Non-Coding RNA Search

Cow genome map


           Conread name:
           Ova1-OVRM10125H10
        

               Conread position:
               1-158
               

               Cow position:
               chr5:34288589-34288435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               128, 22
               

               Conread position:
               1-167
               

               Cow position:
               chr5:34916018-34916173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-181
               

               Cow position:
               chr5:3627274-3627096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               39, 125
               

               Conread position:
               1-183
               

               Cow position:
               chr5:43474726-43474904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               166, 113
               

               Conread position:
               1-203
               

               Cow position:
               chr5:50799419-50799612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               1-222
               

               Cow position:
               chr5:67540324-67540104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               133, 87
               

               Conread position:
               1-223
               

               Cow position:
               chr5:63865674-63865893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               123, 148
               

               Conread position:
               1-237
               

               Cow position:
               chr5:46425972-46425743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               109, 82
               

               Conread position:
               1-239
               

               Cow position:
               chr5:20407788-20407564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               1-251
               

               Cow position:
               chr5:57626685-57626914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-255
               

               Cow position:
               chr5:37814503-37814756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               95, 7
               

               Conread position:
               1-255
               

               Cow position:
               chr5:50821661-50821913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               1-256
               

               Cow position:
               chr5:19813336-19813089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               105, 55
               

               Conread position:
               1-260
               

               Cow position:
               chr5:45803942-45804194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               191
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               137, 54
               

               Conread position:
               1-261
               

               Cow position:
               chr5:57575648-57575909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 107
               

               Conread position:
               1-261
               

               Cow position:
               chr5:58855982-58856238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               47, 114
               

               Conread position:
               1-264
               

               Cow position:
               chr5:14629934-14629666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               131, 147
               

               Conread position:
               1-265
               

               Cow position:
               chr5:74015819-74016079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               1-268
               

               Cow position:
               chr5:30950037-30949773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               1-275
               

               Cow position:
               chr5:56317177-56317438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               1-276
               

               Cow position:
               chr5:25231125-25230867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               261, 55
               

               Conread position:
               1-276
               

               Cow position:
               chr5:41546010-41545743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               202
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               128, 36
               

               Conread position:
               1-284
               

               Cow position:
               chr5:4166541-4166802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               247, 37
               

               Conread position:
               1-291
               

               Cow position:
               chr5:43457637-43457366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               206, 55
               

               Conread position:
               1-297
               

               Cow position:
               chr5:37646667-37646375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               211
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               67, 14
               

               Conread position:
               1-304
               

               Cow position:
               chr5:7755683-7755383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 107
               

               Conread position:
               1-315
               

               Cow position:
               chr5:66366397-66366700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 33
               

               Conread position:
               1-320
               

               Cow position:
               chr5:56877367-56877666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               198, 45
               

               Conread position:
               1-320
               

               Cow position:
               chr5:65967849-65967537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 80
               

               Conread position:
               1-324
               

               Cow position:
               chr5:26377788-26377480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               167, 35
               

               Conread position:
               1-330
               

               Cow position:
               chr5:17768264-17767944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               237
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               179, 20
               

               Conread position:
               1-330
               

               Cow position:
               chr5:69461213-69461541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 82
               

               Conread position:
               1-331
               

               Cow position:
               chr5:6286545-6286242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               235
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-336
               

               Cow position:
               chr5:65776503-65776162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               236
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               268, 121
               

               Conread position:
               1-343
               

               Cow position:
               chr5:29827928-29828270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               164, 107
               

               Conread position:
               1-344
               

               Cow position:
               chr5:62172295-62172621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               1-345
               

               Cow position:
               chr5:40109378-40109708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               316, 57
               

               Conread position:
               1-346
               

               Cow position:
               chr5:5111194-5110833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 18
               

               Conread position:
               1-347
               

               Cow position:
               chr5:12322922-12322585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 86
               

               Conread position:
               1-347
               

               Cow position:
               chr5:23168946-23168604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 53
               

               Conread position:
               1-347
               

               Cow position:
               chr5:25035364-25035028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 105
               

               Conread position:
               1-347
               

               Cow position:
               chr5:57101897-57101571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               256
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               23, 57
               

               Conread position:
               1-348
               

               Cow position:
               chr5:3582454-3582782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               321, 21
               

               Conread position:
               1-348
               

               Cow position:
               chr5:21617337-21617682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               318, 57
               

               Conread position:
               1-348
               

               Cow position:
               chr5:30629279-30628926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 86
               

               Conread position:
               1-348
               

               Cow position:
               chr5:42050430-42050771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 90
               

               Conread position:
               1-348
               

               Cow position:
               chr5:57935230-57934893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               315, 115
               

               Conread position:
               1-348
               

               Cow position:
               chr5:64321632-64321989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 45
               

               Conread position:
               1-350
               

               Cow position:
               chr5:41010114-41009781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 66
               

               Conread position:
               1-350
               

               Cow position:
               chr5:56070735-56071086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 147
               

               Conread position:
               1-351
               

               Cow position:
               chr5:991345-991704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 122
               

               Conread position:
               1-353
               

               Cow position:
               chr5:45472147-45472506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               254
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               32, 127
               

               Conread position:
               1-353
               

               Cow position:
               chr5:46512884-46512536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 112
               

               Conread position:
               1-353
               

               Cow position:
               chr5:50943271-50942928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 117
               

               Conread position:
               1-354
               

               Cow position:
               chr5:17087146-17086784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 94
               

               Conread position:
               1-354
               

               Cow position:
               chr5:55942517-55942146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 101
               

               Conread position:
               1-355
               

               Cow position:
               chr5:56524054-56524396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 62
               

               Conread position:
               1-359
               

               Cow position:
               chr5:8024316-8023976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               248
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               102, 120
               

               Conread position:
               1-360
               

               Cow position:
               chr5:11229790-11229433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 116
               

               Conread position:
               1-360
               

               Cow position:
               chr5:22666972-22667310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 55
               

               Conread position:
               1-360
               

               Cow position:
               chr5:30844992-30845342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               321, 79
               

