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Cow genome map

           
Conread name:
           
Ova1-OVRM10125H10
        

               
Conread position:
               
1-116
               

               
Cow position:
               
chr4:61391358-61391243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
108, 96
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr4:27292110-27291942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr4:33357780-33357949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
113, 124
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr4:2422431-2422599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr4:3689554-3689743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
131, 55
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr4:20299120-20299320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr4:19497406-19497209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
208, 67
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr4:27540467-27540680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
153, 55
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr4:8947239-8947459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
123, 84
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr4:14470724-14470506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr4:24744563-24744340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
93, 147
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr4:33612513-33612293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr4:46552474-46552265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr4:11331938-11332174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
169, 113
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr4:66112227-66111994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
125, 115
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr4:21233028-21232795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 116
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr4:16602207-16601982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr4:620304-620053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
76, 122
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr4:47348673-47348923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr4:25984072-25984325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
216, 58
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr4:63459366-63459117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
78, 107
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr4:24002120-24001859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 17
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr4:34337421-34337162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
114, 63
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr4:9815502-9815230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr4:45367579-45367856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
36, 150
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr4:19322237-19321951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
31, 117
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr4:48961634-48961358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
131, 77
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr4:63096227-63095942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 33
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr4:20842770-20843056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
203, 45
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr4:7808432-7808713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
247, 50
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr4:36893203-36893521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
236, 146
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr4:13327108-13326776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 147
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr4:66172952-66172619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 64
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr4:46550234-46550568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 55
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr4:54479058-54478735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
267, 62
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr4:19501238-19500907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 48
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr4:40414782-40414441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 58
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr4:3421473-3421811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 79
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr4:21531798-21531449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 84
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr4:20147032-20147376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 28
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr4:28772221-28771879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 18
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr4:51727922-51728265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 115
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr4:275309-275636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
320, 105
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr4:19597470-19597140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 93
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr4:26659150-26659492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 95
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr4:31136597-31136947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 149
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr4:48152518-48152179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 33
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr4:62983704-62983366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
247, 56
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr4:48485850-48486189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 55
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr4:12049091-12049418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 112
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr4:4185970-4186312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
46, 83
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr4:38935202-38935556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 147
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr4:51851047-51851408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 94
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr4:65919459-65919813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 113
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr4:61897690-61897349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 112
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr4:4319299-4318948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 17
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr4:10915991-10915629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 55
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr4:17774508-17774161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 128
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr4:21391967-21391612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 146
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr4:35981839-35982202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 147
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr4:38944415-38944053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 130
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr4:59277630-59277267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 82
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr4:37691467-37691107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
57, 38
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr4:19435106-19435453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 8
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr4:20327864-20327518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 45
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr4:7430169-7430508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 85
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr4:33097130-33096774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
332, 102
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr4:52748612-52748245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 148
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr4:28839471-28839827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 112
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr4:39128380-39128654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
29, 184
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr4:62772078-62771806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
89, 115
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr4:42922005-42921734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 85
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr4:23646996-23646690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 50
               

               
Conread position:
               
2-347
               

               
Cow position:
               
chr4:13344393-13344727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 75
               

               
Conread position:
               
3-190
               

               
Cow position:
               
chr4:21517157-21516971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 52
               

               
Conread position:
               
3-238
               

               
Cow position:
               
chr4:25972745-25972977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
52, 32
               

               
Conread position:
               
3-246
               

               
Cow position:
               
chr4:45918884-45919121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
119, 60
               

               
Conread position:
               
3-261
               

               
Cow position:
               
chr4:33030400-33030653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
123, 54
               

               
Conread position:
               
3-335
               

               
Cow position:
               
chr4:4826974-4827312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
35, 5
               

               
Conread position:
               
3-343
               

               
Cow position:
               
chr4:31004560-31004225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
34, 127
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr4:12591366-12591028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
28, 94
               

               
Conread position:
               
3-353
               

               
Cow position:
               
chr4:41371092-41370744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
316, 20
               

               
Conread position:
               
3-354
               

               
Cow position:
               
chr4:68569805-68569446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
29, 163
               

               
Conread position:
               
3-447
               

               
Cow position:
               
chr4:56590883-56591332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
28, 123
               

               
Conread position:
               
4-162
               

               
Cow position:
               
chr4:18576924-18576766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
100, 23
               

               
Conread position:
               
4-164
               

               
Cow position:
               
chr4:36724887-36725047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
123, 144
               

               
Conread position:
               
4-190
               

               
Cow position:
               
chr4:53209086-53209269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
33, 91
               

               
Conread position:
               
4-196
               

               
Cow position:
               
chr4:19463344-19463534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
4-224
               

               
Cow position:
               
chr4:2885695-2885474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
32, 15
               

               
Conread position:
               
4-229
               

               
Cow position:
               
chr4:41602698-41602920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
126, 73
               

               
Conread position:
               
4-234
               

               
Cow position:
               
chr4:23854045-23854256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
4-234
               

               
Cow position:
               
chr4:51739860-51739641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
4-238
               

