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Cow genome map

           
Conread name:
           
Ova1-OVRM10133B11
        

               
Conread position:
               
1-159
               

               
Cow position:
               
chr24:11006991-11007138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr24:16625725-16625565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
88, 47
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr24:40908792-40908992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
165, 15
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr24:39219071-39218841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
36, 46
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr24:35794964-35794728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
165, 96
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr24:30178012-30178250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
107, 31
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr24:27052719-27052481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
165, 42
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr24:7023170-7023440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
107, 152
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr24:34532899-34533135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr24:20024383-20024644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
191, 91
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr24:201859-201572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
168, 64
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr24:3430511-3430813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
165, 24
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr24:26732223-26732536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr24:43364139-43364445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
165, 28
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr24:27824240-27824550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
129, 29
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr24:31324055-31324372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
127, 47
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr24:24250508-24250812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
167, 40
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr24:27748425-27748743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
268, 34
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr24:33222164-33221829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
165, 47
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr24:27290651-27290979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
158, 46
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr24:29673295-29673628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
164, 44
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr24:44809020-44809373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
151, 63
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr24:17955671-17955324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
167, 93
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr24:18025196-18024836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
173, 91
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr24:5754617-5754967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 19
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr24:9222600-9222225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
188, 93
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr24:20942945-20943315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
165, 14
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr24:27299946-27300316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
268, 49
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr24:32693478-32693877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
92, 185
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr24:31816361-31816736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 73
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr24:18741795-18741402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
170, 43
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr24:15246859-15246494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
67, 42
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr24:27096461-27096855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
155, 41
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr24:25320765-25321150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 88
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr24:40129898-40130301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
167, 40
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr24:37299060-37298676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
229, 17
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr24:35073868-35074250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
165, 44
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr24:17860475-17860092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
183, 34
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr24:18374550-18374934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 96
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr24:37650446-37650845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 34
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr24:25885382-25884975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
165, 23
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr24:33944183-33944579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
165, 17
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr24:11886933-11887327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 96
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr24:27608322-27607937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 34
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr24:35985943-35985559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
170, 18
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr24:44869790-44870169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr24:16994669-16995053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
78, 37
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr24:27844744-27844358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 44
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr24:28062721-28063125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 99
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr24:33372326-33372721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 90
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr24:2391967-2392363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
217, 91
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr24:3493668-3494057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
268, 34
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr24:10498986-10499394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 96
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr24:18485224-18484815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 61
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr24:19179669-19179260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
105, 9
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr24:22114515-22114905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr24:25194042-25194442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 61
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr24:27039814-27040226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 106
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr24:29606291-29605857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
103, 48
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr24:30484168-30483768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
165, 32
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr24:33098712-33098296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
87, 37
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr24:33621710-33621302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
108, 62
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr24:40300931-40301336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 41
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr24:41980889-41980484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
173, 37
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr24:7913774-7914186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 93
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr24:11839954-11840361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 43
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr24:21519215-21519607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
136, 28
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr24:15057178-15057562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
73, 41
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr24:17285222-17284805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
88, 108
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr24:18732347-18731931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 17
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr24:18734580-18734202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
169, 93
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr24:23695121-23694733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 105
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr24:26929173-26928763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
168, 93
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr24:28699833-28700221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
170, 42
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr24:30229244-30229652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 57
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr24:32609414-32609827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
170, 91
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr24:35675319-35675709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 76
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr24:43371024-43371420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 46
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr24:28721663-28722057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
42, 56
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr24:30235645-30236065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 151
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr24:17311433-17311031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 56
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr24:32205018-32204589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
165, 52
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr24:15861825-15861391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
157, 42
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr24:34272578-34273020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
38, 26
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr24:27267411-27267812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
165, 29
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr24:28303573-28303159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
296, 42
               

               
Conread position:
               
1-436
               

               
Cow position:
               
chr24:41985752-41986178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
91, 58
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr24:30314260-30313817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 95
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr24:38347456-38347880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
268, 52
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr24:18343824-18344269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 49
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr24:24491235-24490821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 28
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr24:10841439-10841176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
159, 25
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr24:591687-591936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
7, 44
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr24:40849935-40850255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
164, 46
               