               Conread position:
               1-360
               

               Cow position:
               chr5:56028648-56028308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               318, 78
               

               Conread position:
               1-360
               

               Cow position:
               chr5:65752735-65753103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 148
               

               Conread position:
               1-361
               

               Cow position:
               chr5:15363773-15364110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-361
               

               Cow position:
               chr5:24996344-24995980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 113
               

               Conread position:
               1-361
               

               Cow position:
               chr5:44446989-44446636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 240
               

               Conread position:
               1-361
               

               Cow position:
               chr5:45845813-45845449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 76
               

               Conread position:
               1-361
               

               Cow position:
               chr5:55967000-55966631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 56
               

               Conread position:
               1-361
               

               Cow position:
               chr5:56014613-56014961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               318, 64
               

               Conread position:
               1-365
               

               Cow position:
               chr5:21828745-21829107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 146
               

               Conread position:
               1-368
               

               Cow position:
               chr5:34561891-34562256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 148
               

               Conread position:
               1-371
               

               Cow position:
               chr5:27154902-27155252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               257
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               51, 33
               

               Conread position:
               1-371
               

               Cow position:
               chr5:65941371-65940999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 85
               

               Conread position:
               1-375
               

               Cow position:
               chr5:30276576-30276941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               319, 105
               

               Conread position:
               1-423
               

               Cow position:
               chr5:16893893-16893472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               317, 56
               

               Conread position:
               2-335
               

               Cow position:
               chr5:68718756-68719081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 21
               

               Conread position:
               2-350
               

               Cow position:
               chr5:30092747-30092399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               29, 116
               

               Conread position:
               2-361
               

               Cow position:
               chr5:45225945-45225582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               29, 156
               

               Conread position:
               3-207
               

               Cow position:
               chr5:63185369-63185172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               122, 58
               

               Conread position:
               3-214
               

               Cow position:
               chr5:35209594-35209386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               53, 36
               

               Conread position:
               3-215
               

               Cow position:
               chr5:65601341-65601547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               33, 81
               

               Conread position:
               3-236
               

               Cow position:
               chr5:52645198-52644969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               60, 51
               

               Conread position:
               3-238
               

               Cow position:
               chr5:65883895-65883659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               33, 125
               

               Conread position:
               3-268
               

               Cow position:
               chr5:37808795-37808521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               35, 91
               

               Conread position:
               3-293
               

               Cow position:
               chr5:16206274-16205986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               202, 144
               

               Conread position:
               3-319
               

               Cow position:
               chr5:64139447-64139752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 95
               

               Conread position:
               3-348
               

               Cow position:
               chr5:48143906-48143563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               46, 113
               

               Conread position:
               3-350
               

               Cow position:
               chr5:39936983-39937345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               30, 61
               

               Conread position:
               3-352
               

               Cow position:
               chr5:55955790-55956141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 26
               

               Conread position:
               3-353
               

               Cow position:
               chr5:29680960-29681326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               9, 149
               

               Conread position:
               3-353
               

               Cow position:
               chr5:66338960-66339305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               251
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               309, 100
               

               Conread position:
               3-361
               

               Cow position:
               chr5:62107610-62107245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               139, 109
               

               Conread position:
               3-361
               

               Cow position:
               chr5:72035206-72034861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               246
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               29, 48
               

               Conread position:
               3-364
               

               Cow position:
               chr5:70951995-70951651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               315, 110
               

               Conread position:
               4-164
               

               Cow position:
               chr5:8994684-8994526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               121, 34
               

               Conread position:
               4-164
               

               Cow position:
               chr5:38647240-38647394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               4-171
               

               Cow position:
               chr5:37714016-37713848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               52, 111
               

               Conread position:
               4-190
               

               Cow position:
               chr5:21964167-21964354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               33, 119
               

               Conread position:
               4-192
               

               Cow position:
               chr5:64823429-64823244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               110, 63
               

               Conread position:
               4-198
               

               Cow position:
               chr5:56820380-56820188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               4-207
               

               Cow position:
               chr5:34638766-34638966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               159
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               4-220
               

               Cow position:
               chr5:73080084-73080300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               90, 45
               

               Conread position:
               4-223
               

               Cow position:
               chr5:16508977-16509204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               4-224
               

               Cow position:
               chr5:19523779-19523999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               32, 125
               

               Conread position:
               4-228
               

               Cow position:
               chr5:9090138-9089920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               45, 56
               

               Conread position:
               4-238
               

               Cow position:
               chr5:55928824-55929057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               31, 55
               

               Conread position:
               4-238
               

               Cow position:
               chr5:62638789-62639017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               90, 115
               

               Conread position:
               4-239
               

               Cow position:
               chr5:56680129-56680370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               27, 145
               

               Conread position:
               4-239
               

               Cow position:
               chr5:57736992-57737213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               4-254
               

               Cow position:
               chr5:48009967-48009730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               86, 119
               

               Conread position:
               4-255
               

               Cow position:
               chr5:8821126-8820883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               131, 49
               

               Conread position:
               4-255
               

               Cow position:
               chr5:52000104-52000348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               4-261
               

               Cow position:
               chr5:49440990-49440734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 73
               

               Conread position:
               4-264
               

               Cow position:
               chr5:6045173-6045434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 145
               

               Conread position:
               4-265
               

               Cow position:
               chr5:7723552-7723805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               25, 49
               

               Conread position:
               4-268
               

               Cow position:
               chr5:60747394-60747138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               111, 12
               

               Conread position:
               4-272
               

               Cow position:
               chr5:72564642-72564910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               33, 63
               

               Conread position:
               4-273
               

               Cow position:
               chr5:44994156-44993902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               124, 79
               

               Conread position:
               4-274
               

               Cow position:
               chr5:54311214-54311484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               34, 126
               

               Conread position:
               4-276
               

               Cow position:
               chr5:46509984-46509714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 49
               

               Conread position:
               4-283
               

               Cow position:
               chr5:4032112-4031829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               33, 148
               

               Conread position:
               4-283
               

               Cow position:
               chr5:50533505-50533231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               126, 144
               