               
Cow position:
               
chr4:5461013-5460781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
114, 31
               

               
Conread position:
               
4-238
               

               
Cow position:
               
chr4:13974120-13973890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
93, 125
               

               
Conread position:
               
4-239
               

               
Cow position:
               
chr4:21257276-21257044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
126, 61
               

               
Conread position:
               
4-255
               

               
Cow position:
               
chr4:54111596-54111838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
45, 114
               

               
Conread position:
               
4-262
               

               
Cow position:
               
chr4:53346175-53346434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
50, 80
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr4:55395609-55395867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
33, 144
               

               
Conread position:
               
4-268
               

               
Cow position:
               
chr4:10378957-10379221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
128, 110
               

               
Conread position:
               
4-268
               

               
Cow position:
               
chr4:12560879-12561150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
120, 73
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr4:25879244-25879507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 113
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr4:44782222-44782491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
111, 124
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr4:45644459-45644202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr4:54190937-54191206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 54
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr4:59377763-59378026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
4-279
               

               
Cow position:
               
chr4:44839036-44838775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
102, 20
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr4:2602080-2602355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
32, 123
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr4:65950497-65950779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 117
               

               
Conread position:
               
4-305
               

               
Cow position:
               
chr4:46456212-46455919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
29, 110
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr4:23600027-23600318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 69
               

               
Conread position:
               
4-312
               

               
Cow position:
               
chr4:38999275-38999578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
69, 15
               

               
Conread position:
               
4-316
               

               
Cow position:
               
chr4:25888981-25888686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
33, 56
               

               
Conread position:
               
4-319
               

               
Cow position:
               
chr4:7571259-7571570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 30
               

               
Conread position:
               
4-330
               

               
Cow position:
               
chr4:42423949-42423631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 38
               

               
Conread position:
               
4-332
               

               
Cow position:
               
chr4:22010212-22009886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
88, 33
               

               
Conread position:
               
4-335
               

               
Cow position:
               
chr4:53208144-53208462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 33
               

               
Conread position:
               
4-336
               

               
Cow position:
               
chr4:43740370-43740711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
31, 161
               

               
Conread position:
               
4-342
               

               
Cow position:
               
chr4:13589936-13590273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
27, 104
               

               
Conread position:
               
4-342
               

               
Cow position:
               
chr4:23509441-23509777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 145
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr4:27276697-27276358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
27, 111
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr4:29384373-29384054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
317, 81
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr4:59785166-59785507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
30, 94
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr4:68233825-68234150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
143, 15
               

               
Conread position:
               
4-346
               

               
Cow position:
               
chr4:23847199-23846864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 102
               

               
Conread position:
               
4-346
               

               
Cow position:
               
chr4:47730707-47731054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 23
               

               
Conread position:
               
4-347
               

               
Cow position:
               
chr4:10732071-10732413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
27, 110
               

               
Conread position:
               
4-347
               

               
Cow position:
               
chr4:19744734-19745061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
128, 144
               

               
Conread position:
               
4-347
               

               
Cow position:
               
chr4:59871334-59871671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
235, 72
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr4:3388393-3388734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
29, 106
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr4:12676653-12676987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
43, 111
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr4:29291368-29291698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
310, 115
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr4:45662659-45662324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
176, 25
               

               
Conread position:
               
4-350
               

               
Cow position:
               
chr4:14152937-14153310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 148
               

               
Conread position:
               
4-351
               

               
Cow position:
               
chr4:30974189-30974529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
317, 104
               

               
Conread position:
               
4-355
               

               
Cow position:
               
chr4:21064887-21065223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 15
               

               
Conread position:
               
4-358
               

               
Cow position:
               
chr4:8801352-8801690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 5
               

               
Conread position:
               
4-358
               

               
Cow position:
               
chr4:22345169-22344826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
33, 53
               

               
Conread position:
               
4-359
               

               
Cow position:
               
chr4:22713642-22713295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
27, 103
               

               
Conread position:
               
4-359
               

               
Cow position:
               
chr4:23445204-23444836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
28, 148
               

               
Conread position:
               
4-359
               

               
Cow position:
               
chr4:23526543-23526899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
22, 5
               

               
Conread position:
               
4-359
               

               
Cow position:
               
chr4:27529966-27530314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 91
               

               
Conread position:
               
4-359
               

               
Cow position:
               
chr4:49794523-49794853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
4-359
               

               
Cow position:
               
chr4:51768961-51769311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
35, 48
               

               
Conread position:
               
4-359
               

               
Cow position:
               
chr4:54455494-54455144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 121
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr4:22138383-22138012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
38, 151
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr4:66547918-66547560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 54
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr4:203293-202937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
108, 126
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr4:12127793-12127435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
35, 99
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr4:18974280-18974630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 47
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr4:19118855-19119223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 152
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr4:36290477-36290826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 116
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr4:37915489-37915133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 148
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr4:45077225-45076874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
150, 50
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr4:68076681-68076334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
27, 110
               

               
Conread position:
               
4-362
               

               
Cow position:
               
chr4:31506183-31505812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
109, 149
               

