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Cow genome map

           
Conread name:
           
Ova1-OVRM10125H10
        

               
Conread position:
               
1-111
               

               
Cow position:
               
chr6:2012912-2013022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr6:34031556-34031721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr6:6460436-6460605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr6:18961623-18961442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr6:415991-416187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 128
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr6:37376624-37376433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
128, 149
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr6:21542213-21542406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
124, 115
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr6:24962042-24962237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
169, 48
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr6:130268-130043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
97, 74
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr6:23248066-23247839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
127, 55
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr6:61608404-61608639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr6:35613521-35613272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
161, 43
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr6:47640540-47640283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 126
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr6:9452876-9452617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
110, 78
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr6:54991107-54990842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 17
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr6:53651936-53652203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr6:37199642-37199352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 154
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr6:20098071-20097764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
118, 151
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr6:57571370-57571679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 116
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr6:5114152-5113823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
255, 81
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr6:54132710-54133038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 55
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr6:38853761-38853428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 52
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr6:49398721-49398401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 115
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr6:21061999-21061662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 154
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr6:39358450-39358114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 35
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr6:24031272-24031598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
109, 72
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr6:38207598-38207250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 96
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr6:50577417-50577754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 107
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr6:63252030-63251682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
38, 115
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr6:31535674-31535333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 48
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr6:65870921-65871271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 155
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr6:15305474-15305813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 80
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr6:8637168-8637513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 147
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr6:29484983-29485330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 68
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr6:4383379-4383721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 107
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr6:10106099-10105738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 159
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr6:59603314-59602965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 47
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr6:8965986-8966345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 38
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr6:13040350-13040705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
247, 48
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr6:24468500-24468147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 116
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr6:26728632-26728291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 77
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr6:31847327-31846991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
34, 23
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr6:38640124-38640485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 146
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr6:47574798-47575143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 115
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr6:47799185-47799457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
35, 114
               

               
Conread position:
               
2-281
               

               
Cow position:
               
chr6:4692086-4691807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
40, 148
               

               
Conread position:
               
2-358
               

               
Cow position:
               
chr6:19695699-19696055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
2-361
               

               
Cow position:
               
chr6:51526385-51526743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 113
               

               
Conread position:
               
2-367
               

               
Cow position:
               
chr6:58370647-58371005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
35, 148
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr6:8318269-8318093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
53, 113
               

               
Conread position:
               
3-262
               

               
Cow position:
               
chr6:60667313-60667561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
29, 116
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr6:24004438-24004690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-276
               

               
Cow position:
               
chr6:59069729-59069456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
103, 79
               

               
Conread position:
               
3-283
               

               
Cow position:
               
chr6:58597609-58597337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 74
               

               
Conread position:
               
3-289
               

               
Cow position:
               
chr6:36652314-36652598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
123, 111
               

               
Conread position:
               
3-320
               

               
Cow position:
               
chr6:8125223-8125538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
51, 32
               

               
Conread position:
               
3-332
               

               
Cow position:
               
chr6:51835292-51835622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
28, 149
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr6:32121806-32122135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 78
               

               
Conread position:
               
3-352
               

               
Cow position:
               
chr6:46465718-46466061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 110
               

               
Conread position:
               
3-356
               

               
Cow position:
               
chr6:44078413-44078763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
251, 56
               

               
Conread position:
               
3-357
               

               
Cow position:
               
chr6:35415625-35415268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
34, 114
               

               
Conread position:
               
3-359
               

               
Cow position:
               
chr6:23695889-23696244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 148
               

               
Conread position:
               
3-361
               

               
Cow position:
               
chr6:17414553-17414198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 56
               

               
Conread position:
               
4-176
               

               
Cow position:
               
chr6:61137271-61137440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
4-191
               

               
Cow position:
               
chr6:49410795-49410617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
4-202
               

               
Cow position:
               
chr6:12829327-12829134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
104, 13
               

               
Conread position:
               
4-215
               

               
Cow position:
               
chr6:16266615-16266828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
32, 105
               

               
Conread position:
               
4-233
               

               
Cow position:
               
chr6:57164322-57164551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 120
               

               
Conread position:
               
4-234
               

               
Cow position:
               
chr6:54208243-54208012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
32, 21
               

               
Conread position:
               
4-236
               

               
Cow position:
               
chr6:12543037-12542805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
103, 144
               

               
Conread position:
               
4-238
               

               
Cow position:
               
chr6:899394-899166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
4-238
               

               
Cow position:
               
chr6:8788142-8787910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
38, 95
               

               
Conread position:
               
