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Cow genome map

           
Conread name:
           
Ova1-OVRM10125H10
        

               
Conread position:
               
1-174
               

               
Cow position:
               
chr25:20211227-20211059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr25:35333009-35333177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 114
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr25:38972687-38972856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr25:12239297-12239110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
55, 119
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr25:4681088-4681310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr25:15377179-15377411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
129, 54
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr25:36036929-36036670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 86
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr25:6961302-6961040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 21
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr25:14196711-14196982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
152, 107
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr25:15254480-15254225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr25:26238722-26238993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
177, 92
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr25:788116-788424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr25:15714736-15715041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr25:3992645-3992972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 56
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr25:6683210-6682858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 16
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr25:7007766-7008115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 55
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr25:7306153-7306488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
170, 114
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr25:21668097-21668446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 127
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr25:30852608-30852963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
95, 55
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr25:33550360-33550710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 48
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr25:41151109-41150766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 72
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr25:19129704-19130054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 116
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr25:8120631-8120983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 95
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr25:19679197-19679554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 51
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr25:22315054-22315407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 64
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr25:9990241-9989896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 55
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr25:21193089-21192736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 155
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr25:36081728-36082078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 113
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr25:4521983-4521633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 53
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr25:20785733-20785375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 24
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr25:26338301-26338671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
31, 148
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr25:26679079-26679439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 118
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr25:35347759-35348118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 111
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr25:26089963-26089613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 78
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr25:12778677-12778346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr25:26523816-26524182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
247, 87
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr25:30319598-30319221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 119
               

               
Conread position:
               
2-272
               

               
Cow position:
               
chr25:21209092-21208855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
2-362
               

               
Cow position:
               
chr25:10407562-10407199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
31, 73
               

               
Conread position:
               
3-187
               

               
Cow position:
               
chr25:36779349-36779535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 147
               

               
Conread position:
               
3-268
               

               
Cow position:
               
chr25:32191524-32191770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
251, 67
               

               
Conread position:
               
3-276
               

               
Cow position:
               
chr25:22531140-22531403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
129, 16
               

               
Conread position:
               
3-331
               

               
Cow position:
               
chr25:23829266-23828949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 36
               

               
Conread position:
               
3-335
               

               
Cow position:
               
chr25:20023536-20023209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 145
               

               
Conread position:
               
3-346
               

               
Cow position:
               
chr25:22297165-22296817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
131, 105
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr25:38135600-38135951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
46, 66
               

               
Conread position:
               
3-361
               

               
Cow position:
               
chr25:5920791-5921160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
33, 119
               

               
Conread position:
               
3-364
               

               
Cow position:
               
chr25:26133891-26134262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
29, 127
               

               
Conread position:
               
4-145
               

               
Cow position:
               
chr25:15694836-15694975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
4-165
               

               
Cow position:
               
chr25:11054759-11054916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
4-176
               

               
Cow position:
               
chr25:9642211-9642381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
4-219
               

               
Cow position:
               
chr25:12081468-12081256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 106
               

               
Conread position:
               
4-223
               

               
Cow position:
               
chr25:17144278-17144498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
51, 60
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr25:8961628-8961880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
109, 77
               

               
Conread position:
               
4-265
               

               
Cow position:
               
chr25:6687804-6688057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 23
               

               
Conread position:
               
4-268
               

               
Cow position:
               
chr25:20133458-20133201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr25:36017392-36017655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
110, 80
               

               
Conread position:
               
4-279
               

               
Cow position:
               
chr25:38569611-38569352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr25:22751155-22750878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
91, 117
               

               
Conread position:
               
4-285
               

               
Cow position:
               
chr25:18905739-18906016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
33, 111
               

               
Conread position:
               
4-285
               

               
Cow position:
               
chr25:21895032-21894757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
104, 123
               

               
Conread position:
               
4-320
               

               
Cow position:
               
chr25:22203831-22203530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 80
               

               
Conread position:
               
