Cow genome map

Conread name: Ova1-OVRM10133B11

Conread position: 1-150
Cow position: chr21:31159120-31159261 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 82, 94

Conread position: 1-163
Cow position: chr21:34738462-34738620 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 45

Conread position: 1-225
Cow position: chr21:2785916-2785699 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 165, 91

Conread position: 1-227
Cow position: chr21:12961039-12960819 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 175
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 150, 96

Conread position: 1-230
Cow position: chr21:5636857-5636641 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 165, 37

Conread position: 1-235
Cow position: chr21:7132599-7132391 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 1-235
Cow position: chr21:20925643-20925418 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 165, 42

Conread position: 1-260
Cow position: chr21:2679416-2679669 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 164, 96

Conread position: 1-260
Cow position: chr21:17175008-17175255 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 169, 34

Conread position: 1-263
Cow position: chr21:426653-426922 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 123, 93

Conread position: 1-267
Cow position: chr21:23150156-23149902 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 177, 32

Conread position: 1-268
Cow position: chr21:23192654-23192389 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 207
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 167, 97

Conread position: 1-275
Cow position: chr21:19363600-19363332 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 214
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 126, 59

Conread position: 1-280
Cow position: chr21:13488383-13488660 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 219
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 170, 60

Conread position: 1-282
Cow position: chr21:46143807-46144094 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 201
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 81, 61

Conread position: 1-283
Cow position: chr21:725028-724749 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 98

Conread position: 1-286
Cow position: chr21:5566854-5567125 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 50, 75

Conread position: 1-289
Cow position: chr21:11250729-11251011 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 209
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 93, 107

Conread position: 1-295
Cow position: chr21:42540357-42540074 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 215
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 56, 97

Conread position: 1-298
Cow position: chr21:16187942-16187656 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 225
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 167, 58

Conread position: 1-310
Cow position: chr21:12617003-12617327 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 235
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 96, 46

Conread position: 1-321
Cow position: chr21:30990405-30990111 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 234
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 268, 29

Conread position: 1-322
Cow position: chr21:12723020-12723328 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 239
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 153, 95

Conread position: 1-324
Cow position: chr21:28442608-28442910 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 229
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 268, 47

Conread position: 1-325
Cow position: chr21:33210062-33210369 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 107

Conread position: 1-330
Cow position: chr21:10000944-10001259 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 230
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 165, 11

Conread position: 1-331
Cow position: chr21:28190892-28191217 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 234
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 108, 120

Conread position: 1-333
Cow position: chr21:33562877-33563190 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 230
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 169, 30

Conread position: 1-334
Cow position: chr21:10151658-10151993 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 165, 47

Conread position: 1-334
Cow position: chr21:28989476-28989804 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 229
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 175, 46

Conread position: 1-334
Cow position: chr21:47764249-47763930 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 232
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 60

Conread position: 1-335
Cow position: chr21:41597679-41598000 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 224
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 268, 93

Conread position: 1-336
Cow position: chr21:12801883-12801555 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 245
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 120, 47

Conread position: 1-336
Cow position: chr21:29484847-29485168 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 47

Conread position: 1-336
Cow position: chr21:32237161-32237470 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 237
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 268, 42

Conread position: 1-336
Cow position: chr21:45473893-45473567 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 229
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 167, 42

Conread position: 1-337
Cow position: chr21:36795467-36795796 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 231
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 165, 47

Conread position: 1-338
Cow position: chr21:31662324-31662660 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 228
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 125, 85

Conread position: 1-339
Cow position: chr21:712798-713136 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 227
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 91, 40

Conread position: 1-339
Cow position: chr21:5392679-5392344 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 81

Conread position: 1-339
Cow position: chr21:7582046-7581712 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 242
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 177, 96

Conread position: 1-339
Cow position: chr21:24642383-24642705 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 237
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 152, 29

Conread position: 1-339
Cow position: chr21:27624575-27624892 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 247
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 268, 26

Conread position: 1-340
Cow position: chr21:33350606-33350935 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 93

Conread position: 1-362
Cow position: chr21:1591412-1591762 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 251
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 66, 22

Conread position: 1-363
Cow position: chr21:21169631-21169275 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 255
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 127, 62

