position:
               
181-354
               

               
Cow position:
               
chr21:36398468-36398300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
141, 8
               

               
Conread position:
               
183-348
               

               
Cow position:
               
chr21:44732947-44732778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
74, 7
               

               
Conread position:
               
183-355
               

               
Cow position:
               
chr21:31462658-31462828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
136, 64
               

               
Conread position:
               
187-361
               

               
Cow position:
               
chr21:31659051-31658877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
135, 54
               

               
Conread position:
               
188-378
               

               
Cow position:
               
chr21:45376049-45376237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
130, 71
               

               
Conread position:
               
199-361
               

               
Cow position:
               
chr21:3595923-3595769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
199-361
               

               
Cow position:
               
chr21:5789474-5789635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
121, 12
               

               
Conread position:
               
203-359
               

               
Cow position:
               
chr21:23783726-23783572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
119, 55
               

               
Conread position:
               
209-347
               

               
Cow position:
               
chr21:42341816-42341678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
108, 48
               

               
Conread position:
               
209-360
               

               
Cow position:
               
chr21:11761685-11761840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
107, 57
               

               
Conread position:
               
209-360
               

               
Cow position:
               
chr21:30368198-30368350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
113, 48
               

               
Conread position:
               
211-348
               

               
Cow position:
               
chr21:37479469-37479326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
66, 47
               

               
Conread position:
               
227-399
               

               
Cow position:
               
chr21:35337783-35337610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
99, 50
               
Show alignments to all cow chromosomes.