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Cow genome map

           
Conread name:
           
Ova1-OVRM10133B11
        

               
Conread position:
               
1-164
               

               
Cow position:
               
chr12:4134430-4134580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr12:28650714-28650932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
165, 72
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr12:29411727-29411504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
167, 69
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr12:30476239-30476467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
165, 93
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr12:8869121-8868879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr12:12031073-12030828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr12:8710593-8710826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr12:26317228-26317481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
167, 20
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr12:12178683-12178940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
153, 58
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr12:28011137-28010886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr12:40028993-40028728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
165, 41
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr12:20326532-20326801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
165, 96
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr12:28471401-28471682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
162, 35
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr12:5658314-5658034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
188, 88
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr12:35377961-35378265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
176, 92
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr12:5905819-5906130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
164, 37
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr12:28582730-28582429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
182, 34
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr12:30605394-30605081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
301, 95
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr12:45814503-45814175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
165, 93
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr12:27037686-27037361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 10
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr12:17774567-17774885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
168, 46
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr12:3950589-3950252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
169, 93
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr12:11109531-11109850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
182, 42
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr12:22881812-22882149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
69, 15
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr12:29770811-29770487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
167, 37
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr12:34148589-34148264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr12:45160750-45160419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
74, 92
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr12:9914553-9914900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
164, 35
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr12:18766219-18765865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
165, 63
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr12:33323737-33323381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
167, 94
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr12:42254420-42254791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
165, 44
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr12:42167407-42167756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
264, 74
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr12:43942242-43942598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
188, 52
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr12:30662187-30661820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
165, 42
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr12:37770637-37771001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 62
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr12:5632112-5631745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
181, 46
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr12:41091291-41091677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
171, 91
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr12:3076861-3076479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
268, 91
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr12:18388520-18388140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 42
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr12:45363119-45363509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
165, 91
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr12:31532642-31532260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
165, 38
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr12:42966762-42967145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
143, 42
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr12:3473228-3472843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
73, 49
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr12:5635686-5635296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 57
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr12:19502658-19502258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 97
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr12:30805620-30806013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
170, 40
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr12:6410966-6410575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
169, 42
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr12:18123448-18123827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 42
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr12:25805348-25804984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
182, 44
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr12:30170429-30170813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 64
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr12:30745475-30745877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 38
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr12:35310911-35310521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
225, 31
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr12:5714390-5714780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 55
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr12:6241071-6241486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 96
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr12:15429838-15429435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 109
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr12:17881628-17882017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 34
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr12:36118732-36119130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
191, 91
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr12:39486191-39486591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 95
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr12:43788792-43789188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
39, 92
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr12:42602478-42602074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
170, 65
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr12:15089256-15089680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 66
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr12:15358090-15358507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
167, 91
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr12:17001020-17001405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 97
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr12:18577611-18577991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 28
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr12:27803288-27802894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
192, 91
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr12:36501190-36500783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
170, 57
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr12:42283075-42282675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
170, 32
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr12:19125065-19124653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
273, 44
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr12:19508810-19508384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 91
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr12:9482537-9482122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
22, 43
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr12:15938505-15938085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
165, 31
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr12:26782643-26783057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
268, 91
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr12:39465340-39465754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 96
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr12:42181379-42180940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 76
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr12:18040829-18040415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
268, 37
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr12:31530046-31530486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
101, 110
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr12:34332868-34333307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
87, 13
               

               
Conread position:
               
2-203
               

               
Cow position:
               
chr12:31841200-31841390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
2-340
               

               
Cow position:
               
chr12:41580875-41581203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
169, 92
               

               
Conread position:
               
2-391
               

               
Cow position:
               
chr12:4866577-4866958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 43
               

               
Conread position:
               
2-396
               

               
Cow position:
               
chr12:23574533-23574919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
267, 43
               

               
Conread position:
               
2-397
               

               
Cow position:
               
chr12:11056639-11057016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 95
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr12:42954131-42953745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
164, 51
               