Conread position: 1-371
Cow position: chr21:31691342-31691699 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 84

Conread position: 1-373
Cow position: chr21:40786534-40786908 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 267
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 184, 91

Conread position: 1-383
Cow position: chr21:19615035-19615410 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 260
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 88, 17

Conread position: 1-394
Cow position: chr21:7825312-7824941 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 54

Conread position: 1-396
Cow position: chr21:10114465-10114082 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 277
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 136, 44

Conread position: 1-396
Cow position: chr21:19196303-19195910 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 270
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 181, 91

Conread position: 1-396
Cow position: chr21:28027667-28028050 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 273
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 228, 49

Conread position: 1-397
Cow position: chr21:27863656-27863267 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 281
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 165, 92

Conread position: 1-397
Cow position: chr21:41579611-41580007 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 93

Conread position: 1-398
Cow position: chr21:11740267-11739866 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 119

Conread position: 1-400
Cow position: chr21:47465257-47464864 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 21

Conread position: 1-403
Cow position: chr21:14464440-14464844 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 55

Conread position: 1-403
Cow position: chr21:24598525-24598901 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 287
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 176, 44

Conread position: 1-403
Cow position: chr21:29214285-29213901 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 46

Conread position: 1-403
Cow position: chr21:38900638-38901021 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 91

Conread position: 1-403
Cow position: chr21:41974515-41974109 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 96

Conread position: 1-406
Cow position: chr21:17183785-17184179 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 29

Conread position: 1-406
Cow position: chr21:24858175-24858577 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 94

Conread position: 1-407
Cow position: chr21:11645105-11644704 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 64

Conread position: 1-407
Cow position: chr21:22718917-22718521 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 281
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 169, 62

Conread position: 1-407
Cow position: chr21:29069465-29069061 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 42

Conread position: 1-408
Cow position: chr21:937902-938284 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 277
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 268, 34

Conread position: 1-408
Cow position: chr21:7672996-7673376 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 287
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 107, 44

Conread position: 1-408
Cow position: chr21:17875332-17874927 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 282
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 170, 91

Conread position: 1-408
Cow position: chr21:20262470-20262084 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 36

Conread position: 1-408
Cow position: chr21:23586740-23587135 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 91

Conread position: 1-408
Cow position: chr21:25764498-25764879 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 292
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 164, 96

Conread position: 1-408
Cow position: chr21:27569297-27568896 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 40

Conread position: 1-408
Cow position: chr21:37299333-37299723 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 34

Conread position: 1-408
Cow position: chr21:41590693-41590303 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 62

Conread position: 1-408
Cow position: chr21:44826020-44825612 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 35

Conread position: 1-409
Cow position: chr21:641448-641848 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 7

Conread position: 1-409
Cow position: chr21:643197-643584 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 42

Conread position: 1-409
Cow position: chr21:957531-957933 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 95

Conread position: 1-409
Cow position: chr21:3585495-3585100 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 290
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 164, 32

Conread position: 1-409
Cow position: chr21:5898534-5898145 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 289
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 163, 56

Conread position: 1-409
Cow position: chr21:6833916-6834314 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 284
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 198, 37

Conread position: 1-409
Cow position: chr21:12153999-12154389 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 273
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 34, 59

Conread position: 1-409
Cow position: chr21:13840186-13840592 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 14

Conread position: 1-409
Cow position: chr21:15911264-15911642 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 288
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 118, 34

Conread position: 1-409
Cow position: chr21:32297647-32297244 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 94

Conread position: 1-409
Cow position: chr21:33997358-33996986 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 286
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 165, 34

Conread position: 1-409
Cow position: chr21:37479820-37480228 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 55

Conread position: 1-409
Cow position: chr21:38449588-38449188 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 62

Conread position: 1-409
Cow position: chr21:42500896-42501316 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 298
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 65, 92

Conread position: 1-409
Cow position: chr21:44251962-44251577 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 291
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 188, 42

Conread position: 1-409
Cow position: chr21:46849259-46848869 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 283
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 170, 44

Conread position: 1-410
Cow position: chr21:4282004-4281618 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 275
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 155, 40

Conread position: 1-410
Cow position: chr21:18065060-18064661 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 287
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 104, 52

