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Cow genome map

           
Conread name:
           
Ova1-OVRM10125H10
        

               
Conread position:
               
1-157
               

               
Cow position:
               
chr24:11876714-11876870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
128, 147
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr24:29027873-29028035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr24:35794907-35794732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
120, 74
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr24:30178064-30178251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
113, 151
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr24:6487752-6487932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr24:39842020-39841802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
109, 148
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr24:7001235-7000987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
129, 67
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr24:19736499-19736255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr24:24250557-24250811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
115, 147
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr24:15373238-15373504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
21, 35
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr24:33222113-33221832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 115
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr24:43927493-43927232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr24:24061973-24061699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
76, 33
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr24:23187088-23186809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 54
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr24:5754667-5754967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr24:20874509-20874821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr24:31359155-31359460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr24:29781993-29782309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
102, 121
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr24:6912522-6912208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
115, 48
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr24:31816418-31816735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 16
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr24:31036182-31036501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
93, 48
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr24:40129951-40130301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 131
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr24:18374607-18374935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
50, 60
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr24:37037728-37038062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 35
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr24:24491181-24490851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 78
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr24:2402545-2402201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 116
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr24:10499043-10499394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 55
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr24:18474916-18474553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 160
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr24:28496754-28496407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 96
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr24:39483306-39483639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 107
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr24:30229300-30229651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
53, 39
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr24:15246806-15246481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 39
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr24:18732294-18731930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 167
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr24:43028493-43028149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
255, 36
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr24:28062781-28063132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 91
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr24:33372383-33372730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
45, 33
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr24:37650499-37650859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 125
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr24:17104741-17104386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 22
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr24:27906267-27906626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
31, 57
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr24:5141773-5142126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 105
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr24:6149857-6150179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr24:10125694-10126067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
32, 154
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr24:11886990-11887341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr24:29180717-29181086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
118, 131
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr24:36404315-36403966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 127
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr24:3165650-3166017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 49
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr24:18975030-18975310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
30, 242
               

               
Conread position:
               
2-346
               

               
Cow position:
               
chr24:27608268-27607937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 57
               

               
Conread position:
               
2-360
               

               
Cow position:
               
chr24:22689752-22689386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
36, 112
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr24:17492146-17492326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
3-272
               

               
Cow position:
               
chr24:29063817-29063563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
3-276
               

               
Cow position:
               
chr24:17955612-17955345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 107
               

               
Conread position:
               
3-283
               

               
Cow position:
               
chr24:28327253-28326973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
125, 72
               

               
Conread position:
               
3-291
               

               
Cow position:
               
chr24:33153608-33153890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
3-342
               

               
Cow position:
               
chr24:17860424-17860092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 53
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr24:34742586-34742925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
112, 53
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr24:7913833-7914186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
34, 146
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr24:27220260-27219911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
28, 115
               

               
Conread position:
               
3-351
               

               
Cow position:
               
chr24:16509801-16510150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
34, 142
               

               
Conread position:
               
3-352
               

               
Cow position:
               
chr24:6132042-6131708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 78
               

               
Conread position:
               
3-357
               

               
Cow position:
               
chr24:31812019-31812370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 84
               

               
Conread position:
               
4-114
               

               
Cow position:
               
chr24:17938594-17938703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
4-174
               

               
Cow position:
               
chr24:39219011-39218841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
27, 58
               

               
Conread position:
               
4-210
               

               
Cow position:
               
chr24:40673601-40673386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
46, 149
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr24:20024443-20024650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 107
               

               
Conread position:
               
4-220
               

               
Cow position:
               
chr24:16895604-16895392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
101, 90
               

               
Conread position:
               
4-225
               

               
Cow position:
               
chr24:27341188-27340969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 53
               

               
Conread position:
               
4-255
               

               
Cow position:
               
chr24:16556800-16556564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
4-255
               

               
Cow position:
               
chr24:27748479-27748720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
4-255
               

               
Cow position:
               
chr24:39226834-39227074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
4-263
               

               
Cow position:
               
chr24:29673351-29673609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
30, 122
               

