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Cow genome map

           
Conread name:
           
Ova1-OVRM10133B11
        

               
Conread position:
               
1-164
               

               
Cow position:
               
chr27:23454985-23455146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 96
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr27:20592140-20591961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
164, 42
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr27:14902492-14902717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
162, 74
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr27:2682987-2683235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
164, 56
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr27:12429565-12429292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
29, 93
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr27:23472412-23472142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
160, 96
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr27:4812720-4813008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 95
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr27:30551152-30550862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
164, 42
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr27:24014584-24014884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
166, 44
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr27:20553873-20553584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
268, 34
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr27:4835451-4835763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
180, 94
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr27:12246815-12246496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
168, 62
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr27:4673177-4672843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 50
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr27:27038687-27039007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
151, 29
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr27:23483379-23483053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
167, 32
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr27:22454625-22454948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
67, 40
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr27:7212556-7212885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
44, 104
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr27:27640835-27641185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 102
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr27:26959464-26959804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 25
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr27:19896913-19896549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
165, 87
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr27:11815603-11815966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
150, 44
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr27:20067822-20068196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 15
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr27:26239181-26238800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 47
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr27:21408396-21408794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 93
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr27:18739544-18739145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
165, 44
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr27:6500221-6499826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 91
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr27:21393348-21393725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
93, 50
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr27:28931631-28932034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 89
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr27:31230937-31231311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
201, 44
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr27:15204075-15204470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
52, 71
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr27:24331882-24331480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
152, 59
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr27:26427972-26428362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 91
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr27:26433655-26434047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 119
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr27:29431617-29431242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 95
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr27:15408887-15409260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 48
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr27:16705403-16705018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 28
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr27:26864962-26865343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 32
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr27:26424429-26424813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
10, 47
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr27:299227-299612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 96
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr27:16284629-16284251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 94
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr27:19546346-19546759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr27:27632453-27632831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 58
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr27:21668968-21669353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 42
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr27:18558520-18558116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
165, 76
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr27:19388175-19387779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 97
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr27:26224112-26224498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
170, 93
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr27:10307139-10307546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 69
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr27:13841533-13841120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
165, 91
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr27:15454368-15453970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 68
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr27:17397290-17397694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 97
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr27:22547248-22547631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr27:27388872-27389270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
167, 34
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr27:27856490-27856096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
268, 55
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr27:30406875-30407290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 44
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr27:2957564-2957171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
17, 94
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr27:7412539-7412150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 108
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr27:8629715-8630117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 46
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr27:10582519-10582127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
169, 40
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr27:10980020-10979616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 88
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr27:13638836-13639231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 44
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr27:15668610-15669018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 96
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr27:16781021-16780616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 65
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr27:18030900-18031314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 91
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr27:23128611-23128221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
210, 17
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr27:25809366-25809760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
124, 28
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr27:27460415-27460822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 96
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr27:28206954-28206559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 95
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr27:30871903-30872301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
162, 42
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr27:7935007-7935400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr27:14670224-14670625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 95
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr27:6541781-6541388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
170, 33
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr27:12516355-12515948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr27:16786983-16786585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
142, 85
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr27:19668632-19669051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
109, 93
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr27:28496218-28496616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 102
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr27:28921740-28922141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
170, 62
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr27:30765188-30764786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
165, 42
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr27:31372823-31373217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
165, 34
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr27:27019944-27020354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
199, 46
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr27:8062200-8062615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
199, 79
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr27:13252166-13251765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
268, 81
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr27:27438348-27438772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 23
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr27:20828551-20828971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr27:22220710-22220273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 82
               

               
Conread position:
               
1-439
               

               
Cow position:
               
chr27:22426672-22427106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
167, 44
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr27:22035217-22035646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 96
               

               
Conread position:
               
2-320
               

               
Cow position:
               
chr27:1498469-1498160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
166, 16
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr27:25277292-25276971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
168, 33
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr27:30359554-30359236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
168, 30
               

               
Conread position:
               
2-340
               

               
Cow position:
               
chr27:30988953-30988624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
164, 57
               

               
Conread position:
               