Conread position: 1-410
Cow position: chr21:28244339-28244732 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 283
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 165, 40

Conread position: 1-411
Cow position: chr21:9310909-9311320 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 275
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 88, 63

Conread position: 1-411
Cow position: chr21:11027494-11027092 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 265
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 88, 110

Conread position: 1-411
Cow position: chr21:15445215-15444816 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 282
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 167, 59

Conread position: 1-411
Cow position: chr21:17511640-17512040 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 274
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 88, 18

Conread position: 1-411
Cow position: chr21:18568786-18568372 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 58

Conread position: 1-411
Cow position: chr21:20152811-20153223 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 47

Conread position: 1-411
Cow position: chr21:23568077-23568491 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 76

Conread position: 1-411
Cow position: chr21:23606538-23606933 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 269
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 32

Conread position: 1-411
Cow position: chr21:34010527-34010128 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 285
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 169, 29

Conread position: 1-411
Cow position: chr21:41155724-41156137 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 279
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 177, 40

Conread position: 1-411
Cow position: chr21:41620983-41621393 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 288
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 32, 96

Conread position: 1-411
Cow position: chr21:48234295-48233910 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 292
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 199, 29

Conread position: 1-412
Cow position: chr21:5970974-5970579 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 272
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 129, 7

Conread position: 1-424
Cow position: chr21:33982945-33982535 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 90

Conread position: 1-428
Cow position: chr21:3763874-3763470 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 293
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 34, 66

Conread position: 1-431
Cow position: chr21:38918078-38918488 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 305
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 171, 40

Conread position: 1-433
Cow position: chr21:10005022-10004595 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 58

Conread position: 1-434
Cow position: chr21:22856078-22856511 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 307
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 159, 91

Conread position: 1-434
Cow position: chr21:27521465-27521052 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 293
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 268, 40

Conread position: 1-435
Cow position: chr21:10263904-10264328 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 40

Conread position: 1-436
Cow position: chr21:17637762-17638185 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 90

Conread position: 1-437
Cow position: chr21:44114266-44113844 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 299
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 152, 15

Conread position: 1-438
Cow position: chr21:34653945-34654365 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 30

Conread position: 1-440
Cow position: chr21:13048333-13047893 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 44

Conread position: 2-164
Cow position: chr21:5344519-5344669 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 2-229
Cow position: chr21:39450304-39450080 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 164, 88

Conread position: 2-273
Cow position: chr21:17856408-17856670 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 166, 89

Conread position: 2-279
Cow position: chr21:43357399-43357124 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 211
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 163, 43

Conread position: 2-286
Cow position: chr21:39401459-39401729 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 166, 41

Conread position: 2-297
Cow position: chr21:18845155-18844862 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 218
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 33, 97

Conread position: 2-320
Cow position: chr21:38120972-38121276 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 242
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 168, 46

Conread position: 2-322
Cow position: chr21:15611016-15611317 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 223
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 95, 36

Conread position: 2-360
Cow position: chr21:9990377-9990726 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 95

Conread position: 2-394
Cow position: chr21:3361150-3360767 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 69

Conread position: 2-397
Cow position: chr21:22860866-22861244 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 41

Conread position: 2-397
Cow position: chr21:39664524-39664146 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 263
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 169, 43

Conread position: 2-399
Cow position: chr21:7564458-7564064 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 278
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 164, 65

Conread position: 2-400
Cow position: chr21:20160548-20160933 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 30

Conread position: 2-400
Cow position: chr21:23822032-23822407 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 283
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 268, 33

Conread position: 2-403
Cow position: chr21:12462106-12461711 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 44

Conread position: 2-408
Cow position: chr21:47009375-47008984 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 277
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 163, 43

Conread position: 2-409
Cow position: chr21:6051371-6051769 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 57

Conread position: 2-409
Cow position: chr21:20260456-20260033 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 27

Conread position: 2-411
Cow position: chr21:81935-82325 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 70

Conread position: 2-411
Cow position: chr21:30592439-30592048 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 36

Conread position: 2-434
Cow position: chr21:5595524-5595919 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 292
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 267, 69

Conread position: 3-332
Cow position: chr21:1058942-1059262 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 239
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 163, 54