               Conread position:
               4-283
               

               Cow position:
               chr5:54768028-54767752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               196
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               28, 123
               

               Conread position:
               4-284
               

               Cow position:
               chr5:44726444-44726175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               202
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               4-327
               

               Cow position:
               chr5:6503998-6503670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               222
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               32, 54
               

               Conread position:
               4-330
               

               Cow position:
               chr5:35826485-35826807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               312, 90
               

               Conread position:
               4-332
               

               Cow position:
               chr5:20779504-20779188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               133, 41
               

               Conread position:
               4-332
               

               Cow position:
               chr5:54350486-54350163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               33, 65
               

               Conread position:
               4-335
               

               Cow position:
               chr5:22643336-22643033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               14, 46
               

               Conread position:
               4-335
               

               Cow position:
               chr5:45397460-45397779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 52
               

               Conread position:
               4-336
               

               Cow position:
               chr5:74003747-74003437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               39, 17
               

               Conread position:
               4-337
               

               Cow position:
               chr5:47696560-47696244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               102, 73
               

               Conread position:
               4-337
               

               Cow position:
               chr5:50599938-50600262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 57
               

               Conread position:
               4-337
               

               Cow position:
               chr5:67932582-67932250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               236, 82
               

               Conread position:
               4-348
               

               Cow position:
               chr5:9894245-9893898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 7
               

               Conread position:
               4-348
               

               Cow position:
               chr5:16179643-16179296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               33, 52
               

               Conread position:
               4-348
               

               Cow position:
               chr5:28224334-28224669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               33, 80
               

               Conread position:
               4-348
               

               Cow position:
               chr5:29903640-29903316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 112
               

               Conread position:
               4-348
               

               Cow position:
               chr5:35684820-35685160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 61
               

               Conread position:
               4-348
               

               Cow position:
               chr5:35969424-35969767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               245
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               235, 55
               

               Conread position:
               4-348
               

               Cow position:
               chr5:51053766-51053421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               239
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               175, 51
               

               Conread position:
               4-348
               

               Cow position:
               chr5:53835596-53835948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 30
               

               Conread position:
               4-350
               

               Cow position:
               chr5:44848144-44847797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               242
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               56, 127
               

               Conread position:
               4-352
               

               Cow position:
               chr5:26467505-26467858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 139
               

               Conread position:
               4-352
               

               Cow position:
               chr5:32339082-32338730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 77
               

               Conread position:
               4-352
               

               Cow position:
               chr5:66972309-66972661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               38, 131
               

               Conread position:
               4-352
               

               Cow position:
               chr5:72895570-72895919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 35
               

               Conread position:
               4-355
               

               Cow position:
               chr5:44028419-44028075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               260, 45
               

               Conread position:
               4-356
               

               Cow position:
               chr5:47871165-47870819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               29, 159
               

               Conread position:
               4-358
               

               Cow position:
               chr5:55176772-55177117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               101, 146
               

               Conread position:
               4-358
               

               Cow position:
               chr5:69047480-69047149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               41, 21
               

               Conread position:
               4-359
               

               Cow position:
               chr5:14314407-14314752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 144
               

               Conread position:
               4-360
               

               Cow position:
               chr5:7057524-7057158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               246
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               32, 109
               

               Conread position:
               4-360
               

               Cow position:
               chr5:19278818-19278464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               253
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               163, 101
               

               Conread position:
               4-360
               

               Cow position:
               chr5:47317089-47316737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               255, 124
               

               Conread position:
               4-361
               

               Cow position:
               chr5:11427356-11426995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               255
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               24, 122
               

               Conread position:
               4-361
               

               Cow position:
               chr5:19335905-19335534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               26, 147
               

               Conread position:
               4-361
               

               Cow position:
               chr5:29097241-29097605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               240
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               27, 131
               

               Conread position:
               4-361
               

               Cow position:
               chr5:49919806-49920165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               30, 19
               

               Conread position:
               4-363
               

               Cow position:
               chr5:59047-58686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               246
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               28, 46
               

               Conread position:
               4-364
               

               Cow position:
               chr5:4280343-4280687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               254
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               161, 33
               

               Conread position:
               4-364
               

               Cow position:
               chr5:30253623-30253984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 112
               

               Conread position:
               4-364
               

               Cow position:
               chr5:72951721-72952063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               258
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               20, 146
               

               Conread position:
               4-370
               

               Cow position:
               chr5:47601701-47602056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               315, 106
               

               Conread position:
               4-372
               

               Cow position:
               chr5:38833005-38833366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 73
               

               Conread position:
               5-168
               

               Cow position:
               chr5:6086675-6086517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               5-171
               

               Cow position:
               chr5:27015567-27015726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               5-174
               

               Cow position:
               chr5:60126256-60126422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               5-255
               

               Cow position:
               chr5:62142553-62142806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               37, 59
               

               Conread position:
               5-267
               

               Cow position:
               chr5:6683472-6683226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               59, 29
               

               Conread position:
               5-276
               

               Cow position:
               chr5:39258406-39258656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               26, 14
               

               Conread position:
               5-276
               

               Cow position:
               chr5:54060159-54060426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               30, 94
               

               Conread position:
               5-276
               

               Cow position:
               chr5:67243812-67244068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               107, 51
               

               Conread position:
               5-283
               

               Cow position:
               chr5:34300799-34301073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               101, 143
               

               Conread position:
               5-320
               

               Cow position:
               chr5:74580679-74580983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               5-332
               

               Cow position:
               chr5:12673579-12673269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               238
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               314, 54
               

               Conread position:
               5-337
               

               Cow position:
               chr5:65136167-65136473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               316, 23
               

               Conread position:
               5-348
               

               Cow position:
               chr5:66257522-66257861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 60
               

               Conread position:
               5-348
               

               Cow position:
               chr5:73168117-73167786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               34, 14
               

               Conread position:
               5-356
               

               Cow position:
               chr5:64176234-64175895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               316, 89
               