2-392
               

               
Cow position:
               
chr27:23891093-23890706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 43
               

               
Conread position:
               
2-396
               

               
Cow position:
               
chr27:19661097-19660697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
58, 16
               

               
Conread position:
               
2-403
               

               
Cow position:
               
chr27:28018492-28018085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
225, 80
               

               
Conread position:
               
2-407
               

               
Cow position:
               
chr27:21977982-21978385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
164, 19
               

               
Conread position:
               
2-408
               

               
Cow position:
               
chr27:22171454-22171059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 28
               

               
Conread position:
               
2-411
               

               
Cow position:
               
chr27:28001662-28002049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
163, 39
               

               
Conread position:
               
2-452
               

               
Cow position:
               
chr27:11480474-11480925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 46
               

               
Conread position:
               
3-267
               

               
Cow position:
               
chr27:4829653-4829911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr27:25380145-25379861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
162, 40
               

               
Conread position:
               
3-340
               

               
Cow position:
               
chr27:20795938-20795617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
266, 21
               

               
Conread position:
               
3-394
               

               
Cow position:
               
chr27:19685560-19685939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 44
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr27:22735447-22735825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
266, 50
               

               
Conread position:
               
3-397
               

               
Cow position:
               
chr27:24227639-24228036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
163, 40
               

               
Conread position:
               
3-399
               

               
Cow position:
               
chr27:13875889-13875499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 89
               

               
Conread position:
               
3-399
               

               
Cow position:
               
chr27:30582892-30582506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
178, 41
               

               
Conread position:
               
3-403
               

               
Cow position:
               
chr27:29493762-29494136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 42
               

               
Conread position:
               
3-409
               

               
Cow position:
               
chr27:22513520-22513925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 60
               

               
Conread position:
               
3-410
               

               
Cow position:
               
chr27:6788113-6787707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
168, 22
               

               
Conread position:
               
3-410
               

               
Cow position:
               
chr27:30915156-30914762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
168, 38
               

               
Conread position:
               
3-411
               

               
Cow position:
               
chr27:18544152-18543742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
163, 56
               

               
Conread position:
               
3-437
               

               
Cow position:
               
chr27:27003127-27003528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
266, 29
               

               
Conread position:
               
4-408
               

               
Cow position:
               
chr27:30890444-30890058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 93
               

               
Conread position:
               
4-409
               

               
Cow position:
               
chr27:23452634-23452220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 155
               

               
Conread position:
               
5-364
               

               
Cow position:
               
chr27:22418612-22418963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
161, 73
               

               
Conread position:
               
5-376
               

               
Cow position:
               
chr27:1768481-1768833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
264, 30
               

               
Conread position:
               
5-396
               

               
Cow position:
               
chr27:23554167-23554560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 100
               

               
Conread position:
               
5-403
               

               
Cow position:
               
chr27:14343315-14343673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
257, 23
               

               
Conread position:
               
5-409
               

               
Cow position:
               
chr27:30868586-30868995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
161, 87
               

               
Conread position:
               
5-415
               

               
Cow position:
               
chr27:7958683-7959082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
273, 28
               

               
Conread position:
               
8-400
               

               
Cow position:
               
chr27:7731099-7731509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
168, 35
               

               
Conread position:
               
8-403
               

               
Cow position:
               
chr27:28190068-28190429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
163, 37
               

               
Conread position:
               
8-433
               

               
Cow position:
               
chr27:7649433-7649863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
18, 91
               

               
Conread position:
               
10-398
               

               
Cow position:
               
chr27:29831539-29831941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
143, 50
               

               
Conread position:
               
10-403
               

               
Cow position:
               
chr27:3306921-3306548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
158, 70
               

               
Conread position:
               
10-436
               

               
Cow position:
               
chr27:27554538-27554951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
180, 49
               

               
Conread position:
               
11-236
               

               
Cow position:
               
chr27:20548330-20548558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
97, 28
               

               
Conread position:
               
12-317
               

               
Cow position:
               
chr27:1123180-1122880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 84
               

               
Conread position:
               
13-395
               

               
Cow position:
               
chr27:29977393-29977018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
256, 32
               

               
Conread position:
               