Conread position: 3-340
Cow position: chr21:13365210-13365538 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 249
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 148, 40

Conread position: 3-340
Cow position: chr21:37345236-37344904 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 242
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 163, 50

Conread position: 3-396
Cow position: chr21:8351439-8351043 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 32

Conread position: 3-397
Cow position: chr21:22194245-22193842 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 289
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 163, 35

Conread position: 3-403
Cow position: chr21:42135758-42135361 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 92

Conread position: 3-410
Cow position: chr21:39403673-39403263 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 55

Conread position: 3-437
Cow position: chr21:29002296-29001855 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 94

Conread position: 4-225
Cow position: chr21:27743608-27743826 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 162, 56

Conread position: 4-340
Cow position: chr21:42384372-42384703 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 167, 88

Conread position: 4-448
Cow position: chr21:4399666-4400097 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 309
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 162, 41

Conread position: 5-289
Cow position: chr21:30607220-30606944 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 212
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 161, 36

Conread position: 5-340
Cow position: chr21:46264042-46264364 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 246
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 163, 39

Conread position: 5-397
Cow position: chr21:30231834-30231444 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 94

Conread position: 5-398
Cow position: chr21:7785093-7785473 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 266
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 158, 89

Conread position: 5-411
Cow position: chr21:15545503-15545096 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 280
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 32, 52

Conread position: 5-411
Cow position: chr21:15584546-15584157 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 278
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 161, 42

Conread position: 5-411
Cow position: chr21:24296897-24296499 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 271
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 103, 30

Conread position: 7-437
Cow position: chr21:27668881-27669303 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 282
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 144, 38

Conread position: 8-279
Cow position: chr21:22353364-22353105 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 183
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 152, 89

Conread position: 8-370
Cow position: chr21:4905102-4904739 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 249
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 158, 84

Conread position: 8-389
Cow position: chr21:1483360-1483718 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 257
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 261, 84

Conread position: 8-396
Cow position: chr21:34151451-34151827 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 273
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 158, 35

Conread position: 9-370
Cow position: chr21:19258698-19259041 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 250
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 260, 39

Conread position: 9-426
Cow position: chr21:9477030-9477448 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 277
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 93, 102

Conread position: 10-336
Cow position: chr21:26648134-26647826 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 221
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 28

Conread position: 10-411
Cow position: chr21:46911-47314 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 289
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 155, 51

Conread position: 10-411
Cow position: chr21:27229922-27229538 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 33

Conread position: 11-263
Cow position: chr21:24607259-24607501 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 177
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 56, 82

Conread position: 11-411
Cow position: chr21:27810278-27810658 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 86

Conread position: 12-412
Cow position: chr21:34663498-34663886 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 263
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 142, 13

Conread position: 17-397
Cow position: chr21:16152310-16152692 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 270
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 148, 40

Conread position: 18-141
Cow position: chr21:27712338-27712219 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 18-336
Cow position: chr21:15976515-15976822 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 230
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 148, 27

Conread position: 18-411
Cow position: chr21:30222222-30222608 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 43

Conread position: 18-433
Cow position: chr21:18155693-18155278 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 74

Conread position: 19-409
Cow position: chr21:23980305-23979915 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 76

Conread position: 20-286
Cow position: chr21:20418806-20418543 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 146, 72

Conread position: 20-348
Cow position: chr21:36297368-36297698 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 102

Conread position: 20-383
Cow position: chr21:6624037-6624397 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 248
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 147, 51

Conread position: 24-436
Cow position: chr21:24343382-24342976 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 273
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 136, 68

Conread position: 25-408
Cow position: chr21:32559471-32559108 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 48

Conread position: 26-326
Cow position: chr21:21077486-21077780 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 199
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 243, 66

Conread position: 28-411
Cow position: chr21:12916539-12916153 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 260
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 137, 64

Conread position: 29-409
Cow position: chr21:10673023-10673374 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 257
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 240, 16

Conread position: 30-314
Cow position: chr21:35354422-35354702 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 157, 67

Conread position: 30-408
Cow position: chr21:32339849-32339482 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 265
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 141, 64

Conread position: 31-411
Cow position: chr21:23535603-23535979 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 270
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 147, 61