               
Conread position:
               
2-402
               

               
Cow position:
               
chr12:35669703-35669317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
166, 30
               

               
Conread position:
               
2-408
               

               
Cow position:
               
chr12:25561133-25561527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 46
               

               
Conread position:
               
2-409
               

               
Cow position:
               
chr12:20777168-20776767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 46
               

               
Conread position:
               
2-412
               

               
Cow position:
               
chr12:18421164-18420754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 93
               

               
Conread position:
               
2-432
               

               
Cow position:
               
chr12:43476118-43476538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
188, 88
               

               
Conread position:
               
2-437
               

               
Cow position:
               
chr12:1889817-1889390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
165, 41
               

               
Conread position:
               
2-441
               

               
Cow position:
               
chr12:40910528-40910090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 58
               

               
Conread position:
               
3-331
               

               
Cow position:
               
chr12:25177829-25177515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
30, 100
               

               
Conread position:
               
3-398
               

               
Cow position:
               
chr12:5459027-5459403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
266, 42
               

               
Conread position:
               
3-403
               

               
Cow position:
               
chr12:32169300-32169702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 89
               

               
Conread position:
               
3-409
               

               
Cow position:
               
chr12:35368407-35368806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
163, 40
               

               
Conread position:
               
3-409
               

               
Cow position:
               
chr12:35771268-35770862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 104
               

               
Conread position:
               
4-409
               

               
Cow position:
               
chr12:4162606-4162211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
162, 90
               

               
Conread position:
               
4-411
               

               
Cow position:
               
chr12:35780162-35779756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
162, 84
               

               
Conread position:
               
4-414
               

               
Cow position:
               
chr12:17080023-17080433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 22
               

               
Conread position:
               
5-263
               

               
Cow position:
               
chr12:37190083-37190328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
182, 61
               

               
Conread position:
               
5-397
               

               
Cow position:
               
chr12:4093989-4093619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
69, 43
               

               
Conread position:
               
5-397
               

               
Cow position:
               
chr12:8943455-8943065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 58
               

               
Conread position:
               
5-411
               

               
Cow position:
               
chr12:24024026-24023647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
147, 36
               

               
Conread position:
               
6-436
               

               
Cow position:
               
chr12:4008514-4008091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 86
               

               
Conread position:
               
7-389
               

               
Cow position:
               
chr12:24662883-24663262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 46
               

               
Conread position:
               
8-403
               

               
Cow position:
               
chr12:41083834-41084201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 90
               

               
Conread position:
               
8-411
               

               
Cow position:
               
chr12:29899668-29899257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
157, 83
               

               
Conread position:
               
8-433
               

               
Cow position:
               
chr12:42160784-42160373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 84
               

               
Conread position:
               
9-211
               

               
Cow position:
               
chr12:18937157-18937367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
150, 98
               

               
Conread position:
               
9-263
               

               
Cow position:
               
chr12:6164259-6164009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
159, 88
               

               
Conread position:
               
9-339
               

               
Cow position:
               
chr12:45820593-45820275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 82
               

               
Conread position:
               
9-398
               

               
Cow position:
               
chr12:9143163-9143535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 87
               

               
Conread position:
               
11-395
               

               
Cow position:
               
chr12:28748706-28749092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 64
               

               
Conread position:
               
13-157
               

               
Cow position:
               
chr12:16310203-16310338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
14-411
               

               
Cow position:
               
chr12:31947897-31948276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
6, 30
               

               
Conread position:
               
18-225
               

               
Cow position:
               
chr12:18021372-18021567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
147, 41
               

               
Conread position:
               
18-370
               

               
Cow position:
               
chr12:15763131-15762788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
158, 27
               

               
Conread position:
               
18-409
               

               
Cow position:
               
chr12:4596228-4596635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
90, 135
               

               
Conread position:
               