               
Conread position:
               
4-362
               

               
Cow position:
               
chr4:34369604-34369260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
33, 55
               

               
Conread position:
               
4-366
               

               
Cow position:
               
chr4:34310602-34310255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
33, 99
               

               
Conread position:
               
4-366
               

               
Cow position:
               
chr4:41867293-41867658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 69
               

               
Conread position:
               
4-368
               

               
Cow position:
               
chr4:11099820-11099448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
102, 145
               

               
Conread position:
               
4-383
               

               
Cow position:
               
chr4:34641877-34641498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
4-473
               

               
Cow position:
               
chr4:34630743-34631223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 53
               

               
Conread position:
               
5-143
               

               
Cow position:
               
chr4:34223969-34224101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
108, 76
               

               
Conread position:
               
5-176
               

               
Cow position:
               
chr4:47047743-47047913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
5-188
               

               
Cow position:
               
chr4:24458249-24458073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr4:17124446-17124258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
74, 120
               

               
Conread position:
               
5-224
               

               
Cow position:
               
chr4:17112027-17111808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
76, 106
               

               
Conread position:
               
5-224
               

               
Cow position:
               
chr4:44973486-44973700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
43, 110
               

               
Conread position:
               
5-228
               

               
Cow position:
               
chr4:54930575-54930352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 124
               

               
Conread position:
               
5-235
               

               
Cow position:
               
chr4:42673025-42673253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
124, 41
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr4:22860862-22860605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
127, 33
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr4:33433414-33433138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 148
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr4:45738628-45738359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
51, 30
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr4:11194035-11194302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
131, 30
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr4:65650275-65650016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 48
               

               
Conread position:
               
5-277
               

               
Cow position:
               
chr4:19582767-19582500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
109, 87
               

               
Conread position:
               
5-308
               

               
Cow position:
               
chr4:68889707-68889422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
5-319
               

               
Cow position:
               
chr4:19097139-19097451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 60
               

               
Conread position:
               
5-327
               

               
Cow position:
               
chr4:13255938-13256242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
5-346
               

               
Cow position:
               
chr4:62471922-62472266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 126
               

               
Conread position:
               
5-348
               

               
Cow position:
               
chr4:4084598-4084264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 82
               

               
Conread position:
               
5-348
               

               
Cow position:
               
chr4:11872058-11871721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 77
               

               
Conread position:
               
5-348
               

               
Cow position:
               
chr4:13693824-13693482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 111
               

               
Conread position:
               
5-348
               

               
Cow position:
               
chr4:68764365-68764711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
26, 127
               

               
Conread position:
               
5-350
               

               
Cow position:
               
chr4:56240000-56239670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
5-352
               

               
Cow position:
               
chr4:9681150-9681487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 112
               

               
Conread position:
               
5-352
               

               
Cow position:
               
chr4:37935434-37935106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
5-353
               

               
Cow position:
               
chr4:51898857-51899219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
123, 111
               

               
Conread position:
               
5-356
               

               
Cow position:
               
chr4:27632300-27632642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
264, 109
               

               
Conread position:
               
5-356
               

               
Cow position:
               
chr4:34022737-34022386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 119
               

               
Conread position:
               
5-359
               

               
Cow position:
               
chr4:36841133-36841462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
79, 110
               

               
Conread position:
               
5-359
               

               
Cow position:
               
chr4:68805880-68806205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
314, 62
               

               
Conread position:
               
5-360
               

               
Cow position:
               
chr4:3340801-3341157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 112
               

               
Conread position:
               
5-360
               

               
Cow position:
               
chr4:49158935-49158586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
14, 88
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr4:14542829-14542466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
28, 115
               

               
Conread position:
               
6-260
               

               
Cow position:
               
chr4:65179277-65179044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
173, 50
               

               
Conread position:
               
6-268
               

               
Cow position:
               
chr4:27755450-27755192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 110
               

               
Conread position:
               
6-271
               

               
Cow position:
               
chr4:51784029-51784292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
130, 108
               

               
Conread position:
               
6-275
               

               
Cow position:
               
chr4:37704117-37704381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
6-293
               

               
Cow position:
               
chr4:53100660-53100942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
109, 43
               

               
Conread position:
               
6-348
               

               
Cow position:
               
chr4:16881512-16881181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
170, 108
               

               
Conread position:
               
6-348
               

               
Cow position:
               
chr4:36929168-36929484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
6-348
               

               
Cow position:
               
chr4:54524479-54524138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
106, 43
               

               
Conread position:
               
6-350
               

               
Cow position:
               
chr4:15904949-15905301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
195, 141
               

               
Conread position:
               
6-360
               

               
Cow position:
               
chr4:48409415-48409085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 45
               

               
Conread position:
               
6-361
               

               
Cow position:
               
chr4:45685319-45685659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
311, 57
               

               
Conread position:
               
7-265
               

               
Cow position:
               
chr4:3850408-3850657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
7-336
               

               
Cow position:
               
chr4:34166126-34165806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
29, 108
               

               
Conread position:
               