4-324
               

               
Cow position:
               
chr25:16867087-16867416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
102, 34
               

               
Conread position:
               
4-324
               

               
Cow position:
               
chr25:17566439-17566762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
32, 105
               

               
Conread position:
               
4-329
               

               
Cow position:
               
chr25:40321435-40321117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
103, 31
               

               
Conread position:
               
4-332
               

               
Cow position:
               
chr25:11661962-11661648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
4-337
               

               
Cow position:
               
chr25:7380986-7380651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
16, 73
               

               
Conread position:
               
4-341
               

               
Cow position:
               
chr25:2624663-2624985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 83
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr25:14512965-14513299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
86, 146
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr25:16319276-16318955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 40
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr25:17658467-17658807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
33, 53
               

               
Conread position:
               
4-347
               

               
Cow position:
               
chr25:14720609-14720929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 37
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr25:7216685-7217014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 65
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr25:11315764-11316100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
60, 38
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr25:26700891-26701218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
313, 45
               

               
Conread position:
               
4-351
               

               
Cow position:
               
chr25:30618920-30619270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
262, 31
               

               
Conread position:
               
4-352
               

               
Cow position:
               
chr25:24207564-24207210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
119, 37
               

               
Conread position:
               
4-354
               

               
Cow position:
               
chr25:21893192-21893537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
4-359
               

               
Cow position:
               
chr25:12755638-12755281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
33, 146
               

               
Conread position:
               
4-359
               

               
Cow position:
               
chr25:21191345-21191686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 50
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr25:1838091-1838458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
38, 105
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr25:2414673-2415007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
316, 68
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr25:14791608-14791965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 142
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr25:26087373-26087733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
34, 98
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr25:30279349-30278986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 16
               

               
Conread position:
               
4-364
               

               
Cow position:
               
chr25:12609199-12609556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 71
               

               
Conread position:
               
4-364
               

               
Cow position:
               
chr25:40904975-40904615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
50, 100
               

               
Conread position:
               
4-367
               

               
Cow position:
               
chr25:11585376-11585746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
245, 34
               

               
Conread position:
               
4-368
               

               
Cow position:
               
chr25:36746588-36746229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 52
               

               
Conread position:
               
5-164
               

               
Cow position:
               
chr25:16001669-16001514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
5-172
               

               
Cow position:
               
chr25:36033293-36033457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
5-235
               

               
Cow position:
               
chr25:6886120-6885889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 123
               

               
Conread position:
               
5-252
               

               
Cow position:
               
chr25:17975512-17975279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
5-274
               

               
Cow position:
               
chr25:4547861-4547596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr25:34169809-34170068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
109, 51
               

               
Conread position:
               
5-289
               

               
Cow position:
               
chr25:12117133-12116862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
125, 69
               

               
Conread position:
               
5-343
               

               
Cow position:
               
chr25:10156444-10156746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
217, 34
               

               
Conread position:
               
5-348
               

               
Cow position:
               
chr25:18721260-18720930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 52
               

               
Conread position:
               
5-348
               

               
Cow position:
               
chr25:20007990-20008333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
167, 87
               

               
Conread position:
               
5-356
               

               
Cow position:
               
chr25:13272428-13272776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 42
               

               
Conread position:
               
5-360
               

               
Cow position:
               
chr25:14833803-14833458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
194, 86
               

               
Conread position:
               
5-364
               

               
Cow position:
               
chr25:7750311-7750661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 51
               

               
Conread position:
               
5-364
               

               
Cow position:
               
chr25:20069579-20069929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
87, 80
               

               
Conread position:
               
5-366
               

               
Cow position:
               
chr25:22178776-22179128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 86
               

               
Conread position:
               
6-222
               

               
Cow position:
               
chr25:16714419-16714200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
31, 92
               

               
Conread position:
               
6-281
               

               
Cow position:
               
chr25:10218194-10217924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 117
               

               
Conread position:
               