18-409
               

               
Cow position:
               
chr12:33129043-33129416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 69
               

               
Conread position:
               
18-409
               

               
Cow position:
               
chr12:41159369-41159743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
178, 45
               

               
Conread position:
               
18-436
               

               
Cow position:
               
chr12:41216846-41217257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
251, 74
               

               
Conread position:
               
19-409
               

               
Cow position:
               
chr12:30210258-30210632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 79
               

               
Conread position:
               
23-409
               

               
Cow position:
               
chr12:25917483-25917118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 74
               

               
Conread position:
               
24-403
               

               
Cow position:
               
chr12:33851140-33851512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 73
               

               
Conread position:
               
27-406
               

               
Cow position:
               
chr12:13643020-13643394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
205, 67
               

               
Conread position:
               
29-141
               

               
Cow position:
               
chr12:19420150-19420042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
29-407
               

               
Cow position:
               
chr12:25027996-25027596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
139, 78
               

               
Conread position:
               
30-208
               

               
Cow position:
               
chr12:6121141-6121321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
138, 65
               

               
Conread position:
               
33-408
               

               
Cow position:
               
chr12:44622144-44622521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 64
               

               
Conread position:
               
33-409
               

               
Cow position:
               
chr12:17031405-17031771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 64
               

               
Conread position:
               
33-409
               

               
Cow position:
               
chr12:18518456-18518834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 62
               

               
Conread position:
               
33-433
               

               
Cow position:
               
chr12:25989398-25989029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
195, 12
               

               
Conread position:
               
34-409
               

               
Cow position:
               
chr12:36544858-36544482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 63
               

               
Conread position:
               
34-410
               

               
Cow position:
               
chr12:9710417-9710042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
134, 14
               

               
Conread position:
               
35-409
               

               
Cow position:
               
chr12:12599855-12600218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
146, 77
               

               
Conread position:
               
37-409
               

               
Cow position:
               
chr12:33975998-33976365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
134, 8
               

               
Conread position:
               
38-237
               

               
Cow position:
               
chr12:13017791-13017589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
132, 118
               

               
Conread position:
               
39-341
               

               
Cow position:
               
chr12:15530854-15531150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
128, 57
               

               
Conread position:
               
39-397
               

               
Cow position:
               
chr12:42879493-42879849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
40-411
               

               
Cow position:
               
chr12:17879505-17879141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 31
               

               
Conread position:
               
43-409
               

               
Cow position:
               
chr12:4768726-4769081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
104, 49
               

               
Conread position:
               
43-436
               

               
Cow position:
               
chr12:11836033-11836421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
123, 53
               

               
Conread position:
               
47-381
               

               
Cow position:
               
chr12:7299665-7299327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
6, 52
               

               
Conread position:
               
48-287
               

               
Cow position:
               
chr12:18550687-18550919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
139, 49
               

               
Conread position:
               
49-340
               

               
Cow position:
               
chr12:7000796-7000513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
117, 10
               

               
Conread position:
               
51-398
               

               
Cow position:
               
chr12:46714177-46714528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
115, 31
               

               
Conread position:
               
51-415
               

               
Cow position:
               
chr12:28131392-28131760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
38, 60
               

               
Conread position:
               
52-397
               

               
Cow position:
               
chr12:11587576-11587919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
116, 46
               

               
Conread position:
               
52-411
               

               
Cow position:
               
chr12:38774431-38774081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 40
               

               
Conread position:
               
53-437
               

               
Cow position:
               
chr12:30804166-30803790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
145, 39
               

               
Conread position:
               
60-397
               

               
Cow position:
               
chr12:20849805-20850144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
60-411
               

               
Cow position:
               
chr12:42685130-42684771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
105, 37
               

               
Conread position:
               
60-438
               

               
Cow position:
               
chr12:30919237-30919625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 62
               

               
Conread position:
               
61-358
               

               
Cow position:
               
chr12:3599943-3599652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 39
               

               
Conread position:
               