7-364
               

               
Cow position:
               
chr4:29106755-29107121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
25, 121
               

               
Conread position:
               
8-263
               

               
Cow position:
               
chr4:12903671-12903925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
118, 108
               

               
Conread position:
               
8-264
               

               
Cow position:
               
chr4:2141598-2141843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
86, 142
               

               
Conread position:
               
8-276
               

               
Cow position:
               
chr4:30169970-30169710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
246, 16
               

               
Conread position:
               
8-277
               

               
Cow position:
               
chr4:43866005-43865739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 13
               

               
Conread position:
               
8-284
               

               
Cow position:
               
chr4:21874669-21874929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
261, 41
               

               
Conread position:
               
8-298
               

               
Cow position:
               
chr4:36577777-36577490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
160, 95
               

               
Conread position:
               
8-316
               

               
Cow position:
               
chr4:6653582-6653881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
263, 77
               

               
Conread position:
               
8-347
               

               
Cow position:
               
chr4:33971045-33970714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 48
               

               
Conread position:
               
8-347
               

               
Cow position:
               
chr4:56570658-56570982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
28, 108
               

               
Conread position:
               
8-353
               

               
Cow position:
               
chr4:20027248-20026907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 59
               

               
Conread position:
               
8-360
               

               
Cow position:
               
chr4:25197644-25197286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
23, 92
               

               
Conread position:
               
8-361
               

               
Cow position:
               
chr4:509050-508705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
25, 48
               

               
Conread position:
               
9-348
               

               
Cow position:
               
chr4:3687777-3688121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 88
               

               
Conread position:
               
9-348
               

               
Cow position:
               
chr4:19408146-19407798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 108
               

               
Conread position:
               
9-352
               

               
Cow position:
               
chr4:54927586-54927234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 58
               

               
Conread position:
               
9-357
               

               
Cow position:
               
chr4:1026371-1026035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
98, 62
               

               
Conread position:
               
9-359
               

               
Cow position:
               
chr4:17186499-17186147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 119
               

               
Conread position:
               
9-361
               

               
Cow position:
               
chr4:3283593-3283252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 56
               

               
Conread position:
               
9-361
               

               
Cow position:
               
chr4:62317298-62317655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
23, 66
               

               
Conread position:
               
9-389
               

               
Cow position:
               
chr4:66256535-66256911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
19, 99
               

               
Conread position:
               
10-319
               

               
Cow position:
               
chr4:68387646-68387948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 132
               

               
Conread position:
               
12-165
               

               
Cow position:
               
chr4:22215795-22215646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
95, 82
               

               
Conread position:
               
12-263
               

               
Cow position:
               
chr4:20775-21017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 48
               

               
Conread position:
               
12-276
               

               
Cow position:
               
chr4:41301134-41300881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
17, 109
               

               
Conread position:
               
12-276
               

               
Cow position:
               
chr4:58881106-58880845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
12-342
               

               
Cow position:
               
chr4:19699963-19700293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 96
               

               
Conread position:
               
12-350
               

               
Cow position:
               
chr4:16762870-16762525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
19, 44
               

               
Conread position:
               
12-361
               

               
Cow position:
               
chr4:24810584-24810248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 95
               

               
Conread position:
               
12-366
               

               
Cow position:
               
chr4:20184570-20184889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
107, 33
               

               
Conread position:
               
14-344
               

               
Cow position:
               
chr4:64192332-64191992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
35, 139
               

               
Conread position:
               
14-361
               

               
Cow position:
               
chr4:15635589-15635243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
308, 21
               

               
Conread position:
               
15-361
               

               
Cow position:
               
chr4:15439438-15439790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
23, 100
               

               
Conread position:
               
16-330
               

               
Cow position:
               
chr4:54872166-54871849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 63
               

               
Conread position:
               
16-331
               

               
Cow position:
               
chr4:44449645-44449349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
25, 63
               

               
Conread position:
               
16-348
               

               
Cow position:
               
chr4:1014928-1015263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
16, 97
               

               
Conread position:
               
16-371
               

               
Cow position:
               
chr4:7964795-7964431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
17-252
               

               
Cow position:
               
chr4:38952414-38952647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
17-361
               

               
Cow position:
               
chr4:25356444-25356125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
253, 12
               

               
Conread position:
               
18-347
               

               
Cow position:
               
chr4:85553-85885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 57
               

               
Conread position:
               
19-184
               

               
Cow position:
               
chr4:26011716-26011877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
92, 110
               

               
Conread position:
               
19-224
               

               
Cow position:
               
chr4:13771525-13771335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
19-239
               

               
Cow position:
               
chr4:16799324-16799105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
19-255
               

               
Cow position:
               
chr4:8413256-8413026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
34, 99
               

               
Conread position:
               
19-300
               

               
Cow position:
               
chr4:49089653-49089927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
207, 8
               

               
Conread position:
               
19-314
               

               
Cow position:
               
chr4:25537409-25537705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 130
               

               
Conread position:
               
19-337
               

               
Cow position:
               
chr4:46526860-46527185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 97
               

               
Conread position:
               