6-283
               

               
Cow position:
               
chr25:38981959-38982222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
6-295
               

               
Cow position:
               
chr25:28188092-28187804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
26, 136
               

               
Conread position:
               
6-332
               

               
Cow position:
               
chr25:23245153-23244822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 116
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr25:24651595-24651270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 110
               

               
Conread position:
               
6-348
               

               
Cow position:
               
chr25:12899614-12899964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
108, 17
               

               
Conread position:
               
6-363
               

               
Cow position:
               
chr25:16921934-16921580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
275, 53
               

               
Conread position:
               
7-201
               

               
Cow position:
               
chr25:9957183-9956990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 108
               

               
Conread position:
               
7-265
               

               
Cow position:
               
chr25:25051524-25051264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
44, 109
               

               
Conread position:
               
7-360
               

               
Cow position:
               
chr25:5846946-5846594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
276, 31
               

               
Conread position:
               
7-360
               

               
Cow position:
               
chr25:7641593-7641247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 49
               

               
Conread position:
               
8-238
               

               
Cow position:
               
chr25:12319489-12319267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
104, 141
               

               
Conread position:
               
8-335
               

               
Cow position:
               
chr25:13443551-13443222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
98, 27
               

               
Conread position:
               
8-337
               

               
Cow position:
               
chr25:10504479-10504148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
267, 79
               

               
Conread position:
               
8-348
               

               
Cow position:
               
chr25:24669578-24669254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 100
               

               
Conread position:
               
8-351
               

               
Cow position:
               
chr25:26654767-26655093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
29, 107
               

               
Conread position:
               
8-367
               

               
Cow position:
               
chr25:22730691-22731042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
23, 49
               

               
Conread position:
               
9-215
               

               
Cow position:
               
chr25:16570474-16570664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
9-273
               

               
Cow position:
               
chr25:27531413-27531152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
153, 56
               

               
Conread position:
               
9-305
               

               
Cow position:
               
chr25:34979008-34978716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
105, 66
               

               
Conread position:
               
10-348
               

               
Cow position:
               
chr25:26136963-26136622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
24, 102
               

               
Conread position:
               
12-207
               

               
Cow position:
               
chr25:5837100-5836903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
129, 42
               

               
Conread position:
               
12-273
               

               
Cow position:
               
chr25:13569311-13569057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 105
               

               
Conread position:
               
12-360
               

               
Cow position:
               
chr25:27801151-27801488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
227, 17
               

               
Conread position:
               
13-375
               

               
Cow position:
               
chr25:20523367-20523013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 61
               

               
Conread position:
               
14-192
               

               
Cow position:
               
chr25:5341517-5341692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
118, 102
               

               
Conread position:
               
14-221
               

               
Cow position:
               
chr25:24051827-24052034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
97, 72
               

               
Conread position:
               
14-238
               

               
Cow position:
               
chr25:18266024-18266249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
115, 136
               

               
Conread position:
               
15-328
               

               
Cow position:
               
chr25:15634611-15634291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 118
               

               
Conread position:
               
15-356
               

               
Cow position:
               
chr25:4245555-4245870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
307, 41
               

               
Conread position:
               
15-358
               

               
Cow position:
               
chr25:22756474-22756817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
17, 107
               

               
Conread position:
               
15-364
               

               
Cow position:
               
chr25:11436941-11436613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 29
               

               
Conread position:
               
15-367
               

               
Cow position:
               
chr25:12510144-12509804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 44
               

               
Conread position:
               
16-336
               

               
Cow position:
               
chr25:36835558-36835246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
16-348
               

               
Cow position:
               
chr25:23053425-23053761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 82
               

               
Conread position:
               
16-370
               

               
Cow position:
               
chr25:448301-447942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
16, 103
               

               
Conread position:
               
17-332
               

               
Cow position:
               
chr25:23779458-23779151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 74
               

               
Conread position:
               