               
Conread position:
               
4-268
               

               
Cow position:
               
chr24:29679475-29679220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
4-273
               

               
Cow position:
               
chr24:18970676-18970411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
33, 111
               

               
Conread position:
               
4-274
               

               
Cow position:
               
chr24:32070798-32071059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
67, 122
               

               
Conread position:
               
4-281
               

               
Cow position:
               
chr24:19769325-19769600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
4-305
               

               
Cow position:
               
chr24:19466098-19465785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
50, 156
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr24:18025136-18024836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
112, 31
               

               
Conread position:
               
4-320
               

               
Cow position:
               
chr24:17294360-17294050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
33, 117
               

               
Conread position:
               
4-332
               

               
Cow position:
               
chr24:7476521-7476190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
28, 112
               

               
Conread position:
               
4-335
               

               
Cow position:
               
chr24:23556495-23556174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
88, 40
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr24:28553715-28553401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr24:29595979-29595629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
24, 113
               

               
Conread position:
               
4-347
               

               
Cow position:
               
chr24:17311377-17311054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
4-347
               

               
Cow position:
               
chr24:35576703-35576362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
33, 112
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr24:3493724-3494057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
315, 51
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr24:18357221-18356881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 53
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr24:18999879-19000219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
27, 84
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr24:24457414-24457066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr24:27039874-27040226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
50, 149
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr24:34396342-34396014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
99, 125
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr24:42103201-42103537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
42, 78
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr24:44041181-44040834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
33, 157
               

               
Conread position:
               
4-352
               

               
Cow position:
               
chr24:15861769-15861411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
29, 57
               

               
Conread position:
               
4-359
               

               
Cow position:
               
chr24:31159449-31159816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
45, 56
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr24:33098660-33098282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
27, 159
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr24:33944236-33944594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
270, 55
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr24:41980837-41980473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 120
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr24:19535420-19535060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
32, 57
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr24:19800678-19801028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
27, 70
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr24:23695061-23694724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 59
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr24:28303520-28303174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
201, 23
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr24:28721723-28722065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
315, 111
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr24:32204962-32204596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
262, 104
               

               
Conread position:
               
4-362
               

               
Cow position:
               
chr24:12200581-12200217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
33, 143
               

               
Conread position:
               
4-377
               

               
Cow position:
               
chr24:16089068-16089435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
133, 51
               

               
Conread position:
               
4-395
               

               
Cow position:
               
chr24:1269630-1270005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 52
               

               
Conread position:
               
5-224
               

               
Cow position:
               
chr24:20250067-20249847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 123
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr24:27824291-27824550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
93, 32
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr24:3430567-3430825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
249, 15
               

               
Conread position:
               
5-274
               

               
Cow position:
               
chr24:43432625-43432888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
32, 110
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr24:18331557-18331820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
217, 63
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr24:33465775-33465522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 50
               

               
Conread position:
               
5-284
               

               
Cow position:
               
chr24:27290701-27290979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
33, 84
               

               
Conread position:
               
5-343
               

               
Cow position:
               
chr24:17832981-17832658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
32, 111
               

               
Conread position:
               
5-347
               

               
Cow position:
               
chr24:30235706-30236047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 51
               

               
Conread position:
               
5-355
               

               
Cow position:
               
chr24:30314199-30313846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 98
               

               
Conread position:
               
5-357
               

               
Cow position:
               
chr24:211818-212154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 142
               

               
Conread position:
               
5-360
               

               
Cow position:
               
chr24:352772-352415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
241, 115
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr24:18485164-18484803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 143
               

               
Conread position:
               
5-366
               

               
Cow position:
               
chr24:25194102-25194459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
90, 117
               

               
Conread position:
               
6-130
               

               
Cow position:
               
chr24:29540073-29539949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-188
               

               
Cow position:
               
chr24:27052661-27052481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
32, 13
               

               
Conread position:
               
6-289
               

               
Cow position:
               
chr24:14171860-14171583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
25, 109
               

               
Conread position:
               
6-350
               

               
Cow position:
               
chr24:37395374-37395028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
172, 29
               