18-263
               

               
Cow position:
               
chr27:20789240-20789474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
152, 29
               

               
Conread position:
               
18-396
               

               
Cow position:
               
chr27:435375-435001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
91, 40
               

               
Conread position:
               
18-408
               

               
Cow position:
               
chr27:17331642-17331249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 79
               

               
Conread position:
               
19-451
               

               
Cow position:
               
chr27:427111-426684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 90
               

               
Conread position:
               
20-340
               

               
Cow position:
               
chr27:16589575-16589876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 36
               

               
Conread position:
               
25-408
               

               
Cow position:
               
chr27:16103936-16103568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 18
               

               
Conread position:
               
25-411
               

               
Cow position:
               
chr27:16965724-16965328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
68, 129
               

               
Conread position:
               
28-411
               

               
Cow position:
               
chr27:2592681-2592290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
7, 36
               

               
Conread position:
               
28-435
               

               
Cow position:
               
chr27:19500099-19500506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
19, 66
               

               
Conread position:
               
30-436
               

               
Cow position:
               
chr27:20354712-20354329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
239, 29
               

               
Conread position:
               
31-336
               

               
Cow position:
               
chr27:31148892-31148592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
8, 35
               

               
Conread position:
               
33-336
               

               
Cow position:
               
chr27:22569898-22569613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
236, 15
               

               
Conread position:
               
33-338
               

               
Cow position:
               
chr27:27136391-27136692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
131, 63
               

               
Conread position:
               
33-349
               

               
Cow position:
               
chr27:20757919-20758214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 69
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr27:12596893-12596550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
177, 62
               

               
Conread position:
               
34-326
               

               
Cow position:
               
chr27:20641216-20641494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
154, 13
               

               
Conread position:
               
34-408
               

               
Cow position:
               
chr27:26999292-26999666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 58
               

               
Conread position:
               
37-437
               

               
Cow position:
               
chr27:1353714-1353309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
35, 58
               

               
Conread position:
               
39-409
               

               
Cow position:
               
chr27:21991275-21990899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
129, 12
               

               
Conread position:
               
39-437
               

               
Cow position:
               
chr27:15871285-15870885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
138, 53
               

               
Conread position:
               
43-397
               

               
Cow position:
               
chr27:27442052-27442392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
134, 49
               

               
Conread position:
               
43-425
               

               
Cow position:
               
chr27:11435206-11435587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
122, 16
               

               
Conread position:
               
44-342
               

               
Cow position:
               
chr27:26919785-26920088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
102, 51
               

               
Conread position:
               
45-409
               

               
Cow position:
               
chr27:20748894-20749246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
30, 15
               

               
Conread position:
               
47-410
               

               
Cow position:
               
chr27:11151790-11151426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
119, 45
               

               
Conread position:
               
48-397
               

               
Cow position:
               
chr27:20045999-20045664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
135, 46
               

               
Conread position:
               
49-407
               

               
Cow position:
               
chr27:26226178-26226530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
49-411
               

               
Cow position:
               
chr27:15867510-15867146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
109, 45
               

               
Conread position:
               
50-396
               

               
Cow position:
               
chr27:11160107-11159784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
219, 24
               

               
Conread position:
               
51-394
               

               
Cow position:
               
chr27:27694662-27695004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
135, 20
               

               
Conread position:
               
52-295
               

               
Cow position:
               
chr27:16626006-16625772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
116, 25
               

               
Conread position:
               
53-409
               

               
Cow position:
               
chr27:20078975-20078621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
113, 39
               

               
Conread position:
               
55-292
               

               
Cow position:
               
chr27:12191383-12191603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
214, 36
               

               
Conread position:
               
55-408
               

               
Cow position:
               
chr27:23594422-23594076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
51, 103
               

               
Conread position:
               
57-407
               

               
Cow position:
               
chr27:22386974-22386646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
144, 40
               

               
Conread position:
               
60-383
               

               
Cow position:
               
chr27:15925445-15925124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
209, 28
               

               
Conread position:
               
60-409
               

               
Cow position:
               
chr27:20481276-20481598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
61, 37
               

               
Conread position:
               