17-350
               

               
Cow position:
               
chr25:8157643-8157315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
71, 135
               

               
Conread position:
               
19-212
               

               
Cow position:
               
chr25:7449677-7449859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
19-233
               

               
Cow position:
               
chr25:20076362-20076577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
117, 96
               

               
Conread position:
               
19-268
               

               
Cow position:
               
chr25:14157491-14157740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 27
               

               
Conread position:
               
19-371
               

               
Cow position:
               
chr25:24572938-24573279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
20-343
               

               
Cow position:
               
chr25:11051400-11051715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 31
               

               
Conread position:
               
21-361
               

               
Cow position:
               
chr25:22346644-22346993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
11, 134
               

               
Conread position:
               
22-335
               

               
Cow position:
               
chr25:17190868-17190569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
65, 26
               

               
Conread position:
               
22-356
               

               
Cow position:
               
chr25:18202054-18201722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
14, 104
               

               
Conread position:
               
22-361
               

               
Cow position:
               
chr25:6470346-6469993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
10, 226
               

               
Conread position:
               
23-347
               

               
Cow position:
               
chr25:4488793-4489100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
299, 60
               

               
Conread position:
               
24-361
               

               
Cow position:
               
chr25:33457604-33457935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 70
               

               
Conread position:
               
25-361
               

               
Cow position:
               
chr25:9843052-9843393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 5
               

               
Conread position:
               
29-213
               

               
Cow position:
               
chr25:26642462-26642647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
21, 88
               

               
Conread position:
               
29-348
               

               
Cow position:
               
chr25:33557153-33557464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
77, 98
               

               
Conread position:
               
30-324
               

               
Cow position:
               
chr25:36872242-36872534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 83
               

               
Conread position:
               
30-335
               

               
Cow position:
               
chr25:19364181-19363875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 95
               

               
Conread position:
               
31-336
               

               
Cow position:
               
chr25:11433072-11432766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 124
               

               
Conread position:
               
31-387
               

               
Cow position:
               
chr25:17119626-17119982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
254, 66
               

               
Conread position:
               
33-245
               

               
Cow position:
               
chr25:14117976-14118183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
34-201
               

               
Cow position:
               
chr25:13139704-13139872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 86
               

               
Conread position:
               
47-283
               

               
Cow position:
               
chr25:10949687-10949448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
29, 103
               

               
Conread position:
               
51-225
               

               
Cow position:
               
chr25:599203-599374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
52-276
               

               
Cow position:
               
chr25:13566864-13567089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
78, 195
               

               
Conread position:
               
57-273
               

               
Cow position:
               
chr25:22341434-22341647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
190, 17
               

               
Conread position:
               
59-225
               

               
Cow position:
               
chr25:19317170-19317337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
54, 91
               

               
Conread position:
               
59-273
               

               
Cow position:
               
chr25:4947872-4948081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
59-320
               

               
Cow position:
               
chr25:17342365-17342628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
53, 68
               

               
Conread position:
               
59-348
               

               
Cow position:
               
chr25:17474604-17474316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
221, 63
               

               
Conread position:
               
59-361
               

               
Cow position:
               
chr25:25716562-25716856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
206, 27
               

               
Conread position:
               
59-364
               

               
Cow position:
               
chr25:36555780-36555486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
55, 66
               

               
Conread position:
               
59-370
               

               
Cow position:
               
chr25:26225116-26224816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
263, 56
               

               
Conread position:
               
61-348
               

               
Cow position:
               
chr25:11956718-11957002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
205, 16
               

               
Conread position:
               
62-359
               

               
Cow position:
               
chr25:13767881-13768168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 53
               

               
Conread position:
               
63-283
               

               
Cow position:
               
chr25:26051814-26052032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
52, 64
               

               
Conread position:
               
63-340
               

               
Cow position:
               
chr25:7799466-7799740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 51
               

               
Conread position:
               