               
Conread position:
               
2-369
               

               
Cow position:
               
chr24:20250127-20249757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
164, 90
               

               
Conread position:
               
2-372
               

               
Cow position:
               
chr24:31359099-31359457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 95
               

               
Conread position:
               
2-388
               

               
Cow position:
               
chr24:17294410-17294040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
238, 41
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr24:36174006-36173613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
180, 63
               

               
Conread position:
               
2-403
               

               
Cow position:
               
chr24:29596039-29595630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
24, 83
               

               
Conread position:
               
2-409
               

               
Cow position:
               
chr24:24755226-24755605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
128, 41
               

               
Conread position:
               
2-409
               

               
Cow position:
               
chr24:27906211-27906614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 90
               

               
Conread position:
               
2-409
               

               
Cow position:
               
chr24:34761670-34762072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
180, 90
               

               
Conread position:
               
2-409
               

               
Cow position:
               
chr24:35332495-35332904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
150, 43
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr24:44041232-44040834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
164, 39
               

               
Conread position:
               
2-429
               

               
Cow position:
               
chr24:38814748-38815170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
164, 42
               

               
Conread position:
               
2-441
               

               
Cow position:
               
chr24:31811961-31812392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 95
               

               
Conread position:
               
3-323
               

               
Cow position:
               
chr24:28319422-28319118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
266, 31
               

               
Conread position:
               
3-334
               

               
Cow position:
               
chr24:43927544-43927233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
186, 45
               

               
Conread position:
               
3-403
               

               
Cow position:
               
chr24:11119060-11119464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
63, 29
               

               
Conread position:
               
3-403
               

               
Cow position:
               
chr24:24457469-24457072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
157, 30
               

               
Conread position:
               
3-404
               

               
Cow position:
               
chr24:29540133-29539759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 94
               

               
Conread position:
               
3-409
               

               
Cow position:
               
chr24:2402598-2402201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 44
               

               
Conread position:
               
3-411
               

               
Cow position:
               
chr24:211759-212148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 94
               

               
Conread position:
               
3-438
               

               
Cow position:
               
chr24:1269582-1269983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 32
               

               
Conread position:
               
3-438
               

               
Cow position:
               
chr24:6102600-6103027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
155, 60
               

               
Conread position:
               
4-409
               

               
Cow position:
               
chr24:16509751-16510147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
162, 31
               

               
Conread position:
               
5-330
               

               
Cow position:
               
chr24:29063867-29063563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
8, 43
               

               
Conread position:
               
5-396
               

               
Cow position:
               
chr24:23556551-23556174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
156, 87
               

               
Conread position:
               
5-403
               

               
Cow position:
               
chr24:39850099-39849722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
272, 66
               

               
Conread position:
               
5-409
               

               
Cow position:
               
chr24:18474969-18474553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 155
               

               
Conread position:
               
5-463
               

               
Cow position:
               
chr24:17407169-17407622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
30, 55
               

               
Conread position:
               
6-373
               

               
Cow position:
               
chr24:20874457-20874820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 91
               

               
Conread position:
               
6-401
               

               
Cow position:
               
chr24:39833735-39833370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 90
               

               
Conread position:
               
6-420
               

               
Cow position:
               
chr24:28496806-28496397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 91
               

               
Conread position:
               
8-421
               

               
Cow position:
               
chr24:22079239-22079651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
123, 84
               

               
Conread position:
               
8-430
               

               
Cow position:
               
chr24:39143388-39143807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
158, 13
               

               
Conread position:
               
10-336
               

               
Cow position:
               
chr24:15373194-15373509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
10-409
               

               
Cow position:
               
chr24:5633252-5632852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
150, 82
               

               
Conread position:
               
10-409
               

               
Cow position:
               
chr24:36404363-36403980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 86
               

               
Conread position:
               