19-348
               

               
Cow position:
               
chr4:21874038-21874370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 58
               

               
Conread position:
               
19-361
               

               
Cow position:
               
chr4:52779716-52780049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
214, 101
               

               
Conread position:
               
20-246
               

               
Cow position:
               
chr4:20139660-20139429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
26, 135
               

               
Conread position:
               
22-264
               

               
Cow position:
               
chr4:5913482-5913240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 87
               

               
Conread position:
               
22-268
               

               
Cow position:
               
chr4:24481797-24481564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
140, 29
               

               
Conread position:
               
22-328
               

               
Cow position:
               
chr4:63965122-63964826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 72
               

               
Conread position:
               
24-343
               

               
Cow position:
               
chr4:52832149-52831828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 54
               

               
Conread position:
               
25-298
               

               
Cow position:
               
chr4:48396924-48396657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
142, 72
               

               
Conread position:
               
26-350
               

               
Cow position:
               
chr4:38946079-38946413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
104, 165
               

               
Conread position:
               
27-361
               

               
Cow position:
               
chr4:1419094-1419429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 120
               

               
Conread position:
               
29-343
               

               
Cow position:
               
chr4:34700164-34699857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
77, 124
               

               
Conread position:
               
29-359
               

               
Cow position:
               
chr4:19578277-19578586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 27
               

               
Conread position:
               
30-361
               

               
Cow position:
               
chr4:4085246-4084903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 98
               

               
Conread position:
               
41-231
               

               
Cow position:
               
chr4:67466608-67466795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
41-291
               

               
Cow position:
               
chr4:17084455-17084207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
83, 107
               

               
Conread position:
               
41-360
               

               
Cow position:
               
chr4:38157205-38156891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 109
               

               
Conread position:
               
41-360
               

               
Cow position:
               
chr4:46494182-46494505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
14, 19
               

               
Conread position:
               
57-207
               

               
Cow position:
               
chr4:12920173-12920318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
57-348
               

               
Cow position:
               
chr4:45636066-45636364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
27, 7
               

               
Conread position:
               
57-361
               

               
Cow position:
               
chr4:65265409-65265083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
57-364
               

               
Cow position:
               
chr4:69455723-69455420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
54, 14
               

               
Conread position:
               
59-196
               

               
Cow position:
               
chr4:2096224-2096360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 70
               

               
Conread position:
               
59-238
               

               
Cow position:
               
chr4:13026206-13026384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 55
               

               
Conread position:
               
59-298
               

               
Cow position:
               
chr4:9127-8893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
71, 6
               

               
Conread position:
               
59-335
               

               
Cow position:
               
chr4:45073968-45074229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
59-336
               

               
Cow position:
               
chr4:54789543-54789823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
54, 68
               

               
Conread position:
               
59-343
               

               
Cow position:
               
chr4:13222279-13221993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
210, 49
               

               
Conread position:
               
59-348
               

               
Cow position:
               
chr4:37732579-37732287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
187, 67
               

               
Conread position:
               
59-349
               

               
Cow position:
               
chr4:37675519-37675820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
48, 89
               

               
Conread position:
               
59-351
               

               
Cow position:
               
chr4:46566571-46566276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 184
               

               
Conread position:
               
59-361
               

               
Cow position:
               
chr4:213923-214216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
60, 22
               

               
Conread position:
               
59-361
               

               
Cow position:
               
chr4:11610780-11611068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
262, 55
               

               
Conread position:
               
59-363
               

               
Cow position:
               
chr4:9444783-9444477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
223, 56
               

               
Conread position:
               
60-239
               

               
Cow position:
               
chr4:51729857-51730031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
174, 54
               

               
Conread position:
               
60-275
               

               
Cow position:
               
chr4:34503197-34503412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
72, 56
               

               
Conread position:
               
60-312
               

               
Cow position:
               
chr4:46477048-46476785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
48, 66
               

               
Conread position:
               
61-356
               

               
Cow position:
               
chr4:30250364-30250082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
69, 36
               

               
Conread position:
               
62-343
               

               
Cow position:
               
chr4:19102978-19102689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 70
               

               
Conread position:
               
62-356
               

               
Cow position:
               
chr4:19333302-19333583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
63-337
               

               
Cow position:
               
chr4:24093232-24092950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
79, 56
               

               
Conread position:
               
63-361
               

               
Cow position:
               
chr4:45626714-45626436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
63-362
               

               
Cow position:
               
chr4:44773138-44772832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
31, 66
               

               
Conread position:
               
64-349
               

               
Cow position:
               
chr4:38822409-38822125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
170, 83
               

               
Conread position:
               
65-359
               

               
Cow position:
               
chr4:11969372-11969658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
66-276
               

               
Cow position:
               
chr4:19323884-19324091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
66-356
               

               
Cow position:
               
chr4:69169565-69169849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
178, 40
               

               
Conread position:
               
66-359
               

               
Cow position:
               
chr4:19292631-19292918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
49, 61
               

               
Conread position:
               
68-276
               

               
Cow position:
               
chr4:49826166-49826369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
180, 29
               