71-435
               

               
Cow position:
               
chr27:23917946-23918310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
26, 51
               

               
Conread position:
               
79-434
               

               
Cow position:
               
chr27:23930071-23929708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
5, 32
               

               
Conread position:
               
85-408
               

               
Cow position:
               
chr27:20092748-20093056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
11, 48
               

               
Conread position:
               
87-408
               

               
Cow position:
               
chr27:590684-591011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
94, 21
               

               
Conread position:
               
94-323
               

               
Cow position:
               
chr27:29504567-29504807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
10, 59
               

               
Conread position:
               
95-396
               

               
Cow position:
               
chr27:22489354-22489041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
71, 12
               

               
Conread position:
               
97-408
               

               
Cow position:
               
chr27:4944443-4944749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
83, 55
               

               
Conread position:
               
99-430
               

               
Cow position:
               
chr27:15315577-15315259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
170, 8
               

               
Conread position:
               
103-433
               

               
Cow position:
               
chr27:13869686-13869355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 5
               

               
Conread position:
               
104-437
               

               
Cow position:
               
chr27:20869626-20869956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
165, 19
               

               
Conread position:
               
107-399
               

               
Cow position:
               
chr27:20637001-20637292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
61, 45
               

               
Conread position:
               
107-410
               

               
Cow position:
               
chr27:26111844-26112163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
107-425
               

               
Cow position:
               
chr27:6925154-6924822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
59, 43
               

               
Conread position:
               
108-340
               

               
Cow position:
               
chr27:26407101-26407331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
77, 47
               

               
Conread position:
               
108-404
               

               
Cow position:
               
chr27:15378414-15378720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 43
               

               
Conread position:
               
108-409
               

               
Cow position:
               
chr27:26087358-26087076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
161, 44
               

               
Conread position:
               
108-409
               

               
Cow position:
               
chr27:29164829-29164531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
83, 50
               

               
Conread position:
               
110-293
               

               
Cow position:
               
chr27:21976111-21975927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
57, 43
               

               
Conread position:
               
110-425
               

               
Cow position:
               
chr27:20283704-20283384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
74, 42
               

               
Conread position:
               
110-431
               

               
Cow position:
               
chr27:18507704-18507378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
159, 42
               

               
Conread position:
               
111-433
               

               
Cow position:
               
chr27:20514882-20514558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
54, 39
               

               
Conread position:
               
112-267
               

               
Cow position:
               
chr27:24306888-24306730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
56, 40
               

               
Conread position:
               
115-409
               

               
Cow position:
               
chr27:31151434-31151140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
116-409
               

               
Cow position:
               
chr27:8962200-8962485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
50, 36
               

               
Conread position:
               
123-407
               

               
Cow position:
               
chr27:20629109-20628817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
146, 12
               

               
Conread position:
               
124-388
               

               
Cow position:
               
chr27:23860217-23859940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
13, 27
               

               
Conread position:
               
124-399
               

               
Cow position:
               
chr27:15865659-15865376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
42, 32
               

               
Conread position:
               
125-394
               

               
Cow position:
               
chr27:23107854-23108131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
127-391
               

               
Cow position:
               
chr27:29613442-29613717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 26
               

               
Conread position:
               
127-411
               

               
Cow position:
               
chr27:5553510-5553225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
141, 110
               

               
Conread position:
               
127-418
               

               
Cow position:
               
chr27:23485258-23484960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
129-403
               

               
Cow position:
               
chr27:29593585-29593866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
135-399
               

               
Cow position:
               
chr27:23507687-23507415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
135-407
               

               
Cow position:
               
chr27:20517696-20517411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 72
               

               
Conread position:
               
137-409
               

               
Cow position:
               
chr27:23559995-23560273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 15
               

               
Conread position:
               
145-399
               

               
Cow position:
               
chr27:16230908-16231174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 40
               

               
Conread position:
               
145-409
               

               
Cow position:
               
chr27:12564396-12564672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 5
               

               
Conread position:
               
145-411
               

               
Cow position:
               
chr27:26793759-26794030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
7, 38
               

               
Conread position:
               
145-431
               

               
Cow position:
               
chr27:6290499-6290210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
21, 5
               

               
Conread position:
               