Conread position: 31-433
Cow position: chr21:9698193-9697791 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 273
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 134, 25

Conread position: 32-277
Cow position: chr21:10601483-10601245 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 77, 134

Conread position: 33-259
Cow position: chr21:18041956-18041736 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 135, 62

Conread position: 33-403
Cow position: chr21:30849053-30848690 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 258
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 21, 38

Conread position: 33-409
Cow position: chr21:36762935-36763326 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 264
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 33

Conread position: 34-394
Cow position: chr21:10561687-10561336 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 261
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 131, 11

Conread position: 35-401
Cow position: chr21:37790110-37789746 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 255
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 9, 46

Conread position: 35-408
Cow position: chr21:16914669-16915044 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 257
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 140, 57

Conread position: 36-399
Cow position: chr21:48637866-48637501 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 256
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 12, 51

Conread position: 39-332
Cow position: chr21:22465095-22465376 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 200
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 230, 59

Conread position: 39-409
Cow position: chr21:10816920-10817298 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 245
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 72

Conread position: 43-337
Cow position: chr21:26244825-26245105 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 123, 22

Conread position: 43-409
Cow position: chr21:13585167-13584788 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 258
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 52, 83

Conread position: 43-409
Cow position: chr21:38728067-38728420 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 247
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 230, 14

Conread position: 47-409
Cow position: chr21:6017521-6017895 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 249
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 5, 46

Conread position: 48-411
Cow position: chr21:45906714-45906354 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 250
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 207, 62

Conread position: 49-283
Cow position: chr21:44515172-44515400 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 183
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 119, 13

Conread position: 49-400
Cow position: chr21:30835270-30835621 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 259
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 119, 43

Conread position: 49-403
Cow position: chr21:6997846-6998199 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 255
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 117, 37

Conread position: 49-407
Cow position: chr21:44658490-44658823 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 247
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 126, 48

Conread position: 52-396
Cow position: chr21:28237803-28237448 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 246
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 114, 37

Conread position: 52-403
Cow position: chr21:22210333-22209985 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 242
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 116, 54

Conread position: 52-411
Cow position: chr21:33580324-33580677 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 243
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 116, 26

Conread position: 60-429
Cow position: chr21:10858735-10859092 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 254
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 209, 32

Conread position: 62-407
Cow position: chr21:47714086-47713745 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 250
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 104, 13

Conread position: 64-433
Cow position: chr21:47719376-47719018 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 263
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 45, 86

Conread position: 70-409
Cow position: chr21:19060168-19059827 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 38

Conread position: 71-443
Cow position: chr21:40266051-40266423 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 258
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 95, 20

Conread position: 72-409
Cow position: chr21:44214055-44214375 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 246
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 36, 48

Conread position: 72-432
Cow position: chr21:25344788-25345151 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 257
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 24, 98

Conread position: 74-320
Cow position: chr21:35899768-35900016 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 33

Conread position: 76-403
Cow position: chr21:11779602-11779280 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 224
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 88, 22

Conread position: 79-411
Cow position: chr21:8426379-8426709 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 46

Conread position: 84-360
Cow position: chr21:977212-976925 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 187
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 74, 30

Conread position: 87-434
Cow position: chr21:38564615-38564958 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 229
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 104, 20

Conread position: 88-407
Cow position: chr21:22850872-22851177 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 234
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 181, 19

Conread position: 88-437
Cow position: chr21:5464682-5465044 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 247
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 20, 65

Conread position: 89-430
Cow position: chr21:45971232-45970895 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 224
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 81, 18

Conread position: 90-339
Cow position: chr21:29014622-29014365 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 78, 54

Conread position: 90-408
Cow position: chr21:742227-742537 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 234
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 35, 19

Conread position: 95-433
Cow position: chr21:10743338-10743675 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 229
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 23, 12

Conread position: 99-326
Cow position: chr21:45262866-45262628 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 185
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 10, 54

Conread position: 99-388
Cow position: chr21:829255-828967 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 27

Conread position: 104-411
Cow position: chr21:29014961-29014651 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 211
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 46

Conread position: 107-403
Cow position: chr21:15544263-15543981 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 201
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 44