66-428
               

               
Cow position:
               
chr12:1998977-1998619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
93, 26
               

               
Conread position:
               
67-408
               

               
Cow position:
               
chr12:23446539-23446877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
100, 32
               

               
Conread position:
               
72-378
               

               
Cow position:
               
chr12:20636330-20636019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
83, 20
               

               
Conread position:
               
74-437
               

               
Cow position:
               
chr12:12165490-12165844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
195, 18
               

               
Conread position:
               
77-400
               

               
Cow position:
               
chr12:22485647-22485966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
192, 22
               

               
Conread position:
               
87-395
               

               
Cow position:
               
chr12:12637350-12637037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
79, 20
               

               
Conread position:
               
88-409
               

               
Cow position:
               
chr12:15039140-15038823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
97, 19
               

               
Conread position:
               
90-411
               

               
Cow position:
               
chr12:22285284-22284958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 63
               

               
Conread position:
               
92-394
               

               
Cow position:
               
chr12:31517327-31517036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 15
               

               
Conread position:
               
95-383
               

               
Cow position:
               
chr12:6102984-6102691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
67, 13
               

               
Conread position:
               
95-408
               

               
Cow position:
               
chr12:44203141-44202832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
68, 15
               

               
Conread position:
               
99-331
               

               
Cow position:
               
chr12:41216040-41215801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
9, 53
               

               
Conread position:
               
99-396
               

               
Cow position:
               
chr12:15122164-15122474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 56
               

               
Conread position:
               
99-400
               

               
Cow position:
               
chr12:15703653-15703342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
99-408
               

               
Cow position:
               
chr12:36790966-36790652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
66, 53
               

               
Conread position:
               
99-409
               

               
Cow position:
               
chr12:42784152-42784469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
65, 53
               

               
Conread position:
               
100-408
               

               
Cow position:
               
chr12:11659771-11660088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
103-435
               

               
Cow position:
               
chr12:7539943-7539597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
65, 49
               

               
Conread position:
               
104-432
               

               
Cow position:
               
chr12:19258129-19258459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
62, 47
               

               
Conread position:
               
104-436
               

               
Cow position:
               
chr12:9767024-9766693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 59
               

               
Conread position:
               
107-396
               

               
Cow position:
               
chr12:19400957-19400667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 43
               

               
Conread position:
               
107-407
               

               
Cow position:
               
chr12:6242322-6242015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
71, 45
               

               
Conread position:
               
107-408
               

               
Cow position:
               
chr12:26217973-26217666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
59, 45
               

               
Conread position:
               
107-409
               

               
Cow position:
               
chr12:12300774-12301089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
59, 45
               

               
Conread position:
               
107-409
               

               
Cow position:
               
chr12:23916696-23917001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
59, 46
               

               
Conread position:
               
107-410
               

               
Cow position:
               
chr12:16670118-16670429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 45
               

               
Conread position:
               
107-411
               

               
Cow position:
               
chr12:15050764-15050462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 45
               

               
Conread position:
               
107-411
               

               
Cow position:
               
chr12:15103118-15103440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
64, 45
               

               
Conread position:
               
107-417
               

               
Cow position:
               
chr12:15415020-15414699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
58, 45
               

               
Conread position:
               
107-429
               

               
Cow position:
               
chr12:13988224-13988557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
57, 43
               

               
Conread position:
               
107-431
               

               
Cow position:
               
chr12:4719799-4720126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
58, 43
               

               
Conread position:
               
108-341
               

               
Cow position:
               
chr12:46120976-46120738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
81, 44
               

               
Conread position:
               
108-400
               

               
Cow position:
               
chr12:24116510-24116220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
108-403
               

               
Cow position:
               
chr12:26575739-26576048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
20, 45
               

               
Conread position:
               
108-403
               

               
Cow position:
               
chr12:37170089-37169793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 44
               

               
Conread position:
               