145-436
               

               
Cow position:
               
chr27:18767035-18767338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
151-434
               

               
Cow position:
               
chr27:2885810-2886105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
15, 276
               

               
Conread position:
               
151-437
               

               
Cow position:
               
chr27:13254781-13255067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
157-409
               

               
Cow position:
               
chr27:26617416-26617171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
160-329
               

               
Cow position:
               
chr27:23943154-23942984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
163-384
               

               
Cow position:
               
chr27:1190471-1190695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
106, 28
               

               
Conread position:
               
163-403
               

               
Cow position:
               
chr27:20897019-20897258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
26, 84
               

               
Conread position:
               
163-406
               

               
Cow position:
               
chr27:12459289-12459047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
163-408
               

               
Cow position:
               
chr27:28478586-28478339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
20, 165
               

               
Conread position:
               
163-411
               

               
Cow position:
               
chr27:19509019-19508766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 159
               

               
Conread position:
               
165-340
               

               
Cow position:
               
chr27:6302468-6302641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
138, 24
               

               
Conread position:
               
168-409
               

               
Cow position:
               
chr27:12425288-12425044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
169-398
               

               
Cow position:
               
chr27:27058407-27058638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 26
               

               
Conread position:
               
169-408
               

               
Cow position:
               
chr27:31004941-31004699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
57, 142
               

               
Conread position:
               
169-409
               

               
Cow position:
               
chr27:29615053-29614798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
170-409
               

               
Cow position:
               
chr27:6241196-6241436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
102, 16
               

               
Conread position:
               
170-411
               

               
Cow position:
               
chr27:23994421-23994661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
170-432
               

               
Cow position:
               
chr27:30483298-30483569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
19, 258
               

               
Conread position:
               
170-437
               

               
Cow position:
               
chr27:237265-236999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
171-387
               

               
Cow position:
               
chr27:22552886-22553100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 92
               

               
Conread position:
               
171-399
               

               
Cow position:
               
chr27:26437122-26437354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
19, 125
               

               
Conread position:
               
171-409
               

               
Cow position:
               
chr27:20719286-20719041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
172-396
               

               
Cow position:
               
chr27:11993871-11994098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
49, 14
               

               
Conread position:
               
172-397
               

               
Cow position:
               
chr27:17933925-17933691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
172-409
               

               
Cow position:
               
chr27:24440228-24440466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
97, 24
               

               
Conread position:
               
172-411
               

               
Cow position:
               
chr27:27055284-27055050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
13, 6
               

               
Conread position:
               
173-408
               

               
Cow position:
               
chr27:26853363-26853594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 74
               

               
Conread position:
               
173-410
               

               
Cow position:
               
chr27:31210545-31210305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 74
               

               
Conread position:
               
173-436
               

               
Cow position:
               
chr27:20486050-20485772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
52, 8
               

               
Conread position:
               
174-411
               

               
Cow position:
               
chr27:11982651-11982894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
17, 5
               

               
Conread position:
               
175-403
               

               
Cow position:
               
chr27:25152079-25151851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 63
               

               
Conread position:
               
175-427
               

               
Cow position:
               
chr27:788805-789074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
94, 11
               

               
Conread position:
               
176-439
               

               
Cow position:
               
chr27:31169119-31169377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
99, 10
               

               
Conread position:
               
178-437
               

               
Cow position:
               
chr27:19607670-19607932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
91, 13
               

               
Conread position:
               
179-411
               

               
Cow position:
               
chr27:27740304-27740538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
179-415
               

               
Cow position:
               
chr27:8790752-8790993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
62, 151
               

               
Conread position:
               
180-437
               

               
Cow position:
               
chr27:7304617-7304876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
89, 11
               

               
Conread position:
               
182-340
               

               
Cow position:
               
chr27:24305420-24305264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
122, 65
               

               
Conread position:
               
182-340
               

               
Cow position:
               
chr27:30489424-30489584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
87, 139
               

               
Conread position:
               
182-408
               

               
Cow position:
               
chr27:6319905-6319679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
87, 136
               

               
Conread position:
               