               Conread position:
               5-359
               

               Cow position:
               chr5:14550699-14550344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               34, 112
               

               Conread position:
               5-361
               

               Cow position:
               chr5:3242593-3242255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               304, 108
               

               Conread position:
               5-361
               

               Cow position:
               chr5:30302776-30303121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 131
               

               Conread position:
               5-361
               

               Cow position:
               chr5:33560851-33560499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               251
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               29, 117
               

               Conread position:
               5-364
               

               Cow position:
               chr5:69337712-69338053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 61
               

               Conread position:
               5-370
               

               Cow position:
               chr5:3549903-3549559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               105, 63
               

               Conread position:
               6-206
               

               Cow position:
               chr5:42744672-42744867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               132, 79
               

               Conread position:
               6-239
               

               Cow position:
               chr5:65588587-65588813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               122, 80
               

               Conread position:
               6-274
               

               Cow position:
               chr5:36855088-36855354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               31, 109
               

               Conread position:
               6-348
               

               Cow position:
               chr5:26990276-26990613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               146, 110
               

               Conread position:
               6-356
               

               Cow position:
               chr5:7044823-7044472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 111
               

               Conread position:
               6-361
               

               Cow position:
               chr5:57074450-57074098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 79
               

               Conread position:
               6-361
               

               Cow position:
               chr5:64027124-64026770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 111
               

               Conread position:
               6-361
               

               Cow position:
               chr5:66581847-66582208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               29, 103
               

               Conread position:
               6-362
               

               Cow position:
               chr5:4220868-4221207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               7-174
               

               Cow position:
               chr5:62826869-62826703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               41, 53
               

               Conread position:
               7-255
               

               Cow position:
               chr5:27172095-27171863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               7-259
               

               Cow position:
               chr5:56518325-56518087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               184, 101
               

               Conread position:
               7-263
               

               Cow position:
               chr5:20783509-20783759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               194, 73
               

               Conread position:
               7-265
               

               Cow position:
               chr5:41452779-41452533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               125, 39
               

               Conread position:
               7-283
               

               Cow position:
               chr5:64592207-64591938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               105, 8
               

               Conread position:
               7-284
               

               Cow position:
               chr5:43992206-43992482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               36, 130
               

               Conread position:
               7-331
               

               Cow position:
               chr5:15722181-15721878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               234
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               313, 107
               

               Conread position:
               7-356
               

               Cow position:
               chr5:74643786-74643449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               312, 101
               

               Conread position:
               7-367
               

               Cow position:
               chr5:72903347-72902994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               30, 112
               

               Conread position:
               7-372
               

               Cow position:
               chr5:12901800-12902169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               254
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               30, 125
               

               Conread position:
               8-256
               

               Cow position:
               chr5:15598347-15598107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               106, 78
               

               Conread position:
               8-276
               

               Cow position:
               chr5:45574501-45574770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               110, 138
               

               Conread position:
               8-310
               

               Cow position:
               chr5:7193317-7193599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               8-332
               

               Cow position:
               chr5:29353242-29352921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               104, 41
               

               Conread position:
               8-335
               

               Cow position:
               chr5:57327682-57328011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               24, 104
               

               Conread position:
               8-351
               

               Cow position:
               chr5:52165293-52164943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               248
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               29, 107
               

               Conread position:
               8-352
               

               Cow position:
               chr5:25495465-25495120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               251
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               60, 104
               

               Conread position:
               8-352
               

               Cow position:
               chr5:41164974-41165314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               313, 11
               

               Conread position:
               8-359
               

               Cow position:
               chr5:35763161-35763482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               8-361
               

               Cow position:
               chr5:11668300-11667944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               249
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               34, 47
               

               Conread position:
               8-361
               

               Cow position:
               chr5:49474659-49474316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 47
               

               Conread position:
               9-197
               

               Cow position:
               chr5:6670307-6670121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               119, 60
               

               Conread position:
               9-254
               

               Cow position:
               chr5:13717684-13717441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               28, 103
               

               Conread position:
               9-261
               

               Cow position:
               chr5:15426416-15426675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               111, 135
               

               Conread position:
               9-276
               

               Cow position:
               chr5:60599298-60599051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               26, 39
               

               Conread position:
               12-171
               

               Cow position:
               chr5:55849853-55849698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               12-246
               

               Cow position:
               chr5:58793724-58793486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               33, 140
               

               Conread position:
               12-264
               

               Cow position:
               chr5:17027987-17028235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               36, 23
               

               Conread position:
               12-264
               

               Cow position:
               chr5:20422294-20422055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               12-276
               

               Cow position:
               chr5:7697895-7698150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               191
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               12-277
               

               Cow position:
               chr5:58446693-58446957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               37, 48
               

               Conread position:
               12-320
               

               Cow position:
               chr5:57419903-57419600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               14, 76
               

               Conread position:
               12-331
               

               Cow position:
               chr5:60183691-60184008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 135
               

               Conread position:
               12-332
               

               Cow position:
               chr5:37645964-37646286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               107, 82
               

               Conread position:
               12-332
               

               Cow position:
               chr5:71846034-71845715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 108
               

               Conread position:
               12-335
               

               Cow position:
               chr5:53946783-53947113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               10, 115
               

               Conread position:
               12-347
               

               Cow position:
               chr5:60016057-60016389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 104
               

               Conread position:
               12-348
               

               Cow position:
               chr5:42670966-42670646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               248
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               151, 27
               

               Conread position:
               12-358
               

               Cow position:
               chr5:39447640-39447288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               238, 43
               

               Conread position:
               13-279
               

               Cow position:
               chr5:35125945-35126208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               13-345
               

               Cow position:
               chr5:14921039-14920702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 73
               

               Conread position:
               13-361
               

               Cow position:
               chr5:63647584-63647240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               237
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               19, 106
               

               Conread position:
               14-130
               

               Cow position:
               chr5:4797424-4797307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               14-361
               

               Cow position:
               chr5:12434427-12434773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 55
               

               Conread position:
               14-362
               

               Cow position:
               chr5:17999603-17999254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 103
               