11-431
               

               
Cow position:
               
chr24:43028540-43028128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 104
               

               
Conread position:
               
12-382
               

               
Cow position:
               
chr24:28990351-28990711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 55
               

               
Conread position:
               
12-403
               

               
Cow position:
               
chr24:17104779-17104402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 29
               

               
Conread position:
               
13-335
               

               
Cow position:
               
chr24:34008793-34008472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
152, 20
               

               
Conread position:
               
18-302
               

               
Cow position:
               
chr24:15707650-15707378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
148, 27
               

               
Conread position:
               
18-394
               

               
Cow position:
               
chr24:7476557-7476189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
150, 18
               

               
Conread position:
               
20-409
               

               
Cow position:
               
chr24:43365643-43366011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
250, 30
               

               
Conread position:
               
21-271
               

               
Cow position:
               
chr24:6487715-6487952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
168, 76
               

               
Conread position:
               
21-411
               

               
Cow position:
               
chr24:20801548-20801167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
153, 22
               

               
Conread position:
               
22-190
               

               
Cow position:
               
chr24:29708007-29707844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
144, 23
               

               
Conread position:
               
22-400
               

               
Cow position:
               
chr24:6132080-6131720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 75
               

               
Conread position:
               
23-412
               

               
Cow position:
               
chr24:16089030-16089408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
246, 69
               

               
Conread position:
               
25-397
               

               
Cow position:
               
chr24:13626078-13626450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
140, 67
               

               
Conread position:
               
26-409
               

               
Cow position:
               
chr24:28600067-28599698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
26-411
               

               
Cow position:
               
chr24:7744527-7744899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
53, 74
               

               
Conread position:
               
32-317
               

               
Cow position:
               
chr24:30897735-30897454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
136, 65
               

               
Conread position:
               
33-284
               

               
Cow position:
               
chr24:17434415-17434659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 63
               

               
Conread position:
               
33-340
               

               
Cow position:
               
chr24:19769297-19769601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
236, 61
               

               
Conread position:
               
33-411
               

               
Cow position:
               
chr24:44987579-44987192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
133, 59
               

               
Conread position:
               
34-340
               

               
Cow position:
               
chr24:14171889-14171588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
132, 58
               

               
Conread position:
               
34-409
               

               
Cow position:
               
chr24:25756481-25756122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
157, 19
               

               
Conread position:
               
34-427
               

               
Cow position:
               
chr24:24155700-24155316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
235, 58
               

               
Conread position:
               
41-336
               

               
Cow position:
               
chr24:32070778-32071063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
97, 51
               

               
Conread position:
               
43-340
               

               
Cow position:
               
chr24:18970691-18970401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
123, 16
               

               
Conread position:
               
43-369
               

               
Cow position:
               
chr24:17833000-17832684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
125, 49
               

               
Conread position:
               
43-370
               

               
Cow position:
               
chr24:26554787-26554457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
125, 49
               

               
Conread position:
               
43-397
               

               
Cow position:
               
chr24:41423423-41423760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
159, 49
               

               
Conread position:
               
43-408
               

               
Cow position:
               
chr24:27726199-27725833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
157, 34
               

               
Conread position:
               
43-411
               

               
Cow position:
               
chr24:27220277-27219910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
140, 52
               

               
Conread position:
               
43-422
               

               
Cow position:
               
chr24:16645512-16645129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
123, 18
               

               
Conread position:
               
43-432
               

               
Cow position:
               
chr24:37024837-37025214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
226, 49
               

               
Conread position:
               
43-438
               

               
Cow position:
               
chr24:21606847-21606473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
146, 49
               

               
Conread position:
               
45-411
               

               
Cow position:
               
chr24:19800662-19801017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
121, 47
               

               
Conread position:
               
48-340
               

               
Cow position:
               
chr24:31159439-31159721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
49-399
               

               
Cow position:
               
chr24:29586813-29587166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
109, 43
               

               
Conread position:
               
52-409
               

               
Cow position:
               
chr24:12200590-12200232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
116, 40
               

               
Conread position:
               