               
Conread position:
               
6-352
               

               
Cow position:
               
chr24:27844686-27844354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 13
               

               
Conread position:
               
7-255
               

               
Cow position:
               
chr24:31324116-31324364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
52, 140
               

               
Conread position:
               
7-349
               

               
Cow position:
               
chr24:44987548-44987193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
29, 113
               

               
Conread position:
               
8-162
               

               
Cow position:
               
chr24:27941173-27941026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
8-197
               

               
Cow position:
               
chr24:39833676-39833493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
8-239
               

               
Cow position:
               
chr24:30897702-30897473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 108
               

               
Conread position:
               
8-251
               

               
Cow position:
               
chr24:201798-201561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
115, 59
               

               
Conread position:
               
8-320
               

               
Cow position:
               
chr24:28990400-28990707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 57
               

               
Conread position:
               
8-360
               

               
Cow position:
               
chr24:20801510-20801157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
31, 112
               

               
Conread position:
               
8-361
               

               
Cow position:
               
chr24:27149233-27149572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
40, 28
               

               
Conread position:
               
8-362
               

               
Cow position:
               
chr24:10299919-10300264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
122, 54
               

               
Conread position:
               
8-366
               

               
Cow position:
               
chr24:17752277-17751914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
106, 125
               

               
Conread position:
               
8-403
               

               
Cow position:
               
chr24:6450332-6450741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
29, 129
               

               
Conread position:
               
9-334
               

               
Cow position:
               
chr24:29586830-29587159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
28, 57
               

               
Conread position:
               
9-335
               

               
Cow position:
               
chr24:36173944-36173616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
24, 62
               

               
Conread position:
               
9-343
               

               
Cow position:
               
chr24:35073929-35074253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 106
               

               
Conread position:
               
12-264
               

               
Cow position:
               
chr24:26455679-26455931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 103
               

               
Conread position:
               
12-265
               

               
Cow position:
               
chr24:28319360-28319119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
121, 44
               

               
Conread position:
               
12-348
               

               
Cow position:
               
chr24:40300999-40301336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
236, 102
               

               
Conread position:
               
12-356
               

               
Cow position:
               
chr24:43371087-43371427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 106
               

               
Conread position:
               
13-348
               

               
Cow position:
               
chr24:19186802-19187108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
14-168
               

               
Cow position:
               
chr24:4615677-4615527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
14-284
               

               
Cow position:
               
chr24:34008736-34008465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
17, 134
               

               
Conread position:
               
16-279
               

               
Cow position:
               
chr24:11119128-11119380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
7, 99
               

               
Conread position:
               
16-318
               

               
Cow position:
               
chr24:20943011-20943303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
16-335
               

               
Cow position:
               
chr24:18741727-18741402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
18, 29
               

               
Conread position:
               
16-349
               

               
Cow position:
               
chr24:15057245-15057561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
16-357
               

               
Cow position:
               
chr24:27630247-27630584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
267, 100
               

               
Conread position:
               
16-358
               

               
Cow position:
               
chr24:18281791-18281448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
21, 106
               

               
Conread position:
               
16-358
               

               
Cow position:
               
chr24:32054503-32054830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
21, 98
               

               
Conread position:
               
16-364
               

               
Cow position:
               
chr24:26929101-26928750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
21, 98
               

               
Conread position:
               
18-266
               

               
Cow position:
               
chr24:2675168-2675401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
18-355
               

               
Cow position:
               
chr24:27726169-27725825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 129
               

               
Conread position:
               
19-265
               

               
Cow position:
               
chr24:43967654-43967413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
100, 117
               

               
Conread position:
               
19-345
               

               
Cow position:
               
chr24:25885314-25884975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
118, 129
               

               
Conread position:
               
19-365
               

               
Cow position:
               
chr24:17285147-17284791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
21-355
               

               
Cow position:
               
chr24:35675394-35675714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 73
               

               
Conread position:
               
24-320
               

               
Cow position:
               
chr24:16645471-16645173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
101, 126
               

               
Conread position:
               