4-238
               

               
Cow position:
               
chr6:31635793-31635557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
117, 31
               

               
Conread position:
               
4-255
               

               
Cow position:
               
chr6:60350399-60350148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 144
               

               
Conread position:
               
4-256
               

               
Cow position:
               
chr6:4864652-4864402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
4-256
               

               
Cow position:
               
chr6:14958449-14958195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
4-265
               

               
Cow position:
               
chr6:9026413-9026673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 180
               

               
Conread position:
               
4-265
               

               
Cow position:
               
chr6:58590174-58590426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
61, 31
               

               
Conread position:
               
4-267
               

               
Cow position:
               
chr6:12551166-12551427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 51
               

               
Conread position:
               
4-268
               

               
Cow position:
               
chr6:54573139-54573416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
4-268
               

               
Cow position:
               
chr6:66874247-66874506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
4-269
               

               
Cow position:
               
chr6:31564442-31564180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
132, 31
               

               
Conread position:
               
4-275
               

               
Cow position:
               
chr6:47339456-47339191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
108, 38
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr6:582375-582109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr6:66531925-66531658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
4-279
               

               
Cow position:
               
chr6:54867409-54867684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
28, 145
               

               
Conread position:
               
4-282
               

               
Cow position:
               
chr6:18049134-18048852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
49, 128
               

               
Conread position:
               
4-303
               

               
Cow position:
               
chr6:40713605-40713317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 112
               

               
Conread position:
               
4-320
               

               
Cow position:
               
chr6:35842546-35842869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 151
               

               
Conread position:
               
4-320
               

               
Cow position:
               
chr6:52412754-52413071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 105
               

               
Conread position:
               
4-330
               

               
Cow position:
               
chr6:60739911-60740232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
29, 105
               

               
Conread position:
               
4-332
               

               
Cow position:
               
chr6:12337880-12338214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 150
               

               
Conread position:
               
4-332
               

               
Cow position:
               
chr6:29000029-28999733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
186, 42
               

               
Conread position:
               
4-332
               

               
Cow position:
               
chr6:47305235-47305566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
27, 82
               

               
Conread position:
               
4-336
               

               
Cow position:
               
chr6:34196254-34195934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
150, 110
               

               
Conread position:
               
4-337
               

               
Cow position:
               
chr6:7119714-7119401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
110, 45
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr6:36470672-36470343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
33, 126
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr6:48803741-48803405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 58
               

               
Conread position:
               
4-344
               

               
Cow position:
               
chr6:19401752-19402081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr6:67950849-67951194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
124, 61
               

               
Conread position:
               
4-346
               

               
Cow position:
               
chr6:611458-611782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
135, 37
               

               
Conread position:
               
4-347
               

               
Cow position:
               
chr6:53460676-53460332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 148
               

               
Conread position:
               
4-347
               

               
Cow position:
               
chr6:55282390-55282053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 13
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr6:7130984-7130621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
126, 51
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr6:7190223-7189889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
27, 14
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr6:11192570-11192240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 35
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr6:17090495-17090820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
119, 109
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr6:36202724-36203061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 52
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr6:37149084-37149422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
33, 5
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr6:46283104-46282752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
119, 51
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr6:61631713-61631368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
32, 104
               

               
Conread position:
               
4-350
               

               
Cow position:
               
chr6:40032089-40032422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
126, 76
               

               
Conread position:
               
4-350
               

               
Cow position:
               
chr6:43345550-43345197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
30, 106
               

               
Conread position:
               
4-352
               

               
Cow position:
               
chr6:8562616-8562959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
244, 143
               

               
Conread position:
               
4-352
               

               
Cow position:
               
chr6:17557277-17557619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 109
               

               
Conread position:
               
4-352
               

               
Cow position:
               
chr6:18447612-18447271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
266, 32
               

               
Conread position:
               
4-352
               

               
Cow position:
               
chr6:25615206-25614846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 11
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr6:120139-120485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 31
               

               
Conread position:
               
4-358
               

               
Cow position:
               
chr6:5609544-5609192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 47
               

               
Conread position:
               
4-359
               

               
Cow position:
               
chr6:2547142-2547511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 69
               

               
Conread position:
               
4-359
               

               
Cow position:
               
chr6:64431835-64432184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
102, 35
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr6:19996514-19996866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
33, 69
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr6:9219169-9219516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
195, 104
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr6:10176406-10176043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
7, 116
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr6:11246659-11247023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
124, 144
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr6:17313630-17313992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
103, 88
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr6:22850349-22849999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
28, 68
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr6:29210395-29210729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
172, 10
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr6:50984121-50984472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
27, 81
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr6:59718692-59719067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
102, 134
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr6:62371285-62370935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
27, 123
               