52-409
               

               
Cow position:
               
chr24:18357230-18356881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 56
               

               
Conread position:
               
53-385
               

               
Cow position:
               
chr24:25092354-25092676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
216, 39
               

               
Conread position:
               
53-388
               

               
Cow position:
               
chr24:6912527-6912203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
216, 57
               

               
Conread position:
               
53-431
               

               
Cow position:
               
chr24:37037723-37038087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
115, 40
               

               
Conread position:
               
57-339
               

               
Cow position:
               
chr24:23187089-23186811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
108, 39
               

               
Conread position:
               
57-351
               

               
Cow position:
               
chr24:24061974-24061691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
223, 35
               

               
Conread position:
               
60-401
               

               
Cow position:
               
chr24:27630234-27630567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
129, 32
               

               
Conread position:
               
60-408
               

               
Cow position:
               
chr24:35576704-35576362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
83, 32
               

               
Conread position:
               
61-410
               

               
Cow position:
               
chr24:9036028-9036365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
204, 31
               

               
Conread position:
               
82-334
               

               
Cow position:
               
chr24:8006153-8006406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
82, 68
               

               
Conread position:
               
83-409
               

               
Cow position:
               
chr24:32054506-32054820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
83, 16
               

               
Conread position:
               
87-322
               

               
Cow position:
               
chr24:24662283-24662042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 40
               

               
Conread position:
               
87-435
               

               
Cow position:
               
chr24:32739423-32739062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 61
               

               
Conread position:
               
93-403
               

               
Cow position:
               
chr24:28233900-28234211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 61
               

               
Conread position:
               
95-408
               

               
Cow position:
               
chr24:14550653-14550965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
89, 149
               

               
Conread position:
               
95-409
               

               
Cow position:
               
chr24:42364103-42364412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
174, 13
               

               
Conread position:
               
105-435
               

               
Cow position:
               
chr24:20594402-20594749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
5, 46
               

               
Conread position:
               
107-312
               

               
Cow position:
               
chr24:19736462-19736255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
89, 56
               

               
Conread position:
               
107-395
               

               
Cow position:
               
chr24:35631854-35632143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
154, 46
               

               
Conread position:
               
107-398
               

               
Cow position:
               
chr24:4724842-4725124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
64, 45
               

               
Conread position:
               
107-398
               

               
Cow position:
               
chr24:5397323-5397037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
162, 23
               

               
Conread position:
               
107-409
               

               
Cow position:
               
chr24:389968-390276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
58, 45
               

               
Conread position:
               
107-411
               

               
Cow position:
               
chr24:2359309-2359007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
136, 45
               

               
Conread position:
               
107-440
               

               
Cow position:
               
chr24:23863767-23863420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
59, 43
               

               
Conread position:
               
108-323
               

               
Cow position:
               
chr24:43967633-43967413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
80, 44
               

               
Conread position:
               
108-403
               

               
Cow position:
               
chr24:27713536-27713240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
62, 28
               

               
Conread position:
               
109-399
               

               
Cow position:
               
chr24:36008355-36008652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
57, 41
               

               
Conread position:
               
110-377
               

               
Cow position:
               
chr24:42004046-42004316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
64, 48
               

               
Conread position:
               
110-409
               

               
Cow position:
               
chr24:13352914-13353202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
158, 53
               

               
Conread position:
               
111-340
               

               
Cow position:
               
chr24:14648479-14648253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
158, 39
               

               
Conread position:
               
113-397
               

               
Cow position:
               
chr24:29561701-29561415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
54, 31
               

               
Conread position:
               
114-408
               

               
Cow position:
               
chr24:39523573-39523275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
57, 38
               

               
Conread position:
               
118-432
               

               
Cow position:
               
chr24:37267539-37267862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
48, 31
               

               
Conread position:
               
119-340
               

               
Cow position:
               
chr24:39791418-39791648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
51, 33
               

               
Conread position:
               
123-409
               

               
Cow position:
               
chr24:37975098-37974807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 202
               

               
Conread position:
               