25-346
               

               
Cow position:
               
chr24:39850031-39849718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
294, 32
               

               
Conread position:
               
29-268
               

               
Cow position:
               
chr24:24662272-24662039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
112, 30
               

               
Conread position:
               
29-277
               

               
Cow position:
               
chr24:8006168-8006407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
103, 65
               

               
Conread position:
               
30-263
               

               
Cow position:
               
chr24:29170828-29171048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
30-336
               

               
Cow position:
               
chr24:28233907-28234205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 64
               

               
Conread position:
               
32-352
               

               
Cow position:
               
chr24:10242921-10242605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
227, 54
               

               
Conread position:
               
41-348
               

               
Cow position:
               
chr24:29606174-29605857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
62, 114
               

               
Conread position:
               
46-268
               

               
Cow position:
               
chr24:32095194-32095401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
195, 31
               

               
Conread position:
               
52-284
               

               
Cow position:
               
chr24:39791419-39791650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 95
               

               
Conread position:
               
55-359
               

               
Cow position:
               
chr24:230159-230466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 92
               

               
Conread position:
               
58-336
               

               
Cow position:
               
chr24:29561688-29561415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 28
               

               
Conread position:
               
59-281
               

               
Cow position:
               
chr24:14457835-14457619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
59-283
               

               
Cow position:
               
chr24:35150409-35150625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
54, 63
               

               
Conread position:
               
59-332
               

               
Cow position:
               
chr24:35631874-35632141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
141, 54
               

               
Conread position:
               
59-337
               

               
Cow position:
               
chr24:43832410-43832687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
76, 94
               

               
Conread position:
               
59-347
               

               
Cow position:
               
chr24:32739382-32739088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 20
               

               
Conread position:
               
59-347
               

               
Cow position:
               
chr24:39523560-39523275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
262, 55
               

               
Conread position:
               
59-358
               

               
Cow position:
               
chr24:41405785-41406080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
109, 5
               

               
Conread position:
               
59-361
               

               
Cow position:
               
chr24:13626172-13626475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
211, 38
               

               
Conread position:
               
59-362
               

               
Cow position:
               
chr24:11840076-11840374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
261, 56
               

               
Conread position:
               
59-367
               

               
Cow position:
               
chr24:37975094-37974789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 29
               

               
Conread position:
               
60-371
               

               
Cow position:
               
chr24:20225634-20225940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
169, 26
               

               
Conread position:
               
63-348
               

               
Cow position:
               
chr24:40537441-40537156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
47, 40
               

               
Conread position:
               
64-331
               

               
Cow position:
               
chr24:42004062-42004328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
51, 84
               

               
Conread position:
               
69-255
               

               
Cow position:
               
chr24:30308660-30308478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
54, 80
               

               
Conread position:
               
69-340
               

               
Cow position:
               
chr24:28342247-28342528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
22, 82
               

               
Conread position:
               
69-343
               

               
Cow position:
               
chr24:27713510-27713239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 80
               

               
Conread position:
               
70-268
               

               
Cow position:
               
chr24:34496016-34496216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
67, 46
               

               
Conread position:
               
73-282
               

               
Cow position:
               
chr24:28042873-28043081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
57, 77
               

               
Conread position:
               
74-348
               

               
Cow position:
               
chr24:43536854-43537135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
181, 65
               

               
Conread position:
               
75-360
               

               
Cow position:
               
chr24:39911134-39910842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
31, 73
               

               
Conread position:
               
76-350
               

               
Cow position:
               
chr24:20807439-20807701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
240, 52
               

               
Conread position:
               
76-362
               

               
Cow position:
               
chr24:37823432-37823717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 39
               

               
Conread position:
               
77-270
               

               
Cow position:
               
chr24:4710341-4710150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
77-294
               

               
Cow position:
               
chr24:7046843-7046631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
177, 38
               

               
Conread position:
               
77-360
               

               
Cow position:
               
chr24:18755661-18755947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
77, 20
               

               
Conread position:
               
78-350
               

               
Cow position:
               
chr24:13948027-13948300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 50
               

               
Conread position:
               