               
Conread position:
               
68-320
               

               
Cow position:
               
chr4:61188957-61188705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
201, 56
               

               
Conread position:
               
69-265
               

               
Cow position:
               
chr4:66136691-66136502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
69-361
               

               
Cow position:
               
chr4:53126030-53126306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
275, 45
               

               
Conread position:
               
70-276
               

               
Cow position:
               
chr4:19098380-19098589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
55, 79
               

               
Conread position:
               
73-361
               

               
Cow position:
               
chr4:34509758-34510035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 10
               

               
Conread position:
               
74-265
               

               
Cow position:
               
chr4:5964069-5963882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
105, 40
               

               
Conread position:
               
75-231
               

               
Cow position:
               
chr4:19493472-19493628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
75-283
               

               
Cow position:
               
chr4:10851529-10851327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
76-251
               

               
Cow position:
               
chr4:13991034-13990866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
31, 41
               

               
Conread position:
               
76-361
               

               
Cow position:
               
chr4:37991518-37991793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
191, 48
               

               
Conread position:
               
76-380
               

               
Cow position:
               
chr4:59002213-59001918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 43
               

               
Conread position:
               
77-348
               

               
Cow position:
               
chr4:60719021-60719284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
24, 40
               

               
Conread position:
               
77-361
               

               
Cow position:
               
chr4:45705967-45706246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
171, 44
               

               
Conread position:
               
78-320
               

               
Cow position:
               
chr4:34562302-34562542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
89, 81
               

               
Conread position:
               
78-348
               

               
Cow position:
               
chr4:46435245-46435526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
191, 71
               

               
Conread position:
               
78-361
               

               
Cow position:
               
chr4:69290816-69290537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 42
               

               
Conread position:
               
80-275
               

               
Cow position:
               
chr4:61478526-61478725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
19, 71
               

               
Conread position:
               
80-288
               

               
Cow position:
               
chr4:61235278-61235075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
52, 17
               

               
Conread position:
               
80-361
               

               
Cow position:
               
chr4:65463572-65463311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
239, 26
               

               
Conread position:
               
80-368
               

               
Cow position:
               
chr4:8182715-8182423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
81-363
               

               
Cow position:
               
chr4:48422801-48423076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
237, 68
               

               
Conread position:
               
83-360
               

               
Cow position:
               
chr4:53134520-53134803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
86-347
               

               
Cow position:
               
chr4:68456988-68456725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
184, 40
               

               
Conread position:
               
87-361
               

               
Cow position:
               
chr4:26830634-26830928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
64, 37
               

               
Conread position:
               
88-282
               

               
Cow position:
               
chr4:54541708-54541514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
41, 60
               

               
Conread position:
               
88-347
               

               
Cow position:
               
chr4:49800626-49800882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
177, 39
               

               
Conread position:
               
89-255
               

               
Cow position:
               
chr4:42176538-42176377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
90-352
               

               
Cow position:
               
chr4:28701289-28701541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
21, 62
               

               
Conread position:
               
90-353
               

               
Cow position:
               
chr4:38210043-38209778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 58
               

               
Conread position:
               
94-361
               

               
Cow position:
               
chr4:26012335-26012621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 30
               

               
Conread position:
               
94-364
               

               
Cow position:
               
chr4:17851314-17851053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
97-276
               

               
Cow position:
               
chr4:65131513-65131337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
100-346
               

               
Cow position:
               
chr4:12441840-12442099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
161, 19
               

               
Conread position:
               
100-346
               

               
Cow position:
               
chr4:13241570-13241829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
161, 19
               

               
Conread position:
               
104-368
               

               
Cow position:
               
chr4:65173049-65173313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
105-390
               

               
Cow position:
               
chr4:19431748-19431459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
143, 42
               

               
Conread position:
               
106-287
               

               
Cow position:
               
chr4:44903241-44903421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
16, 45
               

               
Conread position:
               
107-332
               

               
Cow position:
               
chr4:60506226-60506452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
161, 42
               

               
Conread position:
               
107-359
               

               
Cow position:
               
chr4:20125016-20124765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
106, 19
               

               
Conread position:
               
110-347
               

               
Cow position:
               
chr4:16221922-16221680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
160, 19
               

               
Conread position:
               
110-348
               

               
Cow position:
               
chr4:10558489-10558728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 16
               

               
Conread position:
               
112-352
               

               
Cow position:
               
chr4:60141561-60141330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
207, 12
               

               
Conread position:
               
114-311
               

               
Cow position:
               
chr4:60443083-60442890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
178, 32
               

               
Conread position:
               
114-348
               

               
Cow position:
               
chr4:35638947-35638714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
25, 34
               

               
Conread position:
               
114-348
               

               
Cow position:
               
chr4:54391061-54390822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
155, 33
               

               
Conread position:
               
114-352
               

               
Cow position:
               
chr4:68590733-68590965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
116-320
               

               
Cow position:
               
chr4:3268404-3268209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
116-361
               

               
Cow position:
               
chr4:2681294-2681533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
156, 7
               

               
Conread position:
               