               
Conread position:
               
4-362
               

               
Cow position:
               
chr6:9008715-9008372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
315, 118
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr6:61168671-61169015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
244, 52
               

               
Conread position:
               
4-364
               

               
Cow position:
               
chr6:15447308-15446939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
10, 147
               

               
Conread position:
               
4-370
               

               
Cow position:
               
chr6:10225743-10225392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
244, 88
               

               
Conread position:
               
4-371
               

               
Cow position:
               
chr6:54365435-54365068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
30, 121
               

               
Conread position:
               
4-404
               

               
Cow position:
               
chr6:46860268-46859878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 50
               

               
Conread position:
               
5-122
               

               
Cow position:
               
chr6:15923102-15922984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
5-180
               

               
Cow position:
               
chr6:38233855-38234028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
5-246
               

               
Cow position:
               
chr6:38614716-38614947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
116, 34
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr6:1499537-1499789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
79, 110
               

               
Conread position:
               
5-268
               

               
Cow position:
               
chr6:8209694-8209449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
5-283
               

               
Cow position:
               
chr6:21869751-21869478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 63
               

               
Conread position:
               
5-295
               

               
Cow position:
               
chr6:48112096-48112380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 41
               

               
Conread position:
               
5-299
               

               
Cow position:
               
chr6:6400850-6401137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
5-320
               

               
Cow position:
               
chr6:46292447-46292146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
37, 50
               

               
Conread position:
               
5-348
               

               
Cow position:
               
chr6:21456791-21456437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
89, 129
               

               
Conread position:
               
5-348
               

               
Cow position:
               
chr6:56849909-56850257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
47, 55
               

               
Conread position:
               
5-350
               

               
Cow position:
               
chr6:5095657-5095299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
27, 127
               

               
Conread position:
               
5-350
               

               
Cow position:
               
chr6:62669768-62670113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
256, 31
               

               
Conread position:
               
5-353
               

               
Cow position:
               
chr6:60274109-60273766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 14
               

               
Conread position:
               
5-360
               

               
Cow position:
               
chr6:7128505-7128155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 32
               

               
Conread position:
               
5-360
               

               
Cow position:
               
chr6:34475655-34475307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
33, 93
               

               
Conread position:
               
5-360
               

               
Cow position:
               
chr6:51581356-51581003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 81
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr6:15243153-15243515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 58
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr6:21231428-21231761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 46
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr6:59798554-59798902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
27, 73
               

               
Conread position:
               
5-371
               

               
Cow position:
               
chr6:14914348-14913970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
31, 149
               

               
Conread position:
               
5-375
               

               
Cow position:
               
chr6:36196111-36196470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 66
               

               
Conread position:
               
6-178
               

               
Cow position:
               
chr6:7824662-7824833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
119, 57
               

               
Conread position:
               
6-215
               

               
Cow position:
               
chr6:52248233-52248026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
77, 114
               

               
Conread position:
               
6-255
               

               
Cow position:
               
chr6:20196395-20196159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
6-267
               

               
Cow position:
               
chr6:38218570-38218821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
6-267
               

               
Cow position:
               
chr6:46571015-46571261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
6-332
               

               
Cow position:
               
chr6:45690691-45690394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
6-347
               

               
Cow position:
               
chr6:32287536-32287870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 120
               

               
Conread position:
               
6-349
               

               
Cow position:
               
chr6:35725993-35726331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 110
               

               
Conread position:
               
6-351
               

               
Cow position:
               
chr6:47519948-47520297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 142
               

               
Conread position:
               
6-352
               

               
Cow position:
               
chr6:15242734-15243083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
109, 49
               

               
Conread position:
               
6-361
               

               
Cow position:
               
chr6:60783766-60784127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
39, 120
               

               
Conread position:
               
6-368
               

               
Cow position:
               
chr6:21234942-21235310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
72, 79
               

               
Conread position:
               
7-348
               

               
Cow position:
               
chr6:49421884-49421556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
107, 64
               

               
Conread position:
               
7-348
               

               
Cow position:
               
chr6:53024896-53024571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 68
               

               
Conread position:
               
7-353
               

               
Cow position:
               
chr6:19264597-19264253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 101
               

               
Conread position:
               
7-361
               

               
Cow position:
               
chr6:24110183-24110539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 28
               

               
Conread position:
               
8-238
               

               
Cow position:
               
chr6:37634684-37634923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
106, 142
               

               
Conread position:
               