109-409
               

               
Cow position:
               
chr12:20479468-20479182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
160, 50
               

               
Conread position:
               
109-415
               

               
Cow position:
               
chr12:3372004-3371687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 41
               

               
Conread position:
               
110-411
               

               
Cow position:
               
chr12:24032357-24032651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 67
               

               
Conread position:
               
111-340
               

               
Cow position:
               
chr12:19507488-19507726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 41
               

               
Conread position:
               
114-443
               

               
Cow position:
               
chr12:17269659-17269994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 40
               

               
Conread position:
               
118-433
               

               
Cow position:
               
chr12:29675273-29674952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
48, 21
               

               
Conread position:
               
124-411
               

               
Cow position:
               
chr12:10942155-10942458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
42, 28
               

               
Conread position:
               
127-291
               

               
Cow position:
               
chr12:3092700-3092538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
66, 25
               

               
Conread position:
               
127-336
               

               
Cow position:
               
chr12:44733219-44733005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
127-409
               

               
Cow position:
               
chr12:7884809-7884518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
127-411
               

               
Cow position:
               
chr12:4193707-4194000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
59, 23
               

               
Conread position:
               
128-408
               

               
Cow position:
               
chr12:7902928-7902644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
129-376
               

               
Cow position:
               
chr12:37814749-37814493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 86
               

               
Conread position:
               
129-437
               

               
Cow position:
               
chr12:33495107-33495423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
130-395
               

               
Cow position:
               
chr12:6484024-6484276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
139, 22
               

               
Conread position:
               
130-409
               

               
Cow position:
               
chr12:12531198-12530914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
38, 22
               

               
Conread position:
               
130-409
               

               
Cow position:
               
chr12:14222852-14223145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 23
               

               
Conread position:
               
130-411
               

               
Cow position:
               
chr12:19261074-19261359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
133-407
               

               
Cow position:
               
chr12:3371665-3371388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 19
               

               
Conread position:
               
133-433
               

               
Cow position:
               
chr12:46122549-46122851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
46, 16
               

               
Conread position:
               
133-434
               

               
Cow position:
               
chr12:38126648-38126336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
136-432
               

               
Cow position:
               
chr12:39746288-39746594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
32, 14
               

               
Conread position:
               
145-407
               

               
Cow position:
               
chr12:18514034-18513766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 14
               

               
Conread position:
               
145-408
               

               
Cow position:
               
chr12:18583102-18582838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
44, 8
               

               
Conread position:
               
145-418
               

               
Cow position:
               
chr12:29358166-29357896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
24, 9
               

               
Conread position:
               
150-429
               

               
Cow position:
               
chr12:17479144-17478858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
150-436
               

               
Cow position:
               
chr12:11977587-11977876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
66, 21
               

               
Conread position:
               
151-436
               

               
Cow position:
               
chr12:25343678-25343972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 78
               

               
Conread position:
               
163-300
               

               
Cow position:
               
chr12:30819155-30819295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
163-392
               

               
Cow position:
               
chr12:24043254-24043011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
163-400
               

               
Cow position:
               
chr12:23939137-23939372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
106, 28
               

               
Conread position:
               
163-436
               

               
Cow position:
               
chr12:42749354-42749632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
106, 23
               

               
Conread position:
               
164-335
               

               
Cow position:
               
chr12:15641193-15641021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
77, 22
               

               
Conread position:
               
168-339
               

               
Cow position:
               
chr12:26151542-26151369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
101, 77
               

               
Conread position:
               
168-409
               

               
Cow position:
               
chr12:6687811-6688047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
168-411
               

               
Cow position:
               
chr12:27192451-27192202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 17
               

               
Conread position:
               
168-449
               

               
Cow position:
               
chr12:21780083-21780363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
101, 11
               

               
Conread position:
               
169-350
               

               
Cow position:
               
chr12:23644887-23644701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
6, 155
               

               
Conread position:
               