63-345
               

               
Cow position:
               
chr25:6928595-6928321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 56
               

               
Conread position:
               
63-347
               

               
Cow position:
               
chr25:6292481-6292766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
163, 52
               

               
Conread position:
               
63-349
               

               
Cow position:
               
chr25:12305189-12305478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
196, 63
               

               
Conread position:
               
63-359
               

               
Cow position:
               
chr25:20143633-20143342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 63
               

               
Conread position:
               
64-356
               

               
Cow position:
               
chr25:12806958-12807247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
205, 58
               

               
Conread position:
               
64-360
               

               
Cow position:
               
chr25:7023080-7023396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
176, 83
               

               
Conread position:
               
64-364
               

               
Cow position:
               
chr25:13621445-13621149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 83
               

               
Conread position:
               
65-238
               

               
Cow position:
               
chr25:9349365-9349199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
106, 49
               

               
Conread position:
               
65-359
               

               
Cow position:
               
chr25:37332130-37331838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
44, 89
               

               
Conread position:
               
65-361
               

               
Cow position:
               
chr25:7673205-7673512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 65
               

               
Conread position:
               
65-361
               

               
Cow position:
               
chr25:33663992-33663694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
72, 56
               

               
Conread position:
               
65-362
               

               
Cow position:
               
chr25:5834337-5834032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
88, 49
               

               
Conread position:
               
66-190
               

               
Cow position:
               
chr25:7440942-7441066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
28, 82
               

               
Conread position:
               
66-360
               

               
Cow position:
               
chr25:1763006-1763292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
253, 49
               

               
Conread position:
               
67-347
               

               
Cow position:
               
chr25:433132-432851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
71, 53
               

               
Conread position:
               
69-276
               

               
Cow position:
               
chr25:40931194-40931395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 31
               

               
Conread position:
               
73-251
               

               
Cow position:
               
chr25:14809203-14809371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
73-284
               

               
Cow position:
               
chr25:23504970-23505182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
35, 77
               

               
Conread position:
               
73-344
               

               
Cow position:
               
chr25:11823509-11823250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
243, 76
               

               
Conread position:
               
74-188
               

               
Cow position:
               
chr25:14266596-14266483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
58, 52
               

               
Conread position:
               
74-264
               

               
Cow position:
               
chr25:6134169-6133980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 76
               

               
Conread position:
               
75-276
               

               
Cow position:
               
chr25:35826363-35826159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 73
               

               
Conread position:
               
76-239
               

               
Cow position:
               
chr25:6226962-6227121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
76-343
               

               
Cow position:
               
chr25:11276478-11276740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
171, 48
               

               
Conread position:
               
79-348
               

               
Cow position:
               
chr25:19478602-19478888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
169, 70
               

               
Conread position:
               
79-364
               

               
Cow position:
               
chr25:15273604-15273877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
235, 9
               

               
Conread position:
               
80-337
               

               
Cow position:
               
chr25:26306276-26306016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 67
               

               
Conread position:
               
81-359
               

               
Cow position:
               
chr25:36074069-36073795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
42, 70
               

               
Conread position:
               
86-255
               

               
Cow position:
               
chr25:36019732-36019567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
86-348
               

               
Cow position:
               
chr25:1840257-1840519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 62
               

               
Conread position:
               
90-360
               

               
Cow position:
               
chr25:7551421-7551159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
229, 59
               

               
Conread position:
               
92-361
               

               
Cow position:
               
chr25:35762532-35762799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
122, 32
               

               
Conread position:
               
96-361
               

               
Cow position:
               
chr25:27595510-27595771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
98-350
               

               
Cow position:
               
chr25:40682686-40682937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
150, 9
               

               
Conread position:
               
101-348
               

               
Cow position:
               
chr25:22298585-22298830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
31, 46
               

               
Conread position:
               
106-352
               

               
Cow position:
               
chr25:18810297-18810534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
211, 43
               