Conread position: 107-406
Cow position: chr21:36910695-36910998 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 200
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 45

Conread position: 107-407
Cow position: chr21:1511246-1511549 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 214
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 58, 45

Conread position: 107-409
Cow position: chr21:28919569-28919267 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 216
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 59, 45

Conread position: 107-410
Cow position: chr21:18060001-18059694 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 206
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 63, 37

Conread position: 107-410
Cow position: chr21:41140762-41140450 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 210
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 56, 45

Conread position: 107-411
Cow position: chr21:7394337-7394634 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 209
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 43

Conread position: 107-411
Cow position: chr21:17890258-17890569 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 216
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 59, 45

Conread position: 108-356
Cow position: chr21:297709-297952 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 195
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 59, 25

Conread position: 108-406
Cow position: chr21:8349284-8349583 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 225
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 60, 44

Conread position: 108-408
Cow position: chr21:22014143-22014454 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 43

Conread position: 108-426
Cow position: chr21:16569857-16570168 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 229
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 58, 45

Conread position: 110-340
Cow position: chr21:43259181-43259413 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 156
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 55, 43

Conread position: 110-399
Cow position: chr21:868967-868665 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 55, 43

Conread position: 110-409
Cow position: chr21:41522449-41522149 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 72, 45

Conread position: 111-440
Cow position: chr21:27677445-27677778 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 220
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 57, 76

Conread position: 115-399
Cow position: chr21:16604349-16604060 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 200
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 82, 36

Conread position: 119-410
Cow position: chr21:10657135-10656836 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 200
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 33

Conread position: 123-411
Cow position: chr21:10072124-10072432 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 205
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 125-411
Cow position: chr21:36696117-36695825 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 201
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 41, 27

Conread position: 126-437
Cow position: chr21:38720226-38720538 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 199
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 65, 26

Conread position: 127-407
Cow position: chr21:14126263-14126534 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 58, 14

Conread position: 127-407
Cow position: chr21:28030263-28030541 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 25

Conread position: 127-410
Cow position: chr21:12354718-12354437 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 17, 69

Conread position: 128-403
Cow position: chr21:47383582-47383291 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 19, 37

Conread position: 133-437
Cow position: chr21:8431121-8430798 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 220
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 11

Conread position: 133-442
Cow position: chr21:13656654-13656339 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 211
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 48, 19

Conread position: 138-408
Cow position: chr21:802321-802060 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 14

Conread position: 145-292
Cow position: chr21:20183064-20183216 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 7

Conread position: 145-337
Cow position: chr21:30980585-30980387 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 7

Conread position: 145-339
Cow position: chr21:11057882-11057686 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 10

Conread position: 145-408
Cow position: chr21:674677-674931 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 34, 7

Conread position: 151-358
Cow position: chr21:28599887-28600096 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 95

Conread position: 158-398
Cow position: chr21:11625754-11625999 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 162
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 111, 28

Conread position: 163-403
Cow position: chr21:46599375-46599616 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 27, 16

Conread position: 163-408
Cow position: chr21:12104380-12104616 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 78, 144

Conread position: 163-408
Cow position: chr21:36682337-36682589 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 187
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 13, 161

Conread position: 163-411
Cow position: chr21:28907528-28907283 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 106, 23

Conread position: 168-397
Cow position: chr21:13588783-13589014 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 70

Conread position: 168-408
Cow position: chr21:16793810-16794057 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 171
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 62, 25

Conread position: 168-410
Cow position: chr21:6851192-6851430 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 101, 151

Conread position: 168-410
Cow position: chr21:31279279-31279518 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 101, 11

Conread position: 168-412
Cow position: chr21:13842510-13842760 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 166
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 102, 24

Conread position: 169-340
Cow position: chr21:19360156-19359982 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 11, 153

Conread position: 169-396
Cow position: chr21:41287773-41287545 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 9, 159

Conread position: 170-407
Cow position: chr21:44829735-44829494 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 99, 16

Conread position: 170-409
Cow position: chr21:21615805-21616040 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 181
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 11, 24

Conread position: 170-411
Cow position: chr21:8713937-8713691 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 164
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 19, 9

Conread position: 170-411
Cow position: chr21:19868931-19868696 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 99, 9