8-265
               

               
Cow position:
               
chr6:52901134-52901392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
102, 121
               

               
Conread position:
               
8-282
               

               
Cow position:
               
chr6:6098384-6098096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 266
               

               
Conread position:
               
8-316
               

               
Cow position:
               
chr6:61524301-61523999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
105, 73
               

               
Conread position:
               
8-318
               

               
Cow position:
               
chr6:38641394-38641701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
105, 121
               

               
Conread position:
               
8-335
               

               
Cow position:
               
chr6:60118048-60118369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
25, 95
               

               
Conread position:
               
8-347
               

               
Cow position:
               
chr6:323402-323063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 58
               

               
Conread position:
               
8-350
               

               
Cow position:
               
chr6:15937951-15937609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
257, 84
               

               
Conread position:
               
8-359
               

               
Cow position:
               
chr6:27888249-27888595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
29, 53
               

               
Conread position:
               
8-359
               

               
Cow position:
               
chr6:65264639-65264299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
25, 107
               

               
Conread position:
               
8-360
               

               
Cow position:
               
chr6:67187586-67187931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
165, 28
               

               
Conread position:
               
8-361
               

               
Cow position:
               
chr6:38771186-38771527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
314, 106
               

               
Conread position:
               
9-146
               

               
Cow position:
               
chr6:16411091-16411227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
22, 106
               

               
Conread position:
               
9-347
               

               
Cow position:
               
chr6:53841598-53841264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
250, 45
               

               
Conread position:
               
11-264
               

               
Cow position:
               
chr6:66375427-66375180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
12-236
               

               
Cow position:
               
chr6:28318308-28318522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
155, 102
               

               
Conread position:
               
12-261
               

               
Cow position:
               
chr6:16423604-16423852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 67
               

               
Conread position:
               
12-265
               

               
Cow position:
               
chr6:45065110-45064863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
180, 23
               

               
Conread position:
               
12-268
               

               
Cow position:
               
chr6:42565592-42565843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
25, 113
               

               
Conread position:
               
12-320
               

               
Cow position:
               
chr6:26915234-26915537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 107
               

               
Conread position:
               
12-324
               

               
Cow position:
               
chr6:21736982-21736689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
120, 30
               

               
Conread position:
               
12-332
               

               
Cow position:
               
chr6:63720099-63720416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 47
               

               
Conread position:
               
12-348
               

               
Cow position:
               
chr6:19292702-19293038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
19, 75
               

               
Conread position:
               
12-359
               

               
Cow position:
               
chr6:68376417-68376065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 22
               

               
Conread position:
               
12-360
               

               
Cow position:
               
chr6:44194638-44194305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
12-362
               

               
Cow position:
               
chr6:9736740-9736393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
23, 13
               

               
Conread position:
               
13-268
               

               
Cow position:
               
chr6:63047482-63047748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
13-351
               

               
Cow position:
               
chr6:13687908-13687574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 71
               

               
Conread position:
               
14-271
               

               
Cow position:
               
chr6:50975964-50976209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
234, 42
               

               
Conread position:
               
14-335
               

               
Cow position:
               
chr6:41733531-41733862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 85
               

               
Conread position:
               
14-361
               

               
Cow position:
               
chr6:17794850-17794502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
15-335
               

               
Cow position:
               
chr6:39093643-39093972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 237
               

               
Conread position:
               
16-337
               

               
Cow position:
               
chr6:19755165-19754849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
266, 23
               

               
Conread position:
               
16-347
               

               
Cow position:
               
chr6:143460-143139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
16-348
               

               
Cow position:
               
chr6:57405215-57404896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
301, 98
               

               
Conread position:
               
17-264
               

               
Cow position:
               
chr6:17245699-17245466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
11, 99
               

               
Conread position:
               
17-348
               

               
Cow position:
               
chr6:37332016-37332351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 65
               

               
Conread position:
               
19-234
               

               
Cow position:
               
chr6:60673480-60673688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
109, 35
               

               
Conread position:
               
19-315
               

               
Cow position:
               
chr6:61269221-61269515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 97
               

               
Conread position:
               
19-320
               

               
Cow position:
               
chr6:67618044-67617738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 109
               

               
Conread position:
               
19-328
               

               
Cow position:
               
chr6:9719013-9718697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 138
               

               
Conread position:
               
19-346
               

               
Cow position:
               
chr6:6965480-6965157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
229, 48
               

               
Conread position:
               
20-206
               

               
Cow position:
               
chr6:67968698-67968515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
98, 31
               

               
Conread position:
               
20-360
               

               
Cow position:
               
chr6:44566328-44566677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
12, 115
               