               
Conread position:
               
108-331
               

               
Cow position:
               
chr25:35339232-35339009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
98, 8
               

               
Conread position:
               
108-361
               

               
Cow position:
               
chr25:22348508-22348246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
22, 39
               

               
Conread position:
               
108-379
               

               
Cow position:
               
chr25:28597655-28597374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
70, 8
               

               
Conread position:
               
109-361
               

               
Cow position:
               
chr25:18760749-18760500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
208, 17
               

               
Conread position:
               
111-284
               

               
Cow position:
               
chr25:19421783-19421959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
78, 37
               

               
Conread position:
               
114-336
               

               
Cow position:
               
chr25:26072597-26072377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
7, 35
               

               
Conread position:
               
115-330
               

               
Cow position:
               
chr25:9107561-9107353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
115-343
               

               
Cow position:
               
chr25:18288806-18288577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
115-364
               

               
Cow position:
               
chr25:3346232-3345987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
14, 35
               

               
Conread position:
               
116-348
               

               
Cow position:
               
chr25:13826400-13826629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
203, 19
               

               
Conread position:
               
116-356
               

               
Cow position:
               
chr25:18929229-18929001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
116-361
               

               
Cow position:
               
chr25:9025084-9025333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
32, 95
               

               
Conread position:
               
117-356
               

               
Cow position:
               
chr25:12195259-12195014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
121, 9
               

               
Conread position:
               
121-361
               

               
Cow position:
               
chr25:13222869-13223106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
198, 26
               

               
Conread position:
               
125-335
               

               
Cow position:
               
chr25:36873360-36873152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 22
               

               
Conread position:
               
126-276
               

               
Cow position:
               
chr25:30625110-30624961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
126-303
               

               
Cow position:
               
chr25:15463561-15463737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
144, 21
               

               
Conread position:
               
127-335
               

               
Cow position:
               
chr25:20461082-20461301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
112, 20
               

               
Conread position:
               
127-364
               

               
Cow position:
               
chr25:5637410-5637176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
127-372
               

               
Cow position:
               
chr25:13823744-13823496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
130, 19
               

               
Conread position:
               
128-359
               

               
Cow position:
               
chr25:23473416-23473644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
143, 19
               

               
Conread position:
               
131-337
               

               
Cow position:
               
chr25:16372530-16372740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
38, 20
               

               
Conread position:
               
131-347
               

               
Cow position:
               
chr25:2111028-2111233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
188, 16
               

               
Conread position:
               
132-239
               

               
Cow position:
               
chr25:14211609-14211715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
133-349
               

               
Cow position:
               
chr25:23520047-23519838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
135-347
               

               
Cow position:
               
chr25:3744762-3744537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
111, 12
               

               
Conread position:
               
135-359
               

               
Cow position:
               
chr25:28668068-28667842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
138-295
               

               
Cow position:
               
chr25:30064927-30064768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
100, 9
               

               
Conread position:
               
139-348
               

               
Cow position:
               
chr25:9574143-9573937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
180, 7
               

               
Conread position:
               
140-348
               

               
Cow position:
               
chr25:2361825-2362023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
177, 7
               

               
Conread position:
               
140-348
               

               
Cow position:
               
chr25:20202901-20203106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
179, 7
               

               
Conread position:
               
143-361
               

               
Cow position:
               
chr25:14419691-14419907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
56, 77
               

               
Conread position:
               
146-275
               

               
Cow position:
               
chr25:34967516-34967388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
149-343
               

               
Cow position:
               
chr25:11760454-11760267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
168, 45
               

               
Conread position:
               
149-346
               

               
Cow position:
               
chr25:23998928-23998743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
168, 98
               

               
Conread position:
               
149-346
               

               
Cow position:
               
chr25:31657281-31657084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
170, 98
               

               
Conread position:
               
149-355
               

               
Cow position:
               
chr25:11841293-11841504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
99, 50
               