               Conread position:
               16-222
               

               Cow position:
               chr5:69520787-69520988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               87, 54
               

               Conread position:
               16-255
               

               Cow position:
               chr5:64758878-64758637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               15, 132
               

               Conread position:
               16-276
               

               Cow position:
               chr5:41293974-41294231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               21, 111
               

               Conread position:
               16-356
               

               Cow position:
               chr5:31475575-31475919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               16, 106
               

               Conread position:
               16-361
               

               Cow position:
               chr5:17063196-17062844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               118, 98
               

               Conread position:
               16-361
               

               Cow position:
               chr5:52667924-52668278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               16, 185
               

               Conread position:
               16-369
               

               Cow position:
               chr5:19778686-19778318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               239
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               21, 110
               

               Conread position:
               18-359
               

               Cow position:
               chr5:36039108-36038767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 53
               

               Conread position:
               19-276
               

               Cow position:
               chr5:54375610-54375352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 105
               

               Conread position:
               19-347
               

               Cow position:
               chr5:55232898-55232598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               239
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               19-361
               

               Cow position:
               chr5:57768086-57767749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               238
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               23, 96
               

               Conread position:
               19-364
               

               Cow position:
               chr5:12557395-12557044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 129
               

               Conread position:
               20-336
               

               Cow position:
               chr5:64523969-64523649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               86, 77
               

               Conread position:
               22-273
               

               Cow position:
               chr5:69731407-69731647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 61
               

               Conread position:
               22-354
               

               Cow position:
               chr5:34976946-34976606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               9, 97
               

               Conread position:
               23-352
               

               Cow position:
               chr5:56548479-56548797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               53, 92
               

               Conread position:
               23-360
               

               Cow position:
               chr5:22242873-22242536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 52
               

               Conread position:
               24-289
               

               Cow position:
               chr5:62378693-62378939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               24-340
               

               Cow position:
               chr5:17555126-17554816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 15
               

               Conread position:
               25-346
               

               Cow position:
               chr5:30232802-30233135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               241
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               38, 129
               

               Conread position:
               25-347
               

               Cow position:
               chr5:33833948-33834266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               252, 10
               

               Conread position:
               25-365
               

               Cow position:
               chr5:46681812-46681480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               10, 32
               

               Conread position:
               30-277
               

               Cow position:
               chr5:49685362-49685126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               30-346
               

               Cow position:
               chr5:35976429-35976719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               287, 53
               

               Conread position:
               30-360
               

               Cow position:
               chr5:43390940-43391264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               73, 26
               

               Conread position:
               31-359
               

               Cow position:
               chr5:25366000-25366337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               83, 216
               

               Conread position:
               34-359
               

               Cow position:
               chr5:28302835-28302521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 52
               

               Conread position:
               36-361
               

               Cow position:
               chr5:61771028-61771361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               219
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               132, 72
               

               Conread position:
               41-352
               

               Cow position:
               chr5:32394520-32394833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               147, 46
               

               Conread position:
               41-358
               

               Cow position:
               chr5:43402819-43403146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 109
               

               Conread position:
               42-251
               

               Cow position:
               chr5:31640340-31640551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               52, 108
               

               Conread position:
               46-358
               

               Cow position:
               chr5:49668402-49668723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               101, 80
               

               Conread position:
               52-276
               

               Cow position:
               chr5:29912349-29912571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               140, 25
               

               Conread position:
               52-335
               

               Cow position:
               chr5:63234896-63234609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               221, 95
               

               Conread position:
               53-349
               

               Cow position:
               chr5:43604074-43604367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               219, 50
               

               Conread position:
               57-335
               

               Cow position:
               chr5:42845662-42845383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               56, 92
               

               Conread position:
               58-238
               

               Cow position:
               chr5:28035677-28035856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               48, 90
               

               Conread position:
               58-361
               

               Cow position:
               chr5:1247199-1247502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               71, 90
               

               Conread position:
               58-370
               

               Cow position:
               chr5:7012912-7012602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               223, 69
               

               Conread position:
               59-238
               

               Cow position:
               chr5:23529343-23529169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               67, 49
               

               Conread position:
               59-255
               

               Cow position:
               chr5:1461024-1461219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               47, 62
               

               Conread position:
               59-265
               

               Cow position:
               chr5:69636172-69636363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               59-273
               

               Cow position:
               chr5:458428-458635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               59-273
               

               Cow position:
               chr5:67212293-67212507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               47, 91
               

               Conread position:
               59-335
               

               Cow position:
               chr5:66551962-66551678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               124, 88
               

               Conread position:
               59-343
               

               Cow position:
               chr5:30805105-30805371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               59-349
               

               Cow position:
               chr5:61914507-61914799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               176, 71
               

               Conread position:
               59-351
               

               Cow position:
               chr5:41935720-41935425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               18, 70
               

               Conread position:
               59-356
               

               Cow position:
               chr5:59627037-59626736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 89
               

               Conread position:
               59-359
               

               Cow position:
               chr5:57526981-57526688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               211, 55
               

               Conread position:
               59-364
               

               Cow position:
               chr5:3771785-3772088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               258, 88
               

               Conread position:
               60-359
               

               Cow position:
               chr5:42064141-42064445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               220, 87
               

               Conread position:
               60-361
               

               Cow position:
               chr5:50575723-50576005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               261, 54
               

               Conread position:
               61-320
               

               Cow position:
               chr5:61455784-61456039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               79, 87
               

               Conread position:
               62-355
               

               Cow position:
               chr5:33032113-33032403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               188, 52
               

               Conread position:
               62-361
               

               Cow position:
               chr5:59395597-59395909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               105, 51
               

               Conread position:
               63-348
               

               Cow position:
               chr5:63627584-63627313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               194, 34
               

               Conread position:
               63-361
               

               Cow position:
               chr5:6439092-6438789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               67, 23
               

               Conread position:
               64-352
               

               Cow position:
               chr5:70270801-70271098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               55, 94
               

               Conread position:
               65-284
               

               Cow position:
               chr5:40241985-40242202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               48, 84
               