78-357
               

               
Cow position:
               
chr24:15288726-15289011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 76
               

               
Conread position:
               
79-348
               

               
Cow position:
               
chr24:20364503-20364240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 18
               

               
Conread position:
               
80-272
               

               
Cow position:
               
chr24:116647-116459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
50, 44
               

               
Conread position:
               
80-346
               

               
Cow position:
               
chr24:44869915-44870169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
52, 23
               

               
Conread position:
               
81-337
               

               
Cow position:
               
chr24:25122262-25122502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
238, 29
               

               
Conread position:
               
81-371
               

               
Cow position:
               
chr24:27349271-27348976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 72
               

               
Conread position:
               
83-360
               

               
Cow position:
               
chr24:175586-175320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
44, 69
               

               
Conread position:
               
87-348
               

               
Cow position:
               
chr24:2992963-2992704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
184, 29
               

               
Conread position:
               
87-348
               

               
Cow position:
               
chr24:27284735-27285000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 40
               

               
Conread position:
               
88-360
               

               
Cow position:
               
chr24:43598957-43598692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
90, 36
               

               
Conread position:
               
90-238
               

               
Cow position:
               
chr24:44145497-44145641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 31
               

               
Conread position:
               
101-332
               

               
Cow position:
               
chr24:41916183-41916417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
68, 20
               

               
Conread position:
               
105-350
               

               
Cow position:
               
chr24:8676755-8677004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
166, 16
               

               
Conread position:
               
112-345
               

               
Cow position:
               
chr24:5360657-5360884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
207, 35
               

               
Conread position:
               
112-356
               

               
Cow position:
               
chr24:33244333-33244570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
17, 37
               

               
Conread position:
               
112-367
               

               
Cow position:
               
chr24:2379890-2380149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
148, 37
               

               
Conread position:
               
113-358
               

               
Cow position:
               
chr24:42984335-42984581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
157, 15
               

               
Conread position:
               
115-360
               

               
Cow position:
               
chr24:38478454-38478209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 125
               

               
Conread position:
               
116-354
               

               
Cow position:
               
chr24:21835016-21834781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
205, 10
               

               
Conread position:
               
116-360
               

               
Cow position:
               
chr24:26001329-26001575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
165, 31
               

               
Conread position:
               
116-361
               

               
Cow position:
               
chr24:42175472-42175714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
116-379
               

               
Cow position:
               
chr24:23667176-23666920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
132, 31
               

               
Conread position:
               
118-350
               

               
Cow position:
               
chr24:27740139-27740355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
119-260
               

               
Cow position:
               
chr24:40983076-40983215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
119-332
               

               
Cow position:
               
chr24:12077534-12077757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
5, 31
               

               
Conread position:
               
120-347
               

               
Cow position:
               
chr24:22133117-22133341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
200, 27
               

               
Conread position:
               
121-352
               

               
Cow position:
               
chr24:37651671-37651901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
9, 29
               

               
Conread position:
               
122-361
               

               
Cow position:
               
chr24:29985037-29984802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
122-361
               

               
Cow position:
               
chr24:43220125-43219889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
159, 36
               

               
Conread position:
               
127-279
               

               
Cow position:
               
chr24:17375591-17375742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
144, 20
               

               
Conread position:
               
127-335
               

               
Cow position:
               
chr24:28344338-28344543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
127-350
               

               
Cow position:
               
chr24:39238724-39238939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
184, 20
               

               
Conread position:
               
127-360
               

               
Cow position:
               
chr24:28510750-28510978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
190, 20
               

               
Conread position:
               
128-276
               

               
Cow position:
               
chr24:42981805-42981662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
129-342
               

               
Cow position:
               
chr24:29539973-29539760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
188, 15
               

               
Conread position:
               
131-350
               

               
Cow position:
               
chr24:42687805-42688020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
188, 16
               

               
Conread position:
               
135-352
               

               
Cow position:
               
chr24:42226234-42226444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
138-336
               

               
Cow position:
               
chr24:32891080-32890884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
188, 8
               