127-392
               

               
Cow position:
               
chr24:25263852-25263577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
129-431
               

               
Cow position:
               
chr24:3656477-3656168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
129-437
               

               
Cow position:
               
chr24:15353343-15353649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
140, 21
               

               
Conread position:
               
131-409
               

               
Cow position:
               
chr24:20364518-20364240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 16
               

               
Conread position:
               
136-409
               

               
Cow position:
               
chr24:230172-230456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 16
               

               
Conread position:
               
145-340
               

               
Cow position:
               
chr24:30308652-30308448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 7
               

               
Conread position:
               
145-346
               

               
Cow position:
               
chr24:28042877-28043087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
23, 7
               

               
Conread position:
               
145-409
               

               
Cow position:
               
chr24:37823433-37823700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 7
               

               
Conread position:
               
145-410
               

               
Cow position:
               
chr24:18755661-18755937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
22, 7
               

               
Conread position:
               
145-429
               

               
Cow position:
               
chr24:8392778-8393063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
124, 5
               

               
Conread position:
               
145-432
               

               
Cow position:
               
chr24:28600534-28600239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
146-435
               

               
Cow position:
               
chr24:13948027-13948323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 6
               

               
Conread position:
               
149-400
               

               
Cow position:
               
chr24:5360639-5360878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
120, 5
               

               
Conread position:
               
150-427
               

               
Cow position:
               
chr24:23575248-23574967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
119, 269
               

               
Conread position:
               
151-408
               

               
Cow position:
               
chr24:28510717-28510966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
118, 12
               

               
Conread position:
               
152-408
               

               
Cow position:
               
chr24:20807446-20807699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 173
               

               
Conread position:
               
162-409
               

               
Cow position:
               
chr24:27284747-27285000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
107, 72
               

               
Conread position:
               
163-409
               

               
Cow position:
               
chr24:43536880-43537136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
164-411
               

               
Cow position:
               
chr24:43598944-43598702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
167-409
               

               
Cow position:
               
chr24:8676754-8677001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
102, 133
               

               
Conread position:
               
168-403
               

               
Cow position:
               
chr24:2992945-2992710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
101, 22
               

               
Conread position:
               
168-411
               

               
Cow position:
               
chr24:42984324-42984573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
101, 24
               

               
Conread position:
               
169-408
               

               
Cow position:
               
chr24:27349242-27349001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
24, 76
               

               
Conread position:
               
169-409
               

               
Cow position:
               
chr24:39911103-39910855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
169-411
               

               
Cow position:
               
chr24:3464522-3464269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
170-396
               

               
Cow position:
               
chr24:28344318-28344543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
19, 133
               

               
Conread position:
               
170-408
               

               
Cow position:
               
chr24:175557-175333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
99, 16
               

               
Conread position:
               
170-411
               

               
Cow position:
               
chr24:10031520-10031752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
99, 16
               

               
Conread position:
               
170-411
               

               
Cow position:
               
chr24:33244333-33244564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
99, 15
               

               
Conread position:
               
170-436
               

               
Cow position:
               
chr24:7846763-7846495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
99, 54
               

               
Conread position:
               
171-411
               

               
Cow position:
               
chr24:15288763-15289006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
98, 15
               

               
Conread position:
               
172-394
               

               
Cow position:
               
chr24:41916192-41916418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
58, 10
               

               
Conread position:
               
174-425
               

               
Cow position:
               
chr24:13587054-13586798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
175-400
               

               
Cow position:
               
chr24:2379890-2380122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
175-406
               

               
Cow position:
               
chr24:42175469-42175698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
70, 94
               

               
Conread position:
               
175-431
               

               
Cow position:
               
chr24:18884335-18884594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
94, 183
               

               
Conread position:
               
175-434
               

               
Cow position:
               
chr24:18137369-18137101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 249
               

               
Conread position:
               
176-395
               

               
Cow position:
               
chr24:28342295-28342524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
176-400
               

               
Cow position:
               
chr24:43832471-43832689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 24
               

               
Conread position:
               