182-409
               

               
Cow position:
               
chr27:5545564-5545336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 74
               

               
Conread position:
               
182-409
               

               
Cow position:
               
chr27:31386644-31386874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
42, 153
               

               
Conread position:
               
183-430
               

               
Cow position:
               
chr27:10323822-10323578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
86, 54
               

               
Conread position:
               
184-399
               

               
Cow position:
               
chr27:26121745-26121524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
184-408
               

               
Cow position:
               
chr27:7343444-7343671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
85, 199
               

               
Conread position:
               
184-408
               

               
Cow position:
               
chr27:15002994-15003222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
184-410
               

               
Cow position:
               
chr27:24693397-24693174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
118, 77
               

               
Conread position:
               
186-409
               

               
Cow position:
               
chr27:19933053-19932822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
187-409
               

               
Cow position:
               
chr27:18435152-18435374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
82, 140
               

               
Conread position:
               
188-378
               

               
Cow position:
               
chr27:12710229-12710027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
188-435
               

               
Cow position:
               
chr27:6282811-6282564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
81, 41
               

               
Conread position:
               
188-440
               

               
Cow position:
               
chr27:30414923-30415179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 174
               

               
Conread position:
               
192-403
               

               
Cow position:
               
chr27:7425212-7425426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
192-409
               

               
Cow position:
               
chr27:23957492-23957274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
54, 38
               

               
Conread position:
               
192-410
               

               
Cow position:
               
chr27:6106676-6106460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
77, 55
               

               
Conread position:
               
192-410
               

               
Cow position:
               
chr27:24951986-24952197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
37, 59
               

               
Conread position:
               
193-437
               

               
Cow position:
               
chr27:20327476-20327227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
23, 227
               

               
Conread position:
               
198-416
               

               
Cow position:
               
chr27:30455964-30455742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
198-431
               

               
Cow position:
               
chr27:20653285-20653525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
198-431
               

               
Cow position:
               
chr27:24007438-24007199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
198-432
               

               
Cow position:
               
chr27:10404146-10404385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
71, 42
               

               
Conread position:
               
200-411
               

               
Cow position:
               
chr27:15926764-15926551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 109
               

               
Conread position:
               
200-433
               

               
Cow position:
               
chr27:26481227-26481465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
104, 69
               

               
Conread position:
               
201-400
               

               
Cow position:
               
chr27:26323415-26323207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
68, 19
               

               
Conread position:
               
201-408
               

               
Cow position:
               
chr27:19452969-19452756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
203-409
               

               
Cow position:
               
chr27:20548776-20548565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
205-394
               

               
Cow position:
               
chr27:26400757-26400946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
6, 123
               

               
Conread position:
               
205-408
               

               
Cow position:
               
chr27:24223915-24223712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
42, 54
               

               
Conread position:
               
206-399
               

               
Cow position:
               
chr27:17102858-17102666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
63, 123
               

               
Conread position:
               
207-407
               

               
Cow position:
               
chr27:9253157-9253354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
62, 10
               

               
Conread position:
               
207-407
               

               
Cow position:
               
chr27:20770567-20770758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 96
               

               
Conread position:
               
210-407
               

               
Cow position:
               
chr27:19576365-19576565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
59, 117
               

               
Conread position:
               
212-408
               

               
Cow position:
               
chr27:13204415-13204222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
57, 39
               

               
Conread position:
               
214-396
               

               
Cow position:
               
chr27:15859343-15859528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
55, 33
               

               
Conread position:
               
214-410
               

               
Cow position:
               
chr27:21025640-21025452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
59, 126
               

               
Conread position:
               
214-430
               

               
Cow position:
               
chr27:11134040-11133824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
56, 41
               

               
Conread position:
               
215-408
               

               
Cow position:
               
chr27:10581482-10581291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
89, 23
               

               
Conread position:
               
215-409
               

               
Cow position:
               
chr27:11208602-11208801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
54, 16
               

               
Conread position:
               
217-394
               

               
Cow position:
               
chr27:26504253-26504075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
52, 29
               

               
Conread position:
               
217-399
               

               
Cow position:
               
chr27:232505-232317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
217-401
               

               
Cow position:
               
chr27:1184226-1184409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
53, 115
               