169-403
               

               
Cow position:
               
chr12:37008784-37008554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
169-409
               

               
Cow position:
               
chr12:5554417-5554175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
8, 160
               

               
Conread position:
               
169-411
               

               
Cow position:
               
chr12:27176553-27176802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
5, 17
               

               
Conread position:
               
170-399
               

               
Cow position:
               
chr12:26777266-26777042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
99, 12
               

               
Conread position:
               
170-411
               

               
Cow position:
               
chr12:17252278-17252039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
99, 63
               

               
Conread position:
               
171-397
               

               
Cow position:
               
chr12:42631119-42630885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
171-403
               

               
Cow position:
               
chr12:33948828-33949056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
98, 10
               

               
Conread position:
               
171-411
               

               
Cow position:
               
chr12:24273440-24273208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 78
               

               
Conread position:
               
171-414
               

               
Cow position:
               
chr12:11525673-11525424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
171-433
               

               
Cow position:
               
chr12:5839737-5839476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
19, 153
               

               
Conread position:
               
172-411
               

               
Cow position:
               
chr12:45092371-45092603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
97, 13
               

               
Conread position:
               
176-411
               

               
Cow position:
               
chr12:29057315-29057554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
178-409
               

               
Cow position:
               
chr12:10827713-10827948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
94, 128
               

               
Conread position:
               
178-409
               

               
Cow position:
               
chr12:33625478-33625241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
178-435
               

               
Cow position:
               
chr12:42924184-42923925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
91, 13
               

               
Conread position:
               
179-403
               

               
Cow position:
               
chr12:5135163-5135388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
95, 13
               

               
Conread position:
               
179-403
               

               
Cow position:
               
chr12:37255949-37256174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
90, 50
               

               
Conread position:
               
179-408
               

               
Cow position:
               
chr12:46464137-46463890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
90, 7
               

               
Conread position:
               
179-409
               

               
Cow position:
               
chr12:4594429-4594661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
10, 183
               

               
Conread position:
               
179-431
               

               
Cow position:
               
chr12:12232812-12233066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 68
               

               
Conread position:
               
179-433
               

               
Cow position:
               
chr12:4780482-4780227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
181-400
               

               
Cow position:
               
chr12:40881980-40881770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
8, 89
               

               
Conread position:
               
181-428
               

               
Cow position:
               
chr12:6188183-6187928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
182-360
               

               
Cow position:
               
chr12:27357320-27357494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
87, 37
               

               
Conread position:
               
182-403
               

               
Cow position:
               
chr12:18157615-18157389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
183-340
               

               
Cow position:
               
chr12:19274464-19274306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
86, 72
               

               
Conread position:
               
183-411
               

               
Cow position:
               
chr12:6206266-6206498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
123, 30
               

               
Conread position:
               
183-431
               

               
Cow position:
               
chr12:16605740-16605485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
86, 172
               

               
Conread position:
               
184-411
               

               
Cow position:
               
chr12:18563097-18563326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
184-411
               

               
Cow position:
               
chr12:37514348-37514117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
5, 134
               

               
Conread position:
               
185-408
               

               
Cow position:
               
chr12:36261624-36261855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
186-340
               

               
Cow position:
               
chr12:33319734-33319574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
186-399
               

               
Cow position:
               
chr12:31925787-31926007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
186-403
               

               
Cow position:
               
chr12:40158086-40157872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
116, 58
               

               
Conread position:
               
188-340
               

               
Cow position:
               
chr12:15260701-15260853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
81, 138
               

               
Conread position:
               
188-402
               

               
Cow position:
               
chr12:15389009-15389225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
81, 153
               

               
Conread position:
               
188-430
               

               
Cow position:
               
chr12:34029189-34028942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
188-430
               

               
Cow position:
               
chr12:38155133-38154885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
188-431
               

               
Cow position:
               
chr12:45039045-45039293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
42, 142
               

               
Conread position:
               