               
Conread position:
               
21-166
               

               
Cow position:
               
chr6:58173098-58173240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
21-361
               

               
Cow position:
               
chr6:52478501-52478156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 104
               

               
Conread position:
               
22-285
               

               
Cow position:
               
chr6:51968981-51969251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
79, 111
               

               
Conread position:
               
24-361
               

               
Cow position:
               
chr6:13565000-13565340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
82, 125
               

               
Conread position:
               
25-256
               

               
Cow position:
               
chr6:31525963-31526191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
78, 14
               

               
Conread position:
               
26-332
               

               
Cow position:
               
chr6:12092075-12091762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
209, 77
               

               
Conread position:
               
26-348
               

               
Cow position:
               
chr6:57546303-57545989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
29-276
               

               
Cow position:
               
chr6:23466108-23465869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
29-361
               

               
Cow position:
               
chr6:2623703-2624011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
319, 85
               

               
Conread position:
               
30-312
               

               
Cow position:
               
chr6:21514691-21514405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 79
               

               
Conread position:
               
30-348
               

               
Cow position:
               
chr6:38441098-38441420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
247, 84
               

               
Conread position:
               
30-361
               

               
Cow position:
               
chr6:4468690-4469020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
212, 76
               

               
Conread position:
               
30-361
               

               
Cow position:
               
chr6:33509712-33510043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
111, 83
               

               
Conread position:
               
30-361
               

               
Cow position:
               
chr6:46557976-46558306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
83, 67
               

               
Conread position:
               
30-364
               

               
Cow position:
               
chr6:8599927-8600258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
214, 76
               

               
Conread position:
               
31-343
               

               
Cow position:
               
chr6:22985935-22985627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 86
               

               
Conread position:
               
32-359
               

               
Cow position:
               
chr6:694223-693895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 47
               

               
Conread position:
               
32-359
               

               
Cow position:
               
chr6:18955141-18954842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
35-207
               

               
Cow position:
               
chr6:36493622-36493445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
97, 113
               

               
Conread position:
               
40-213
               

               
Cow position:
               
chr6:7170415-7170246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
142, 68
               

               
Conread position:
               
41-237
               

               
Cow position:
               
chr6:15022615-15022421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
41-346
               

               
Cow position:
               
chr6:54490802-54490508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
65, 88
               

               
Conread position:
               
41-349
               

               
Cow position:
               
chr6:37395475-37395161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
72, 111
               

               
Conread position:
               
42-207
               

               
Cow position:
               
chr6:1944645-1944809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
27, 107
               

               
Conread position:
               
43-203
               

               
Cow position:
               
chr6:67615496-67615338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
57-266
               

               
Cow position:
               
chr6:69500413-69500615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
57-320
               

               
Cow position:
               
chr6:68816115-68816380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
73, 59
               

               
Conread position:
               
57-336
               

               
Cow position:
               
chr6:18118103-18117823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 91
               

               
Conread position:
               
57-345
               

               
Cow position:
               
chr6:9302766-9302486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
262, 62
               

               
Conread position:
               
58-262
               

               
Cow position:
               
chr6:59770177-59770375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
58-320
               

               
Cow position:
               
chr6:67643741-67643480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
190, 53
               

               
Conread position:
               
59-283
               

               
Cow position:
               
chr6:32809227-32809452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 93
               

               
Conread position:
               
59-301
               

               
Cow position:
               
chr6:68652402-68652162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
66, 55
               

               
Conread position:
               
59-336
               

               
Cow position:
               
chr6:41375721-41375998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
221, 86
               

               
Conread position:
               
59-343
               

               
Cow position:
               
chr6:35435943-35436222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
262, 95
               

               
Conread position:
               
59-347
               

               
Cow position:
               
chr6:17068698-17068416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
59-350
               

               
Cow position:
               
chr6:24536591-24536283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
64, 91
               

               
Conread position:
               
59-352
               

               
Cow position:
               
chr6:12964804-12965098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
71, 18
               

               
Conread position:
               
59-360
               

               
Cow position:
               
chr6:60144248-60143948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 61
               

               
Conread position:
               
59-361
               

               
Cow position:
               
chr6:16288101-16287814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
59-361
               

               
Cow position:
               
chr6:60468188-60468483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
59-368
               

               
Cow position:
               
chr6:16352396-16352110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
273, 56
               

               
Conread position:
               
60-316
               

               
Cow position:
               
chr6:31078920-31078663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
106, 47
               

               
Conread position:
               
60-345
               

               
Cow position:
               
chr6:5330362-5330651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
78, 55
               

               
Conread position:
               