176-408
               

               
Cow position:
               
chr24:18442619-18442398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 14
               

               
Conread position:
               
178-442
               

               
Cow position:
               
chr24:18750646-18750922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 37
               

               
Conread position:
               
179-395
               

               
Cow position:
               
chr24:6742162-6742387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
180-337
               

               
Cow position:
               
chr24:42981813-42981659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
89, 10
               

               
Conread position:
               
183-341
               

               
Cow position:
               
chr24:17375585-17375744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
86, 144
               

               
Conread position:
               
183-409
               

               
Cow position:
               
chr24:23667171-23666949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
86, 54
               

               
Conread position:
               
183-415
               

               
Cow position:
               
chr24:22133118-22133348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
86, 138
               

               
Conread position:
               
183-415
               

               
Cow position:
               
chr24:42876944-42876718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
6, 76
               

               
Conread position:
               
183-432
               

               
Cow position:
               
chr24:37651671-37651919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
6, 118
               

               
Conread position:
               
183-435
               

               
Cow position:
               
chr24:6723714-6723956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
86, 112
               

               
Conread position:
               
185-399
               

               
Cow position:
               
chr24:11036886-11036671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
84, 142
               

               
Conread position:
               
185-409
               

               
Cow position:
               
chr24:19186891-19187108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
84, 53
               

               
Conread position:
               
187-412
               

               
Cow position:
               
chr24:29985033-29984811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
82, 131
               

               
Conread position:
               
188-409
               

               
Cow position:
               
chr24:19730731-19730958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
188-411
               

               
Cow position:
               
chr24:39238723-39238938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
81, 117
               

               
Conread position:
               
191-409
               

               
Cow position:
               
chr24:21835004-21834787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
81, 139
               

               
Conread position:
               
192-409
               

               
Cow position:
               
chr24:42687804-42688017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
77, 55
               

               
Conread position:
               
197-431
               

               
Cow position:
               
chr24:5447307-5447070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
72, 190
               

               
Conread position:
               
198-400
               

               
Cow position:
               
chr24:25122307-25122504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
71, 14
               

               
Conread position:
               
198-409
               

               
Cow position:
               
chr24:17309175-17308965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
71, 63
               

               
Conread position:
               
198-409
               

               
Cow position:
               
chr24:34079377-34079162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
106, 76
               

               
Conread position:
               
198-409
               

               
Cow position:
               
chr24:42226235-42226440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
198-437
               

               
Cow position:
               
chr24:10294428-10294184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
71, 177
               

               
Conread position:
               
199-409
               

               
Cow position:
               
chr24:34390246-34390447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 38
               

               
Conread position:
               
199-438
               

               
Cow position:
               
chr24:31049582-31049829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 54
               

               
Conread position:
               
200-397
               

               
Cow position:
               
chr24:32891080-32890884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
69, 127
               

               
Conread position:
               
200-409
               

               
Cow position:
               
chr24:28476522-28476309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
202-432
               

               
Cow position:
               
chr24:19598871-19599111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
202-436
               

               
Cow position:
               
chr24:22567069-22567307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
203-399
               

               
Cow position:
               
chr24:32230541-32230338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
24, 151
               

               
Conread position:
               
203-409
               

               
Cow position:
               
chr24:7757739-7757945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
66, 124
               

               
Conread position:
               
203-438
               

               
Cow position:
               
chr24:11028724-11028481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
205-403
               

               
Cow position:
               
chr24:24540519-24540322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
208-437
               

               
Cow position:
               
chr24:12120868-12121101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 119
               

               
Conread position:
               
209-407
               

               
Cow position:
               
chr24:6886984-6887180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
60, 35
               

               
Conread position:
               
209-409
               

               
Cow position:
               
chr24:16640882-16641089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
210-409
               

               
Cow position:
               
chr24:3412657-3412857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
60, 107
               

               
Conread position:
               
210-411
               

               
Cow position:
               
chr24:21715377-21715171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
59, 192
               

               
Conread position:
               