               
Conread position:
               
150-361
               

               
Cow position:
               
chr25:8347649-8347868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
134, 88
               

               
Conread position:
               
153-353
               

               
Cow position:
               
chr25:1802607-1802814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
16, 80
               

               
Conread position:
               
155-353
               

               
Cow position:
               
chr25:18551332-18551130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
131, 72
               

               
Conread position:
               
156-346
               

               
Cow position:
               
chr25:11060135-11060331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
156-348
               

               
Cow position:
               
chr25:28945023-28945214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 70
               

               
Conread position:
               
156-364
               

               
Cow position:
               
chr25:15573391-15573591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
116, 91
               

               
Conread position:
               
157-348
               

               
Cow position:
               
chr25:35902751-35902944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
86, 104
               

               
Conread position:
               
157-356
               

               
Cow position:
               
chr25:24115312-24115108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
113, 90
               

               
Conread position:
               
160-347
               

               
Cow position:
               
chr25:33100580-33100769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
161-353
               

               
Cow position:
               
chr25:15349897-15349706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
158, 46
               

               
Conread position:
               
162-361
               

               
Cow position:
               
chr25:21287517-21287322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
142, 57
               

               
Conread position:
               
162-364
               

               
Cow position:
               
chr25:22565947-22565754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
163-351
               

               
Cow position:
               
chr25:22734018-22734207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
156, 55
               

               
Conread position:
               
164-358
               

               
Cow position:
               
chr25:14209996-14210183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
155, 8
               

               
Conread position:
               
164-361
               

               
Cow position:
               
chr25:7684887-7684687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
110, 45
               

               
Conread position:
               
165-348
               

               
Cow position:
               
chr25:31926365-31926186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
83, 115
               

               
Conread position:
               
167-361
               

               
Cow position:
               
chr25:22373476-22373275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
114, 74
               

               
Conread position:
               
169-354
               

               
Cow position:
               
chr25:18934618-18934432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
146, 7
               

               
Conread position:
               
171-361
               

               
Cow position:
               
chr25:20085595-20085788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
95, 70
               

               
Conread position:
               
172-352
               

               
Cow position:
               
chr25:24147927-24147754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
147, 57
               

               
Conread position:
               
174-352
               

               
Cow position:
               
chr25:27594352-27594526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
177-348
               

               
Cow position:
               
chr25:4157222-4157049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
142, 70
               

               
Conread position:
               
179-342
               

               
Cow position:
               
chr25:10856688-10856524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
133, 68
               

               
Conread position:
               
180-350
               

               
Cow position:
               
chr25:12223598-12223764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
139, 58
               

               
Conread position:
               
183-316
               

               
Cow position:
               
chr25:6781892-6782023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
187-348
               

               
Cow position:
               
chr25:1509932-1509765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
92, 78
               

               
Conread position:
               
194-361
               

               
Cow position:
               
chr25:21082366-21082192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
93, 54
               

               
Conread position:
               
195-367
               

               
Cow position:
               
chr25:17141143-17141324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
196-352
               

               
Cow position:
               
chr25:13565280-13565132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
123, 14
               

               
Conread position:
               
201-361
               

               
Cow position:
               
chr25:18865868-18866019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
201-368
               

               
Cow position:
               
chr25:30709300-30709127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 46
               

               
Conread position:
               
203-361
               

               
Cow position:
               
chr25:7864380-7864542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
12, 58
               

               
Conread position:
               
209-346
               

               
Cow position:
               
chr25:13470658-13470515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
77, 39
               

               
Conread position:
               
209-379
               

               
Cow position:
               
chr25:7441065-7441238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 50
               

               
Conread position:
               
227-346
               

               
Cow position:
               
chr25:22439428-22439307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
95, 31
               

               
Conread position:
               
227-367
               

               
Cow position:
               
chr25:6940415-6940272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
92, 44
               
Show alignments to all cow chromosomes.