117-343
               

               
Cow position:
               
chr4:14020462-14020686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
140, 9
               

               
Conread position:
               
119-269
               

               
Cow position:
               
chr4:56336628-56336775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
120-361
               

               
Cow position:
               
chr4:60303052-60302809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
74, 26
               

               
Conread position:
               
122-337
               

               
Cow position:
               
chr4:18951938-18952159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
132, 27
               

               
Conread position:
               
122-337
               

               
Cow position:
               
chr4:34653905-34653694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
126-356
               

               
Cow position:
               
chr4:23655942-23656172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
130, 23
               

               
Conread position:
               
126-361
               

               
Cow position:
               
chr4:19238186-19238423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 71
               

               
Conread position:
               
127-360
               

               
Cow position:
               
chr4:44854320-44854085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
163, 19
               

               
Conread position:
               
127-361
               

               
Cow position:
               
chr4:5790614-5790850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
158, 27
               

               
Conread position:
               
127-361
               

               
Cow position:
               
chr4:46404934-46404706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
45, 20
               

               
Conread position:
               
127-364
               

               
Cow position:
               
chr4:5727814-5728039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
80, 22
               

               
Conread position:
               
127-364
               

               
Cow position:
               
chr4:39007478-39007701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
130-320
               

               
Cow position:
               
chr4:26901300-26901483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
131-336
               

               
Cow position:
               
chr4:48381355-48381570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
122, 20
               

               
Conread position:
               
132-366
               

               
Cow position:
               
chr4:21506981-21506757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
187, 15
               

               
Conread position:
               
133-343
               

               
Cow position:
               
chr4:12047848-12048065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
84, 16
               

               
Conread position:
               
133-360
               

               
Cow position:
               
chr4:19089870-19090092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
67, 16
               

               
Conread position:
               
134-352
               

               
Cow position:
               
chr4:43916265-43916489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
131, 12
               

               
Conread position:
               
134-360
               

               
Cow position:
               
chr4:33838823-33838599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
185, 15
               

               
Conread position:
               
135-348
               

               
Cow position:
               
chr4:4295564-4295770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
184, 16
               

               
Conread position:
               
135-348
               

               
Cow position:
               
chr4:18099084-18098869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
177, 14
               

               
Conread position:
               
135-349
               

               
Cow position:
               
chr4:386414-386201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
142, 14
               

               
Conread position:
               
135-349
               

               
Cow position:
               
chr4:47305055-47305274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
113, 12
               

               
Conread position:
               
135-361
               

               
Cow position:
               
chr4:19539259-19539027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
131, 12
               

               
Conread position:
               
135-361
               

               
Cow position:
               
chr4:45213212-45212980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
136-310
               

               
Cow position:
               
chr4:69305606-69305779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
78, 11
               

               
Conread position:
               
137-348
               

               
Cow position:
               
chr4:27699012-27699232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
128, 10
               

               
Conread position:
               
137-348
               

               
Cow position:
               
chr4:61391246-61391043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
182, 7
               

               
Conread position:
               
137-352
               

               
Cow position:
               
chr4:50687881-50687669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
147, 10
               

               
Conread position:
               
138-314
               

               
Cow position:
               
chr4:13995367-13995543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
115, 52
               

               
Conread position:
               
138-318
               

               
Cow position:
               
chr4:34983515-34983344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
138-350
               

               
Cow position:
               
chr4:61608984-61608773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
183, 11
               

               
Conread position:
               
138-356
               

               
Cow position:
               
chr4:67393072-67393296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
132, 9
               

               
Conread position:
               
139-372
               

               
Cow position:
               
chr4:21161087-21161320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
180, 10
               

               
Conread position:
               
142-348
               

               
Cow position:
               
chr4:29318091-29317876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
112, 7
               

               
Conread position:
               
149-345
               

               
Cow position:
               
chr4:41907591-41907393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
169, 98
               

               
Conread position:
               
149-355
               

               
Cow position:
               
chr4:32790012-32789817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
170, 57
               

               
Conread position:
               
151-312
               

               
Cow position:
               
chr4:54650492-54650331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
25, 97
               

               
Conread position:
               
151-360
               

               
Cow position:
               
chr4:561625-561834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
167, 30
               

               
Conread position:
               
153-361
               

               
Cow position:
               
chr4:13193963-13194163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
200, 27
               

               
Conread position:
               
155-337
               

               
Cow position:
               
chr4:69497112-69497294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
155-348
               

               
Cow position:
               
chr4:32601834-32602018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
164, 42
               

               
Conread position:
               
156-348
               

               
Cow position:
               
chr4:59015590-59015773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
161, 24
               

               
Conread position:
               
156-353
               

               
Cow position:
               
chr4:56410343-56410542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
166, 74
               

               
Conread position:
               
156-361
               

               
Cow position:
               
chr4:56395510-56395722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
28, 18
               

               
Conread position:
               
157-346
               

               
Cow position:
               
chr4:61887635-61887831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
159-345
               

               
Cow position:
               
chr4:42374155-42373966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
98, 102
               