               Conread position:
               65-348
               

               Cow position:
               chr5:34624900-34625175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               49, 62
               

               Conread position:
               66-276
               

               Cow position:
               chr5:56339074-56338871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               67-348
               

               Cow position:
               chr5:43923213-43922943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               39, 84
               

               Conread position:
               69-255
               

               Cow position:
               chr5:24136660-24136844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               44, 59
               

               Conread position:
               69-330
               

               Cow position:
               chr5:66466265-66466522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               188, 54
               

               Conread position:
               73-293
               

               Cow position:
               chr5:67118369-67118587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               74-359
               

               Cow position:
               chr5:45404993-45405285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               95, 41
               

               Conread position:
               76-361
               

               Cow position:
               chr5:63192788-63192513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               212
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               243, 71
               

               Conread position:
               77-265
               

               Cow position:
               chr5:56517057-56517243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               38, 51
               

               Conread position:
               78-332
               

               Cow position:
               chr5:72006537-72006286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 67
               

               Conread position:
               79-346
               

               Cow position:
               chr5:69099675-69099944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 70
               

               Conread position:
               81-260
               

               Cow position:
               chr5:56211860-56212040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               33, 68
               

               Conread position:
               81-314
               

               Cow position:
               chr5:17602242-17602015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               204, 43
               

               Conread position:
               81-360
               

               Cow position:
               chr5:49342090-49341794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               224
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               49, 17
               

               Conread position:
               82-282
               

               Cow position:
               chr5:35982781-35982583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               51, 68
               

               Conread position:
               82-346
               

               Cow position:
               chr5:68537707-68537439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               184, 65
               

               Conread position:
               82-348
               

               Cow position:
               chr5:31052345-31052615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               141, 34
               

               Conread position:
               82-350
               

               Cow position:
               chr5:66530877-66531143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               172, 70
               

               Conread position:
               82-382
               

               Cow position:
               chr5:73253374-73253665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               7, 24
               

               Conread position:
               83-298
               

               Cow position:
               chr5:61102675-61102888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               90, 33
               

               Conread position:
               83-342
               

               Cow position:
               chr5:71724261-71724507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               80, 66
               

               Conread position:
               83-347
               

               Cow position:
               chr5:20288303-20288033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 33
               

               Conread position:
               83-361
               

               Cow position:
               chr5:57101565-57101286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               51, 32
               

               Conread position:
               87-332
               

               Cow position:
               chr5:51065496-51065726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               232, 28
               

               Conread position:
               87-348
               

               Cow position:
               chr5:22795178-22795433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               45, 64
               

               Conread position:
               87-361
               

               Cow position:
               chr5:30247555-30247287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               232, 27
               

               Conread position:
               87-363
               

               Cow position:
               chr5:54875735-54875451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               75, 28
               

               Conread position:
               87-367
               

               Cow position:
               chr5:57686776-57686499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               35, 64
               

               Conread position:
               88-319
               

               Cow position:
               chr5:49501859-49501623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               181, 35
               

               Conread position:
               88-361
               

               Cow position:
               chr5:62811789-62812067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               182, 19
               

               Conread position:
               89-360
               

               Cow position:
               chr5:8736323-8736039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               79, 59
               

               Conread position:
               89-363
               

               Cow position:
               chr5:26549175-26548903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 60
               

               Conread position:
               90-318
               

               Cow position:
               chr5:56334541-56334326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               7, 23
               

               Conread position:
               97-337
               

               Cow position:
               chr5:61007040-61007280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               186, 29
               

               Conread position:
               99-342
               

               Cow position:
               chr5:29460186-29460422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               144, 22
               

               Conread position:
               100-347
               

               Cow position:
               chr5:45187142-45186889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               28, 48
               

               Conread position:
               106-282
               

               Cow position:
               chr5:9234005-9233832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               106-308
               

               Cow position:
               chr5:60668681-60668882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               10, 28
               

               Conread position:
               107-378
               

               Cow position:
               chr5:22608625-22608895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               9, 47
               

               Conread position:
               112-348
               

               Cow position:
               chr5:46541067-46540833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               64, 37
               

               Conread position:
               112-359
               

               Cow position:
               chr5:59627088-59627329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               112-361
               

               Cow position:
               chr5:34915064-34914812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               202, 12
               

               Conread position:
               114-333
               

               Cow position:
               chr5:16939606-16939380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               22, 41
               

               Conread position:
               114-358
               

               Cow position:
               chr5:39035770-39036019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               152, 32
               

               Conread position:
               115-283
               

               Cow position:
               chr5:24069381-24069544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               115-343
               

               Cow position:
               chr5:4267661-4267882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               204, 32
               

               Conread position:
               115-343
               

               Cow position:
               chr5:69383246-69383473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               175
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               204, 32
               

               Conread position:
               117-360
               

               Cow position:
               chr5:40241739-40241972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               206, 30
               

               Conread position:
               118-279
               

               Cow position:
               chr5:9170586-9170431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               118-367
               

               Cow position:
               chr5:50824586-50824832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               201, 31
               

               Conread position:
               121-358
               

               Cow position:
               chr5:5017371-5017605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               50, 23
               

               Conread position:
               121-363
               

               Cow position:
               chr5:56060073-56059822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               102, 33
               

               Conread position:
               123-325
               

               Cow position:
               chr5:38168893-38169094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               126-343
               

               Cow position:
               chr5:60523735-60523949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               21, 60
               

               Conread position:
               127-362
               

               Cow position:
               chr5:61049335-61049575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               156, 30
               

               Conread position:
               128-276
               

               Cow position:
               chr5:44874197-44874342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               128-322
               

               Cow position:
               chr5:17605130-17604938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               113, 21
               

               Conread position:
               130-351
               

               Cow position:
               chr5:51298706-51298485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               133, 19
               

               Conread position:
               131-252
               

               Cow position:
               chr5:12169761-12169642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               132-359
               

               Cow position:
               chr5:58519408-58519178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               138, 25
               

               Conread position:
               135-276
               

               Cow position:
               chr5:35647354-35647493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               135-349
               