Conread position: 170-426
Cow position: chr21:17252953-17252696 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 12

Conread position: 170-435
Cow position: chr21:10130166-10130435 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 23

Conread position: 171-410
Cow position: chr21:7169711-7169952 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 32, 21

Conread position: 171-410
Cow position: chr21:19624421-19624668 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 16, 85

Conread position: 171-411
Cow position: chr21:11174262-11174511 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 8, 21

Conread position: 172-412
Cow position: chr21:42328642-42328394 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 9

Conread position: 172-427
Cow position: chr21:19561546-19561281 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 177
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 173-406
Cow position: chr21:46809744-46809503 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 9

Conread position: 174-411
Cow position: chr21:20163734-20163974 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 185
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 8, 18

Conread position: 175-396
Cow position: chr21:24266539-24266310 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 44

Conread position: 175-409
Cow position: chr21:17519049-17519292 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 94, 17

Conread position: 175-436
Cow position: chr21:26018406-26018671 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 94, 105

Conread position: 176-385
Cow position: chr21:9819501-9819287 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 154

Conread position: 176-399
Cow position: chr21:19240845-19240624 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 93, 183

Conread position: 176-403
Cow position: chr21:36508266-36508488 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 93, 61

Conread position: 176-409
Cow position: chr21:19702758-19702994 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 134

Conread position: 176-409
Cow position: chr21:40475526-40475765 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 14, 50

Conread position: 176-409
Cow position: chr21:44724342-44724112 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 128

Conread position: 178-408
Cow position: chr21:16498549-16498778 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 67

Conread position: 178-409
Cow position: chr21:41546738-41546971 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 161
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 11, 35

Conread position: 179-330
Cow position: chr21:46451921-46451770 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 90, 35

Conread position: 181-406
Cow position: chr21:24797690-24797916 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 88, 66

Conread position: 181-427
Cow position: chr21:48334757-48334503 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 88, 31

Conread position: 182-410
Cow position: chr21:41610201-41610444 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 184-407
Cow position: chr21:11678268-11678060 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 17, 47

Conread position: 184-408
Cow position: chr21:71623-71849 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 106

Conread position: 184-409
Cow position: chr21:39393784-39394013 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 178
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 85, 138

Conread position: 186-411
Cow position: chr21:13580451-13580681 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 152
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 188-295
Cow position: chr21:7088640-7088748 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 188-431
Cow position: chr21:29658316-29658559 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 116, 139

Conread position: 190-403
Cow position: chr21:24875394-24875610 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 141

Conread position: 191-340
Cow position: chr21:5342051-5341899 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 78, 130

Conread position: 195-411
Cow position: chr21:700745-700522 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 74, 0

Conread position: 196-340
Cow position: chr21:14228232-14228086 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 73, 125

Conread position: 197-403
Cow position: chr21:27712194-27711976 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 197-416
Cow position: chr21:37928698-37928922 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 72, 184

Conread position: 198-370
Cow position: chr21:30243631-30243460 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 71, 105

Conread position: 198-398
Cow position: chr21:3415704-3415910 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 198-409
Cow position: chr21:30938622-30938402 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 199-396
Cow position: chr21:14360416-14360619 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 199-409
Cow position: chr21:9905798-9905598 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 38

Conread position: 199-409
Cow position: chr21:18721054-18720841 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 13

Conread position: 199-409
Cow position: chr21:25014975-25014776 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 31

Conread position: 199-422
Cow position: chr21:40291695-40291473 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 15

Conread position: 200-403
Cow position: chr21:2537087-2536878 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 200-409
Cow position: chr21:40820801-40820587 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 69, 0

Conread position: 200-411
Cow position: chr21:30145576-30145365 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 94

Conread position: 201-408
Cow position: chr21:25012135-25012341 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 68, 125

Conread position: 201-433
Cow position: chr21:11182606-11182837 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 68, 118

Conread position: 202-427
Cow position: chr21:13303846-13304078 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 154
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 202-431
Cow position: chr21:17155898-17155664 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 67, 218

Conread position: 202-436
Cow position: chr21:15012493-15012723 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 186
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 67, 119