188-435
               

               
Cow position:
               
chr12:9065493-9065750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
193-437
               

               
Cow position:
               
chr12:43974236-43974482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
76, 44
               

               
Conread position:
               
195-406
               

               
Cow position:
               
chr12:27385435-27385646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
141, 82
               

               
Conread position:
               
197-431
               

               
Cow position:
               
chr12:41801874-41802113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 227
               

               
Conread position:
               
197-438
               

               
Cow position:
               
chr12:45638428-45638674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
72, 20
               

               
Conread position:
               
198-398
               

               
Cow position:
               
chr12:42434792-42434586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
198-432
               

               
Cow position:
               
chr12:31067493-31067250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
199-397
               

               
Cow position:
               
chr12:33141748-33141951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
70, 98
               

               
Conread position:
               
199-400
               

               
Cow position:
               
chr12:24181098-24181296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 43
               

               
Conread position:
               
199-407
               

               
Cow position:
               
chr12:30946692-30946906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
199-408
               

               
Cow position:
               
chr12:26750003-26749789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
70, 176
               

               
Conread position:
               
199-409
               

               
Cow position:
               
chr12:35241156-35240941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
199-412
               

               
Cow position:
               
chr12:45002118-45001906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
70, 121
               

               
Conread position:
               
200-392
               

               
Cow position:
               
chr12:12532541-12532346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
69, 100
               

               
Conread position:
               
200-408
               

               
Cow position:
               
chr12:9129859-9130064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
105, 143
               

               
Conread position:
               
200-411
               

               
Cow position:
               
chr12:2734958-2734747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
72, 131
               

               
Conread position:
               
201-411
               

               
Cow position:
               
chr12:35469496-35469286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 126
               

               
Conread position:
               
201-434
               

               
Cow position:
               
chr12:45126902-45126675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 110
               

               
Conread position:
               
202-438
               

               
Cow position:
               
chr12:12166499-12166260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
67, 16
               

               
Conread position:
               
203-403
               

               
Cow position:
               
chr12:26147217-26147012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
66, 133
               

               
Conread position:
               
203-406
               

               
Cow position:
               
chr12:43854847-43855049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 43
               

               
Conread position:
               
203-408
               

               
Cow position:
               
chr12:24437682-24437471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
204-408
               

               
Cow position:
               
chr12:23714628-23714833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
7, 118
               

               
Conread position:
               
204-408
               

               
Cow position:
               
chr12:24166990-24166789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
65, 120
               

               
Conread position:
               
204-435
               

               
Cow position:
               
chr12:23105891-23106125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
65, 212
               

               
Conread position:
               
205-408
               

               
Cow position:
               
chr12:14986704-14986908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
64, 112
               

               
Conread position:
               
205-408
               

               
Cow position:
               
chr12:48578798-48578996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
64, 112
               

               
Conread position:
               
208-437
               

               
Cow position:
               
chr12:19061548-19061314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
61, 47
               

               
Conread position:
               
210-411
               

               
Cow position:
               
chr12:29731274-29731475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
55, 119
               

               
Conread position:
               
212-408
               

               
Cow position:
               
chr12:29316501-29316301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
5, 151
               

               
Conread position:
               
214-403
               

               
Cow position:
               
chr12:31841533-31841726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
215-394
               

               
Cow position:
               
chr12:6480605-6480789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
216-408
               

               
Cow position:
               
chr12:2964016-2964207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
53, 30
               

               
Conread position:
               
216-408
               

               
Cow position:
               
chr12:29180639-29180835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
25, 114
               

               
Conread position:
               
216-437
               

               
Cow position:
               
chr12:6958185-6958410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
217-408
               

               
Cow position:
               
chr12:31547564-31547761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
217-409
               

               
Cow position:
               
chr12:1952834-1952643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
219-395
               

               
Cow position:
               
chr12:44861291-44861109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
220-396
               

               
Cow position:
               
chr12:41221039-41220864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
49, 107
               