60-360
               

               
Cow position:
               
chr6:23353505-23353807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
180, 54
               

               
Conread position:
               
61-276
               

               
Cow position:
               
chr6:222498-222296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 41
               

               
Conread position:
               
61-335
               

               
Cow position:
               
chr6:60516780-60517065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
211, 29
               

               
Conread position:
               
61-370
               

               
Cow position:
               
chr6:2078867-2078554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 88
               

               
Conread position:
               
62-273
               

               
Cow position:
               
chr6:19259391-19259179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
9, 15
               

               
Conread position:
               
63-251
               

               
Cow position:
               
chr6:32853141-32853327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
65, 44
               

               
Conread position:
               
63-276
               

               
Cow position:
               
chr6:1422440-1422650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
25, 64
               

               
Conread position:
               
63-350
               

               
Cow position:
               
chr6:55417572-55417290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
80, 59
               

               
Conread position:
               
63-361
               

               
Cow position:
               
chr6:3350974-3351282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 93
               

               
Conread position:
               
64-347
               

               
Cow position:
               
chr6:62437370-62437656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
217, 34
               

               
Conread position:
               
64-361
               

               
Cow position:
               
chr6:16103238-16102938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
188, 13
               

               
Conread position:
               
64-361
               

               
Cow position:
               
chr6:51530230-51529940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
26, 50
               

               
Conread position:
               
65-264
               

               
Cow position:
               
chr6:19681571-19681372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
48, 57
               

               
Conread position:
               
65-269
               

               
Cow position:
               
chr6:28977087-28976883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
62, 51
               

               
Conread position:
               
65-350
               

               
Cow position:
               
chr6:21399799-21399511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
65-359
               

               
Cow position:
               
chr6:67451415-67451122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 15
               

               
Conread position:
               
69-263
               

               
Cow position:
               
chr6:32517139-32516958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
70-361
               

               
Cow position:
               
chr6:66570399-66570678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
49, 80
               

               
Conread position:
               
72-238
               

               
Cow position:
               
chr6:2899607-2899439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
64, 21
               

               
Conread position:
               
73-331
               

               
Cow position:
               
chr6:34119390-34119140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
32, 48
               

               
Conread position:
               
75-356
               

               
Cow position:
               
chr6:8094324-8094035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
75-371
               

               
Cow position:
               
chr6:60266215-60265907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
173, 40
               

               
Conread position:
               
78-371
               

               
Cow position:
               
chr6:69334342-69334053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
129, 69
               

               
Conread position:
               
79-228
               

               
Cow position:
               
chr6:12197148-12197297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 69
               

               
Conread position:
               
79-344
               

               
Cow position:
               
chr6:49437303-49437567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
194, 45
               

               
Conread position:
               
79-361
               

               
Cow position:
               
chr6:67451675-67451411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
51, 10
               

               
Conread position:
               
80-320
               

               
Cow position:
               
chr6:36921003-36920766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
52, 18
               

               
Conread position:
               
80-350
               

               
Cow position:
               
chr6:54083019-54082771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
75, 67
               

               
Conread position:
               
82-349
               

               
Cow position:
               
chr6:41015003-41014733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
188, 32
               

               
Conread position:
               
82-361
               

               
Cow position:
               
chr6:53546009-53546282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
237, 30
               

               
Conread position:
               
82-361
               

               
Cow position:
               
chr6:63065798-63066089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
18, 43
               

               
Conread position:
               
83-348
               

               
Cow position:
               
chr6:18904078-18903797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
158, 66
               

               
Conread position:
               
83-359
               

               
Cow position:
               
chr6:48097627-48097353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 24
               

               
Conread position:
               
83-361
               

               
Cow position:
               
chr6:62056587-62056863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
236, 64
               

               
Conread position:
               
83-362
               

               
Cow position:
               
chr6:68685529-68685794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
237, 30
               

               
Conread position:
               
86-347
               

               
Cow position:
               
chr6:26155129-26155384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
234, 27
               

               
Conread position:
               
86-361
               

               
Cow position:
               
chr6:50504431-50504707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 62
               

               
Conread position:
               
87-277
               

               
Cow position:
               
chr6:53089986-53090173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
43, 29
               

               
Conread position:
               
87-348
               

               
Cow position:
               
chr6:21293518-21293258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
83, 40
               

               
Conread position:
               
94-353
               

               
Cow position:
               
chr6:20219793-20219533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 56
               

               
Conread position:
               
97-346
               

               
Cow position:
               
chr6:58725364-58725605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
222, 19
               

               
Conread position:
               