Conread position: 204-396
Cow position: chr21:19161768-19161966 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 206-407
Cow position: chr21:8506488-8506285 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 63, 121

Conread position: 206-407
Cow position: chr21:8509376-8509173 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 63, 121

Conread position: 207-437
Cow position: chr21:48482469-48482239 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 62, 33

Conread position: 208-434
Cow position: chr21:22211312-22211543 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 8, 212

Conread position: 210-408
Cow position: chr21:20174380-20174575 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 156
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 59, 118

Conread position: 210-408
Cow position: chr21:30657932-30658124 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 62, 117

Conread position: 210-409
Cow position: chr21:10751106-10751310 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 138
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 213-434
Cow position: chr21:15869756-15869973 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 56, 5

Conread position: 217-409
Cow position: chr21:13883550-13883741 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 115

Conread position: 217-411
Cow position: chr21:11743435-11743228 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 52, 202

Conread position: 218-434
Cow position: chr21:27409662-27409449 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 78

Conread position: 219-397
Cow position: chr21:8494710-8494895 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 220-396
Cow position: chr21:18783397-18783215 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 130

Conread position: 220-408
Cow position: chr21:4108847-4109040 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 52, 135

Conread position: 220-409
Cow position: chr21:8986094-8986290 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 23

Conread position: 220-409
Cow position: chr21:12348837-12349032 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 73

Conread position: 220-411
Cow position: chr21:745247-745436 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 72

Conread position: 220-433
Cow position: chr21:8959562-8959782 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 148
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 224-402
Cow position: chr21:39845670-39845859 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 12

Conread position: 225-409
Cow position: chr21:14247212-14247400 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 22

Conread position: 226-412
Cow position: chr21:31659072-31658887 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 6, 15

Conread position: 227-441
Cow position: chr21:11340464-11340686 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 232-409
Cow position: chr21:15271353-15271175 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 37, 153

Conread position: 237-407
Cow position: chr21:6291835-6292011 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 237-411
Cow position: chr21:28882270-28882449 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 59

Conread position: 238-403
Cow position: chr21:7460697-7460863 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 31, 94

Conread position: 238-434
Cow position: chr21:7357632-7357832 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 185

Conread position: 239-437
Cow position: chr21:19394791-19394587 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 8

Conread position: 241-400
Cow position: chr21:37495853-37495689 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 27, 112

Conread position: 241-409
Cow position: chr21:44732950-44732779 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 139
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 28, 10

Conread position: 241-434
Cow position: chr21:646224-646026 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 242-403
Cow position: chr21:29011876-29011718 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 19

Conread position: 242-409
Cow position: chr21:27744119-27744293 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 242-411
Cow position: chr21:40930381-40930212 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 28, 85

Conread position: 242-433
Cow position: chr21:3135775-3135579 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 139

Conread position: 242-437
Cow position: chr21:7539434-7539232 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 27, 179

Conread position: 243-411
Cow position: chr21:15305204-15305029 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 244-410
Cow position: chr21:31462658-31462822 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 84

Conread position: 247-410
Cow position: chr21:18056030-18055864 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 22, 0

Conread position: 248-403
Cow position: chr21:16120061-16119904 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 131

Conread position: 248-441
Cow position: chr21:45537284-45537485 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 178

Conread position: 249-409
Cow position: chr21:45376049-45376211 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 20, 78

Conread position: 256-437
Cow position: chr21:39278189-39278000 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 40

Conread position: 259-409
Cow position: chr21:12473949-12473798 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 259-431
Cow position: chr21:5789473-5789645 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 146, 42

Conread position: 261-408
Cow position: chr21:17856878-17857028 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 267-443
Cow position: chr21:42341818-42341641 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 63

Conread position: 268-409
Cow position: chr21:11761684-11761826 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 58

Conread position: 268-437
Cow position: chr21:30368197-30368369 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 52

Conread position: 270-409
Cow position: chr21:37479470-37479326 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 31, 56

Conread position: 273-409
Cow position: chr21:13488678-13488819 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 288-411
Cow position: chr21:35337782-35337659 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 56

Conread position: 303-409
Cow position: chr21:41668787-41668892 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 303-411
Cow position: chr21:20165938-20166048 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 27, 0

Show alignments to all cow chromosomes.