211-406
               

               
Cow position:
               
chr24:13610286-13610474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
58, 36
               

               
Conread position:
               
213-408
               

               
Cow position:
               
chr24:18302691-18302890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
56, 38
               

               
Conread position:
               
215-409
               

               
Cow position:
               
chr24:18730323-18730523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
215-409
               

               
Cow position:
               
chr24:36775798-36775595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
54, 38
               

               
Conread position:
               
217-395
               

               
Cow position:
               
chr24:161984-162168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
217-431
               

               
Cow position:
               
chr24:39904023-39903812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
87, 126
               

               
Conread position:
               
218-436
               

               
Cow position:
               
chr24:34595747-34595525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
51, 201
               

               
Conread position:
               
220-411
               

               
Cow position:
               
chr24:39304937-39304733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
222-408
               

               
Cow position:
               
chr24:27940635-27940453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
48, 39
               

               
Conread position:
               
223-399
               

               
Cow position:
               
chr24:3542286-3542468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
223-407
               

               
Cow position:
               
chr24:18874834-18874646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
46, 76
               

               
Conread position:
               
223-434
               

               
Cow position:
               
chr24:44776190-44775975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
47, 196
               

               
Conread position:
               
228-400
               

               
Cow position:
               
chr24:10219393-10219219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
228-432
               

               
Cow position:
               
chr24:39760017-39760224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
41, 10
               

               
Conread position:
               
230-406
               

               
Cow position:
               
chr24:28035594-28035769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
40, 95
               

               
Conread position:
               
231-396
               

               
Cow position:
               
chr24:13849159-13849327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
232-409
               

               
Cow position:
               
chr24:24165537-24165721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
232-415
               

               
Cow position:
               
chr24:15557346-15557162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
37, 126
               

               
Conread position:
               
233-434
               

               
Cow position:
               
chr24:22419957-22420161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
36, 94
               

               
Conread position:
               
234-437
               

               
Cow position:
               
chr24:40811677-40811873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
235-408
               

               
Cow position:
               
chr24:24091341-24091159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
238-411
               

               
Cow position:
               
chr24:250536-250356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
241-437
               

               
Cow position:
               
chr24:18405276-18405074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
242-396
               

               
Cow position:
               
chr24:43358704-43358858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
27, 100
               

               
Conread position:
               
242-408
               

               
Cow position:
               
chr24:30325778-30325607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
27, 88
               

               
Conread position:
               
242-409
               

               
Cow position:
               
chr24:28256053-28255887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 90
               

               
Conread position:
               
242-410
               

               
Cow position:
               
chr24:7275709-7275875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 45
               

               
Conread position:
               
242-411
               

               
Cow position:
               
chr24:25947856-25947681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
242-445
               

               
Cow position:
               
chr24:885436-885234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
46, 23
               

               
Conread position:
               
247-409
               

               
Cow position:
               
chr24:26588231-26588394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 80
               

               
Conread position:
               
247-442
               

               
Cow position:
               
chr24:21656417-21656625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
247-448
               

               
Cow position:
               
chr24:22129627-22129429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
22, 80
               

               
Conread position:
               
249-438
               

               
Cow position:
               
chr24:36286582-36286773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
20, 83
               

               
Conread position:
               
250-411
               

               
Cow position:
               
chr24:27413097-27412937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
19, 40
               

               
Conread position:
               
253-409
               

               
Cow position:
               
chr24:27719510-27719354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 74
               

               
Conread position:
               
255-434
               

               
Cow position:
               
chr24:6488227-6488407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
14, 72
               

               
Conread position:
               
268-408
               

               
Cow position:
               
chr24:41925855-41925991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
290-411
               

               
Cow position:
               
chr24:11208627-11208748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 36
               

               
Conread position:
               
297-418
               

               
Cow position:
               
chr24:33238191-33238069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
301-409
               

               
Cow position:
               
chr24:20537714-20537605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
303-427
               

               
Cow position:
               
chr24:42792423-42792546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               
Show alignments to all cow chromosomes.