               
Conread position:
               
217-409
               

               
Cow position:
               
chr27:12284945-12284750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 30
               

               
Conread position:
               
218-411
               

               
Cow position:
               
chr27:2949377-2949562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
83, 50
               

               
Conread position:
               
220-409
               

               
Cow position:
               
chr27:11507315-11507508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 80
               

               
Conread position:
               
220-424
               

               
Cow position:
               
chr27:11323278-11323067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
220-437
               

               
Cow position:
               
chr27:19483153-19483372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 160
               

               
Conread position:
               
221-409
               

               
Cow position:
               
chr27:4398544-4398729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 122
               

               
Conread position:
               
221-409
               

               
Cow position:
               
chr27:16047551-16047731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
46, 74
               

               
Conread position:
               
222-437
               

               
Cow position:
               
chr27:24358279-24358064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 60
               

               
Conread position:
               
223-399
               

               
Cow position:
               
chr27:20591874-20591693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
223-407
               

               
Cow position:
               
chr27:20325296-20325115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
47, 110
               

               
Conread position:
               
224-419
               

               
Cow position:
               
chr27:20048578-20048382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 107
               

               
Conread position:
               
224-431
               

               
Cow position:
               
chr27:18791565-18791779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 190
               

               
Conread position:
               
225-403
               

               
Cow position:
               
chr27:1067511-1067338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
44, 100
               

               
Conread position:
               
228-408
               

               
Cow position:
               
chr27:28476172-28476351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
14, 99
               

               
Conread position:
               
228-443
               

               
Cow position:
               
chr27:18988163-18987942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
234-409
               

               
Cow position:
               
chr27:26940013-26939834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
32, 114
               

               
Conread position:
               
235-431
               

               
Cow position:
               
chr27:3498484-3498287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
35, 93
               

               
Conread position:
               
238-397
               

               
Cow position:
               
chr27:23477876-23477716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
31, 81
               

               
Conread position:
               
241-437
               

               
Cow position:
               
chr27:22748255-22748057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
28, 175
               

               
Conread position:
               
242-396
               

               
Cow position:
               
chr27:23177386-23177543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
242-399
               

               
Cow position:
               
chr27:26909665-26909822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
28, 102
               

               
Conread position:
               
242-410
               

               
Cow position:
               
chr27:31183502-31183327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 160
               

               
Conread position:
               
242-411
               

               
Cow position:
               
chr27:27449959-27450129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
30, 85
               

               
Conread position:
               
242-425
               

               
Cow position:
               
chr27:21951052-21951241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
242-448
               

               
Cow position:
               
chr27:21202119-21201904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
243-409
               

               
Cow position:
               
chr27:11528856-11528685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
244-408
               

               
Cow position:
               
chr27:178787-178620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
247-434
               

               
Cow position:
               
chr27:1292668-1292477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
19, 176
               

               
Conread position:
               
248-436
               

               
Cow position:
               
chr27:22583667-22583469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
251-408
               

               
Cow position:
               
chr27:21661053-21660893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
251-409
               

               
Cow position:
               
chr27:19074105-19074267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
18, 53
               

               
Conread position:
               
258-409
               

               
Cow position:
               
chr27:28062288-28062438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 84
               

               
Conread position:
               
260-408
               

               
Cow position:
               
chr27:20561490-20561345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
9, 66
               

               
Conread position:
               
268-406
               

               
Cow position:
               
chr27:22150795-22150934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
268-408
               

               
Cow position:
               
chr27:2934403-2934265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
34, 92
               

               
Conread position:
               
272-411
               

               
Cow position:
               
chr27:23527606-23527745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
30, 55
               

               
Conread position:
               
303-409
               

               
Cow position:
               
chr27:26315279-26315384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
303-436
               

               
Cow position:
               
chr27:30004779-30004913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
307-403
               

               
Cow position:
               
chr27:23996263-23996359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
317-427
               

               
Cow position:
               
chr27:1122269-1122158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
321-448
               

               
Cow position:
               
chr27:28065612-28065736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
90, 0
               
Show alignments to all cow chromosomes.