               
Conread position:
               
220-396
               

               
Cow position:
               
chr12:42944104-42944286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
49, 132
               

               
Conread position:
               
220-409
               

               
Cow position:
               
chr12:39311375-39311572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
223-406
               

               
Cow position:
               
chr12:26357398-26357208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
225-400
               

               
Cow position:
               
chr12:4512475-4512298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
44, 103
               

               
Conread position:
               
225-411
               

               
Cow position:
               
chr12:20439282-20439095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
44, 102
               

               
Conread position:
               
227-407
               

               
Cow position:
               
chr12:3057064-3057249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
228-409
               

               
Cow position:
               
chr12:26356733-26356546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
228-409
               

               
Cow position:
               
chr12:29880171-29879984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
228-437
               

               
Cow position:
               
chr12:11272848-11272639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
44, 76
               

               
Conread position:
               
231-392
               

               
Cow position:
               
chr12:30649421-30649587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
231-432
               

               
Cow position:
               
chr12:38010106-38009896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 97
               

               
Conread position:
               
232-442
               

               
Cow position:
               
chr12:30690893-30690680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
234-408
               

               
Cow position:
               
chr12:19272705-19272529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 93
               

               
Conread position:
               
234-456
               

               
Cow position:
               
chr12:38679033-38679253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
35, 93
               

               
Conread position:
               
237-410
               

               
Cow position:
               
chr12:583523-583341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
239-435
               

               
Cow position:
               
chr12:8710974-8711168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
241-408
               

               
Cow position:
               
chr12:17108150-17108315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 20
               

               
Conread position:
               
241-408
               

               
Cow position:
               
chr12:40309312-40309473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 6
               

               
Conread position:
               
241-409
               

               
Cow position:
               
chr12:10611651-10611819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
75, 60
               

               
Conread position:
               
241-437
               

               
Cow position:
               
chr12:12699650-12699447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
242-408
               

               
Cow position:
               
chr12:4008095-4007922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
242-411
               

               
Cow position:
               
chr12:34877822-34878002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
242-412
               

               
Cow position:
               
chr12:4014441-4014257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
244-449
               

               
Cow position:
               
chr12:17254135-17254337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 85
               

               
Conread position:
               
246-430
               

               
Cow position:
               
chr12:41684503-41684686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 59
               

               
Conread position:
               
248-411
               

               
Cow position:
               
chr12:22047919-22048088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
21, 51
               

               
Conread position:
               
250-409
               

               
Cow position:
               
chr12:38032140-38031981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 78
               

               
Conread position:
               
251-403
               

               
Cow position:
               
chr12:29762249-29762087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
251-410
               

               
Cow position:
               
chr12:46106791-46106953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 10
               

               
Conread position:
               
254-409
               

               
Cow position:
               
chr12:2835407-2835567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 50
               

               
Conread position:
               
258-408
               

               
Cow position:
               
chr12:20637528-20637377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 68
               

               
Conread position:
               
262-411
               

               
Cow position:
               
chr12:40435031-40434879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
265-411
               

               
Cow position:
               
chr12:15151853-15151712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
37, 62
               

               
Conread position:
               
267-409
               

               
Cow position:
               
chr12:37420488-37420341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
268-437
               

               
Cow position:
               
chr12:38165522-38165351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
29, 145
               

               
Conread position:
               
271-409
               

               
Cow position:
               
chr12:44892229-44892371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
278-406
               

               
Cow position:
               
chr12:3579513-3579643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
294-408
               

               
Cow position:
               
chr12:28779387-28779501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
305-411
               

               
Cow position:
               
chr12:6719445-6719554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
306-410
               

               
Cow position:
               
chr12:403800-403695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
307-408
               

               
Cow position:
               
chr12:11090503-11090605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
309-408
               

               
Cow position:
               
chr12:9791217-9791118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
309-409
               

               
Cow position:
               
chr12:44211217-44211317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.