               
Conread position:
               
160-335
               

               
Cow position:
               
chr4:19122874-19123049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
159, 87
               

               
Conread position:
               
160-347
               

               
Cow position:
               
chr4:51083336-51083149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
156, 88
               

               
Conread position:
               
163-361
               

               
Cow position:
               
chr4:39010054-39010259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
106, 94
               

               
Conread position:
               
164-361
               

               
Cow position:
               
chr4:35974368-35974574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
94, 77
               

               
Conread position:
               
164-366
               

               
Cow position:
               
chr4:23985119-23984909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 184
               

               
Conread position:
               
165-348
               

               
Cow position:
               
chr4:47048124-47048306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
165-361
               

               
Cow position:
               
chr4:22071665-22071468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
86, 187
               

               
Conread position:
               
166-352
               

               
Cow position:
               
chr4:21275593-21275417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
166-352
               

               
Cow position:
               
chr4:50494779-50494975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
166-361
               

               
Cow position:
               
chr4:3519429-3519624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
153, 75
               

               
Conread position:
               
167-358
               

               
Cow position:
               
chr4:45963892-45964093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
167-365
               

               
Cow position:
               
chr4:63261479-63261682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
169-360
               

               
Cow position:
               
chr4:22331135-22331324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
110, 72
               

               
Conread position:
               
170-332
               

               
Cow position:
               
chr4:61848908-61848741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
170-352
               

               
Cow position:
               
chr4:479780-479606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
170-366
               

               
Cow position:
               
chr4:48227676-48227487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
171-320
               

               
Cow position:
               
chr4:53380700-53380852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
102, 76
               

               
Conread position:
               
171-345
               

               
Cow position:
               
chr4:27656990-27657161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
147, 15
               

               
Conread position:
               
172-344
               

               
Cow position:
               
chr4:22215497-22215325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
145, 85
               

               
Conread position:
               
175-348
               

               
Cow position:
               
chr4:62794347-62794164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
102, 72
               

               
Conread position:
               
178-350
               

               
Cow position:
               
chr4:65291836-65291669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
138, 63
               

               
Conread position:
               
179-351
               

               
Cow position:
               
chr4:34919249-34919079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
142, 30
               

               
Conread position:
               
181-348
               

               
Cow position:
               
chr4:19330747-19330580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
182-360
               

               
Cow position:
               
chr4:56307826-56308003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
104, 76
               

               
Conread position:
               
183-360
               

               
Cow position:
               
chr4:38940918-38940735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
183-366
               

               
Cow position:
               
chr4:25929241-25929419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
138, 64
               

               
Conread position:
               
185-364
               

               
Cow position:
               
chr4:23925358-23925165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
186-335
               

               
Cow position:
               
chr4:60621568-60621416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
86, 71
               

               
Conread position:
               
186-348
               

               
Cow position:
               
chr4:51026377-51026543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
21, 73
               

               
Conread position:
               
186-372
               

               
Cow position:
               
chr4:30943982-30944170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
136, 72
               

               
Conread position:
               
187-340
               

               
Cow position:
               
chr4:36070731-36070886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
78, 92
               

               
Conread position:
               
187-346
               

               
Cow position:
               
chr4:20153520-20153364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
132, 59
               

               
Conread position:
               
187-348
               

               
Cow position:
               
chr4:28854246-28854084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
130, 71
               

               
Conread position:
               
187-350
               

               
Cow position:
               
chr4:39569232-39569394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
132, 60
               

               
Conread position:
               
187-361
               

               
Cow position:
               
chr4:12713998-12713830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
187-361
               

               
Cow position:
               
chr4:12716867-12716701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
187-361
               

               
Cow position:
               
chr4:68776964-68777142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
51, 162
               

               
Conread position:
               
188-346
               

               
Cow position:
               
chr4:61524462-61524620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
133, 22
               

               
Conread position:
               
193-315
               

               
Cow position:
               
chr4:27425746-27425865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
194-347
               

               
Cow position:
               
chr4:12908409-12908560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
125, 64
               

               
Conread position:
               
200-348
               

               
Cow position:
               
chr4:10786098-10785948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
116, 32
               

               
Conread position:
               
200-354
               

               
Cow position:
               
chr4:19503970-19504121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
119, 47
               

               
Conread position:
               
202-359
               

               
Cow position:
               
chr4:42608782-42608942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
68, 45
               

               
Conread position:
               
202-362
               

               
Cow position:
               
chr4:19463588-19463753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 39
               

               
Conread position:
               
213-352
               

               
Cow position:
               
chr4:34544361-34544501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
106, 53
               

               
Conread position:
               
229-361
               

               
Cow position:
               
chr4:61193270-61193142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
87, 19
               

               
Conread position:
               
232-352
               

               
Cow position:
               
chr4:22701736-22701616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
84, 26
               

               
Conread position:
               
233-359
               

               
Cow position:
               
chr4:45386896-45387023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
87, 24
               

               
Conread position:
               
244-356
               

               
Cow position:
               
chr4:33151568-33151685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               
Show alignments to all cow chromosomes.