97-348
               

               
Cow position:
               
chr6:35319145-35318894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
189, 15
               

               
Conread position:
               
98-353
               

               
Cow position:
               
chr6:13653340-13653591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
21, 50
               

               
Conread position:
               
98-365
               

               
Cow position:
               
chr6:66978856-66979129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
172, 94
               

               
Conread position:
               
100-275
               

               
Cow position:
               
chr6:67806027-67805852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
23, 51
               

               
Conread position:
               
101-359
               

               
Cow position:
               
chr6:66839194-66839443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
218, 24
               

               
Conread position:
               
105-361
               

               
Cow position:
               
chr6:42034768-42035022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
5, 22
               

               
Conread position:
               
107-357
               

               
Cow position:
               
chr6:5820249-5820009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
108-345
               

               
Cow position:
               
chr6:67069820-67069578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
9, 42
               

               
Conread position:
               
108-358
               

               
Cow position:
               
chr6:57320585-57320349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
153, 8
               

               
Conread position:
               
109-276
               

               
Cow position:
               
chr6:1002264-1002099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
109-361
               

               
Cow position:
               
chr6:12928146-12928393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
213, 12
               

               
Conread position:
               
109-366
               

               
Cow position:
               
chr6:58459720-58459972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
241, 38
               

               
Conread position:
               
111-364
               

               
Cow position:
               
chr6:6168688-6168943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
9, 41
               

               
Conread position:
               
112-367
               

               
Cow position:
               
chr6:29775624-29775876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
157, 37
               

               
Conread position:
               
113-361
               

               
Cow position:
               
chr6:21470427-21470180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
115-345
               

               
Cow position:
               
chr6:61109790-61110019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
120-353
               

               
Cow position:
               
chr6:57079433-57079671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
164, 27
               

               
Conread position:
               
122-361
               

               
Cow position:
               
chr6:30023897-30024130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
122-361
               

               
Cow position:
               
chr6:44636487-44636260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
229, 27
               

               
Conread position:
               
127-261
               

               
Cow position:
               
chr6:43651769-43651903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
121, 20
               

               
Conread position:
               
127-330
               

               
Cow position:
               
chr6:1871181-1870975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
151, 20
               

               
Conread position:
               
127-332
               

               
Cow position:
               
chr6:12623532-12623733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
192, 22
               

               
Conread position:
               
127-359
               

               
Cow position:
               
chr6:1866749-1866981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
181, 19
               

               
Conread position:
               
127-359
               

               
Cow position:
               
chr6:1941815-1941585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
79, 22
               

               
Conread position:
               
132-332
               

               
Cow position:
               
chr6:12761301-12761504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
138, 15
               

               
Conread position:
               
135-271
               

               
Cow position:
               
chr6:18422965-18422831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
135-360
               

               
Cow position:
               
chr6:60850725-60850949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
187, 11
               

               
Conread position:
               
137-346
               

               
Cow position:
               
chr6:50771332-50771123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
143, 10
               

               
Conread position:
               
137-360
               

               
Cow position:
               
chr6:21004701-21004932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
9, 33
               

               
Conread position:
               
138-371
               

               
Cow position:
               
chr6:51933582-51933801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
183, 9
               

               
Conread position:
               
141-347
               

               
Cow position:
               
chr6:16090934-16091136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
176, 6
               

               
Conread position:
               
141-348
               

               
Cow position:
               
chr6:23938091-23938291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
175, 8
               

               
Conread position:
               
143-283
               

               
Cow position:
               
chr6:28900359-28900497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
143-347
               

               
Cow position:
               
chr6:34569440-34569655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
110, 5
               

               
Conread position:
               
145-366
               

               
Cow position:
               
chr6:21184189-21183964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
125, 72
               

               
Conread position:
               
146-358
               

               
Cow position:
               
chr6:41226795-41226597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
148-359
               

               
Cow position:
               
chr6:21083504-21083290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
109, 125
               

               
Conread position:
               
149-348
               

               
Cow position:
               
chr6:5601740-5601940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
99, 36
               

               
Conread position:
               
149-356
               

               
Cow position:
               
chr6:3936822-3937036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
120, 29
               

               
Conread position:
               
149-359
               

               
Cow position:
               
chr6:19225350-19225141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
37, 96
               

               
Conread position:
               
149-361
               

               
Cow position:
               
chr6:36537323-36537112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
167, 98
               

               
Conread position:
               
150-347
               

               
Cow position:
               
chr6:67574427-67574629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
130, 52
               

               
Conread position:
               
150-361
               

               
Cow position:
               
chr6:18440439-18440223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
118, 91
               