               Cow position:
               chr5:36142998-36143206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               22, 28
               

               Conread position:
               135-352
               

               Cow position:
               chr5:60515017-60514794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               146, 12
               

               Conread position:
               136-327
               

               Cow position:
               chr5:46704287-46704094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               181, 10
               

               Conread position:
               137-332
               

               Cow position:
               chr5:12351794-12351601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               185, 12
               

               Conread position:
               137-342
               

               Cow position:
               chr5:72045661-72045456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               131, 10
               

               Conread position:
               137-343
               

               Cow position:
               chr5:44722500-44722291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               125, 75
               

               Conread position:
               137-343
               

               Cow position:
               chr5:71788706-71788915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               91, 12
               

               Conread position:
               137-347
               

               Cow position:
               chr5:30561945-30562154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               183, 12
               

               Conread position:
               137-348
               

               Cow position:
               chr5:57062516-57062301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               103, 12
               

               Conread position:
               137-357
               

               Cow position:
               chr5:5016442-5016660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               182, 12
               

               Conread position:
               137-357
               

               Cow position:
               chr5:52852984-52853203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               182, 10
               

               Conread position:
               137-359
               

               Cow position:
               chr5:2240976-2240752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               145, 10
               

               Conread position:
               137-363
               

               Cow position:
               chr5:51247118-51246892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               81, 9
               

               Conread position:
               137-369
               

               Cow position:
               chr5:75228186-75227965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               182, 10
               

               Conread position:
               139-360
               

               Cow position:
               chr5:65552696-65552483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               180, 8
               

               Conread position:
               139-363
               

               Cow position:
               chr5:26147606-26147829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               176
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               132, 10
               

               Conread position:
               140-348
               

               Cow position:
               chr5:26167437-26167646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               128, 9
               

               Conread position:
               142-348
               

               Cow position:
               chr5:54312619-54312826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               138, 5
               

               Conread position:
               143-366
               

               Cow position:
               chr5:19079271-19079487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               176, 6
               

               Conread position:
               149-332
               

               Cow position:
               chr5:38040540-38040357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               173, 92
               

               Conread position:
               149-348
               

               Cow position:
               chr5:75760250-75760041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               100, 40
               

               Conread position:
               149-359
               

               Cow position:
               chr5:35190134-35190342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               169
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               170, 98
               

               Conread position:
               149-361
               

               Cow position:
               chr5:37842255-37842040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               99, 112
               

               Conread position:
               151-357
               

               Cow position:
               chr5:11303139-11303339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               168, 17
               

               Conread position:
               151-361
               

               Cow position:
               chr5:34288224-34288013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 39
               

               Conread position:
               153-352
               

               Cow position:
               chr5:1694060-1693862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               167, 105
               

               Conread position:
               154-367
               

               Cow position:
               chr5:36822916-36823115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               154-447
               

               Cow position:
               chr5:6086314-6086018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               22, 210
               

               Conread position:
               155-366
               

               Cow position:
               chr5:54340793-54341010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               23, 203
               

               Conread position:
               156-361
               

               Cow position:
               chr5:15991608-15991406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               161, 84
               

               Conread position:
               156-412
               

               Cow position:
               chr5:61580313-61580571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               84, 20
               

               Conread position:
               157-356
               

               Cow position:
               chr5:60153806-60154002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               15, 84
               

               Conread position:
               157-371
               

               Cow position:
               chr5:60100501-60100714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               15, 84
               

               Conread position:
               159-347
               

               Cow position:
               chr5:62995991-62996185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               116, 82
               

               Conread position:
               160-361
               

               Cow position:
               chr5:3817652-3817447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               161-347
               

               Cow position:
               chr5:57497388-57497200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               156, 86
               

               Conread position:
               162-359
               

               Cow position:
               chr5:12562723-12562523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 87
               

               Conread position:
               163-367
               

               Cow position:
               chr5:35394395-35394191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               156, 84
               

               Conread position:
               164-348
               

               Cow position:
               chr5:29599508-29599325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               11, 75
               

               Conread position:
               164-361
               

               Cow position:
               chr5:41736221-41736422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               91, 76
               

               Conread position:
               165-346
               

               Cow position:
               chr5:70591594-70591767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               167-346
               

               Cow position:
               chr5:6876926-6876740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               167-371
               

               Cow position:
               chr5:39815459-39815250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               96, 64
               

               Conread position:
               170-356
               

               Cow position:
               chr5:46479194-46479012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               170-359
               

               Cow position:
               chr5:56327676-56327488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 33
               

               Conread position:
               170-363
               

               Cow position:
               chr5:31648465-31648660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               150, 25
               

               Conread position:
               171-361
               

               Cow position:
               chr5:56525666-56525470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               101, 70
               

               Conread position:
               172-274
               

               Cow position:
               chr5:57785556-57785658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               92, 75
               

               Conread position:
               174-348
               

               Cow position:
               chr5:4824197-4824380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               175-348
               

               Cow position:
               chr5:29895221-29895398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               176-347
               

               Cow position:
               chr5:67339934-67340107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               146, 82
               

               Conread position:
               176-366
               

               Cow position:
               chr5:60207759-60207949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               143, 81
               

               Conread position:
               177-350
               

               Cow position:
               chr5:37253481-37253652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               141, 81
               

               Conread position:
               177-361
               

               Cow position:
               chr5:34918398-34918585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               142, 70
               

               Conread position:
               178-347
               

               Cow position:
               chr5:49207274-49207103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               140, 69
               

               Conread position:
               178-359
               

               Cow position:
               chr5:52192376-52192202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               180-361
               

               Cow position:
               chr5:52849140-52849321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               141, 78
               

               Conread position:
               181-360
               

               Cow position:
               chr5:19968303-19968120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               105, 66
               

               Conread position:
               182-342
               

               Cow position:
               chr5:9559478-9559634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               137, 75
               

               Conread position:
               182-347
               

               Cow position:
               chr5:75478858-75478692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               74, 59
               