               
Conread position:
               
141-348
               

               
Cow position:
               
chr24:7757739-7757945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
178, 8
               

               
Conread position:
               
145-358
               

               
Cow position:
               
chr24:18302683-18302902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
6, 45
               

               
Conread position:
               
149-361
               

               
Cow position:
               
chr24:3412657-3412870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
166, 110
               

               
Conread position:
               
150-345
               

               
Cow position:
               
chr24:13610286-13610474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
93, 35
               

               
Conread position:
               
151-352
               

               
Cow position:
               
chr24:27810134-27810330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
169, 30
               

               
Conread position:
               
153-350
               

               
Cow position:
               
chr24:6886989-6887185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
166, 37
               

               
Conread position:
               
154-284
               

               
Cow position:
               
chr24:35030082-35029953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
154-361
               

               
Cow position:
               
chr24:36775798-36775581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
113, 41
               

               
Conread position:
               
156-352
               

               
Cow position:
               
chr24:39904023-39903828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
163, 58
               

               
Conread position:
               
156-361
               

               
Cow position:
               
chr24:161984-162190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
113, 82
               

               
Conread position:
               
157-361
               

               
Cow position:
               
chr24:43499640-43499846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
89, 126
               

               
Conread position:
               
157-362
               

               
Cow position:
               
chr24:25142591-25142807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
159-359
               

               
Cow position:
               
chr24:17689627-17689422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
102, 81
               

               
Conread position:
               
160-348
               

               
Cow position:
               
chr24:358351-358546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
105, 40
               

               
Conread position:
               
161-364
               

               
Cow position:
               
chr24:27940635-27940436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
77, 39
               

               
Conread position:
               
162-359
               

               
Cow position:
               
chr24:18874834-18874635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
108, 78
               

               
Conread position:
               
167-359
               

               
Cow position:
               
chr24:10219393-10219199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
152, 80
               

               
Conread position:
               
167-361
               

               
Cow position:
               
chr24:36286561-36286758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
152, 102
               

               
Conread position:
               
168-360
               

               
Cow position:
               
chr24:20017435-20017238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
101, 70
               

               
Conread position:
               
172-347
               

               
Cow position:
               
chr24:40811676-40811843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
173-361
               

               
Cow position:
               
chr24:22419958-22420154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
97, 68
               

               
Conread position:
               
176-370
               

               
Cow position:
               
chr24:30325783-30325584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
43, 85
               

               
Conread position:
               
178-359
               

               
Cow position:
               
chr24:31781873-31782063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
179-361
               

               
Cow position:
               
chr24:24091336-24091146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 175
               

               
Conread position:
               
180-335
               

               
Cow position:
               
chr24:43358703-43358858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
137, 99
               

               
Conread position:
               
180-362
               

               
Cow position:
               
chr24:25947857-25947669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
103, 61
               

               
Conread position:
               
183-348
               

               
Cow position:
               
chr24:28256051-28255887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
134, 64
               

               
Conread position:
               
183-349
               

               
Cow position:
               
chr24:7275711-7275875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
129, 44
               

               
Conread position:
               
183-359
               

               
Cow position:
               
chr24:42146218-42146392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
148, 53
               

               
Conread position:
               
184-332
               

               
Cow position:
               
chr24:17073249-17073105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
135, 63
               

               
Conread position:
               
184-359
               

               
Cow position:
               
chr24:22129629-22129457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
184-365
               

               
Cow position:
               
chr24:21656415-21656602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
52, 162
               

               
Conread position:
               
194-342
               

               
Cow position:
               
chr24:24540472-24540322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
122, 53
               

               
Conread position:
               
200-362
               

               
Cow position:
               
chr24:3056956-3057117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
117, 47
               

               
Conread position:
               
202-362
               

               
Cow position:
               
chr24:6488235-6488393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
117, 56
               

               
Conread position:
               
209-361
               

               
Cow position:
               
chr24:41925856-41926003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
217-348
               

               
Cow position:
               
chr24:28645828-28645699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
5, 32
               
Show alignments to all cow chromosomes.