               
Conread position:
               
151-351
               

               
Cow position:
               
chr6:41657307-41657508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
165, 87
               

               
Conread position:
               
153-361
               

               
Cow position:
               
chr6:36225150-36225363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
114, 88
               

               
Conread position:
               
154-353
               

               
Cow position:
               
chr6:24514503-24514289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
156-343
               

               
Cow position:
               
chr6:21350988-21350796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
98, 58
               

               
Conread position:
               
156-350
               

               
Cow position:
               
chr6:53792424-53792236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
156-361
               

               
Cow position:
               
chr6:15058421-15058628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
163, 103
               

               
Conread position:
               
156-372
               

               
Cow position:
               
chr6:24491073-24491296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
46, 110
               

               
Conread position:
               
158-332
               

               
Cow position:
               
chr6:24905674-24905846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
158, 56
               

               
Conread position:
               
159-332
               

               
Cow position:
               
chr6:40682615-40682444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
161, 31
               

               
Conread position:
               
160-359
               

               
Cow position:
               
chr6:63168715-63168511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
97, 24
               

               
Conread position:
               
161-358
               

               
Cow position:
               
chr6:60186613-60186402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
111, 86
               

               
Conread position:
               
161-362
               

               
Cow position:
               
chr6:35985087-35984880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
115, 77
               

               
Conread position:
               
163-359
               

               
Cow position:
               
chr6:14383727-14383928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
103, 67
               

               
Conread position:
               
163-366
               

               
Cow position:
               
chr6:62805694-62805903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
106, 78
               

               
Conread position:
               
165-348
               

               
Cow position:
               
chr6:55646896-55646709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
64, 11
               

               
Conread position:
               
167-347
               

               
Cow position:
               
chr6:50883620-50883440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
153, 116
               

               
Conread position:
               
167-350
               

               
Cow position:
               
chr6:32006399-32006214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
152, 91
               

               
Conread position:
               
169-361
               

               
Cow position:
               
chr6:34423401-34423208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
152, 78
               

               
Conread position:
               
170-364
               

               
Cow position:
               
chr6:28562110-28561913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
71, 98
               

               
Conread position:
               
172-347
               

               
Cow position:
               
chr6:19936509-19936329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
109, 68
               

               
Conread position:
               
172-361
               

               
Cow position:
               
chr6:35342121-35341935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
173-361
               

               
Cow position:
               
chr6:44544087-44543893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
174-347
               

               
Cow position:
               
chr6:58173412-58173581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
143, 66
               

               
Conread position:
               
177-348
               

               
Cow position:
               
chr6:34463522-34463350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
142, 82
               

               
Conread position:
               
183-335
               

               
Cow position:
               
chr6:54406727-54406576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
139, 12
               

               
Conread position:
               
183-350
               

               
Cow position:
               
chr6:4323401-4323564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
136, 65
               

               
Conread position:
               
183-352
               

               
Cow position:
               
chr6:35743050-35743225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
95, 115
               

               
Conread position:
               
183-352
               

               
Cow position:
               
chr6:48278817-48278651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
183-359
               

               
Cow position:
               
chr6:62224493-62224673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
91, 118
               

               
Conread position:
               
184-340
               

               
Cow position:
               
chr6:63182361-63182517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
136, 74
               

               
Conread position:
               
184-343
               

               
Cow position:
               
chr6:4699780-4699940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
137, 74
               

               
Conread position:
               
185-348
               

               
Cow position:
               
chr6:7291389-7291551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
134, 84
               

               
Conread position:
               
185-361
               

               
Cow position:
               
chr6:8726751-8726930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
80, 73
               

               
Conread position:
               
185-361
               

               
Cow position:
               
chr6:47698678-47698854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
79, 73
               

               
Conread position:
               
187-345
               

               
Cow position:
               
chr6:38032933-38033095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
188-320
               

               
Cow position:
               
chr6:2757861-2757991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
199-320
               

               
Cow position:
               
chr6:53235565-53235444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
202-361
               

               
Cow position:
               
chr6:21347060-21346902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
115, 45
               

               
Conread position:
               
202-365
               

               
Cow position:
               
chr6:47673057-47672898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
114, 45
               

               
Conread position:
               
205-348
               

               
Cow position:
               
chr6:66058614-66058469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
114, 53
               

               
Conread position:
               
211-345
               

               
Cow position:
               
chr6:62849025-62849158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
108, 30
               

               
Conread position:
               
271-361
               

               
Cow position:
               
chr6:54990511-54990422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
91
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               
Show alignments to all cow chromosomes.