               Conread position:
               183-358
               

               Cow position:
               chr5:21721412-21721240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               148
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               185-348
               

               Cow position:
               chr5:63300138-63300305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               72, 90
               

               Conread position:
               185-358
               

               Cow position:
               chr5:34787634-34787809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               130, 73
               

               Conread position:
               185-361
               

               Cow position:
               chr5:66287005-66287180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               83, 72
               

               Conread position:
               187-361
               

               Cow position:
               chr5:57447604-57447426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               97, 54
               

               Conread position:
               189-366
               

               Cow position:
               chr5:32975822-32976009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               190-353
               

               Cow position:
               chr5:6245598-6245433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               125, 68
               

               Conread position:
               196-361
               

               Cow position:
               chr5:55783892-55783724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               62, 44
               

               Conread position:
               199-361
               

               Cow position:
               chr5:19626652-19626812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               120, 59
               

               Conread position:
               199-367
               

               Cow position:
               chr5:58487449-58487618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               123, 42
               

               Conread position:
               202-365
               

               Cow position:
               chr5:17537596-17537435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               118, 45
               

               Conread position:
               209-362
               

               Cow position:
               chr5:48104345-48104501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               211-369
               

               Cow position:
               chr5:74049910-74050070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               75, 47
               

               Conread position:
               228-361
               

               Cow position:
               chr5:20736774-20736637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               89, 43
               

               Conread position:
               234-359
               

               Cow position:
               chr5:63940339-63940216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               250-366
               

               Cow position:
               chr5:8149183-8149064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               258-361
               

               Cow position:
               chr5:69356985-69357090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               58, 95
               
Show alignments to all cow chromosomes.
Conread position:	1-158
Cow position:	chr5:34288589-34288435 (view UCSC Genome Browser custom track)
Alignm length:	159
Alignm identity:	122
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	128, 22
Conread position:	1-167
Cow position:	chr5:34916018-34916173 (view UCSC Genome Browser custom track)
Alignm length:	167
Alignm identity:	126
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	93, 0
Conread position:	1-181
Cow position:	chr5:3627274-3627096 (view UCSC Genome Browser custom track)
Alignm length:	182
Alignm identity:	141
Alignm E-value:	7e-35
Alignm gaps (pig, cow):	39, 125
Conread position:	1-183
Cow position:	chr5:43474726-43474904 (view UCSC Genome Browser custom track)
Alignm length:	184
Alignm identity:	130
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	166, 113
Conread position:	1-203
Cow position:	chr5:50799419-50799612 (view UCSC Genome Browser custom track)
Alignm length:	203
Alignm identity:	144
Alignm E-value:	7e-25
Alignm gaps (pig, cow):	86, 0
Conread position:	1-222
Cow position:	chr5:67540324-67540104 (view UCSC Genome Browser custom track)
Alignm length:	226
Alignm identity:	156
Alignm E-value:	7e-25
Alignm gaps (pig, cow):	133, 87
Conread position:	1-223
Cow position:	chr5:63865674-63865893 (view UCSC Genome Browser custom track)
Alignm length:	224
Alignm identity:	167
Alignm E-value:	4e-39
Alignm gaps (pig, cow):	123, 148
Conread position:	1-237
Cow position:	chr5:46425972-46425743 (view UCSC Genome Browser custom track)
Alignm length:	239
Alignm identity:	174
Alignm E-value:	6e-34
Alignm gaps (pig, cow):	109, 82
Conread position:	1-239
Cow position:	chr5:20407788-20407564 (view UCSC Genome Browser custom track)
Alignm length:	239
Alignm identity:	179
Alignm E-value:	1e-39
Alignm gaps (pig, cow):	81, 0
Conread position:	1-251
Cow position:	chr5:57626685-57626914 (view UCSC Genome Browser custom track)
Alignm length:	251
Alignm identity:	173
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	55, 0
Conread position:	1-255
Cow position:	chr5:37814503-37814756 (view UCSC Genome Browser custom track)
Alignm length:	256
Alignm identity:	154
Alignm E-value:	3e-36
Alignm gaps (pig, cow):	95, 7
Conread position:	1-256
Cow position:	chr5:19813336-19813089 (view UCSC Genome Browser custom track)
Alignm length:	258
Alignm identity:	180
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	105, 55
Conread position:	1-260
Cow position:	chr5:45803942-45804194 (view UCSC Genome Browser custom track)
Alignm length:	261
Alignm identity:	191
Alignm E-value:	4.00001e-41
Alignm gaps (pig, cow):	137, 54
Conread position:	1-261
Cow position:	chr5:57575648-57575909 (view UCSC Genome Browser custom track)
Alignm length:	264
Alignm identity:	195
Alignm E-value:	0
Alignm gaps (pig, cow):	127, 107
Conread position:	1-264
Cow position:	chr5:14629934-14629666 (view UCSC Genome Browser custom track)
Alignm length:	270
Alignm identity:	193
Alignm E-value:	4.00001e-41
Alignm gaps (pig, cow):	131, 147
Conread position:	1-265
Cow position:	chr5:74015819-74016079 (view UCSC Genome Browser custom track)
Alignm length:	265
Alignm identity:	188
Alignm E-value:	4.00001e-40
Alignm gaps (pig, cow):	144, 0
Conread position:	1-268
Cow position:	chr5:30950037-30949773 (view UCSC Genome Browser custom track)
Alignm length:	268
Alignm identity:	195
Alignm E-value:	0
Alignm gaps (pig, cow):	86, 0
Conread position:	1-275
Cow position:	chr5:56317177-56317438 (view UCSC Genome Browser custom track)
Alignm length:	275
Alignm identity:	190
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	53, 0
Conread position:	1-276
Cow position:	chr5:25231125-25230867 (view UCSC Genome Browser custom track)
Alignm length:	277
Alignm identity:	192
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	261, 55
Conread position:	1-284
Cow position:	chr5:4166541-4166802 (view UCSC Genome Browser custom track)
Alignm length:	287
Alignm identity:	202
Alignm E-value:	9e-27
Alignm gaps (pig, cow):	247, 37