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Cow genome map

           
Conread name:
           
Ova1-OVRM10133B11
        

               
Conread position:
               
1-102
               

               
Cow position:
               
chr4:33062703-33062804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-140
               

               
Cow position:
               
chr4:10472016-10472140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr4:54667898-54667749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr4:41907999-41907801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
177, 44
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr4:48137702-48137918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
165, 59
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr4:19438251-19438474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
107, 46
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr4:27687716-27687940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
167, 34
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr4:53209028-53209253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
166, 52
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr4:61972682-61972442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
165, 107
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr4:11201610-11201852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
164, 52
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:37620095-37619853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
157, 44
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr4:33421569-33421326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr4:17474231-17474483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
165, 38
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr4:20299063-20299319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 81
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr4:25984021-25984276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
263, 46
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr4:41602641-41602910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
60, 42
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr4:65431938-65432211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
94, 13
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr4:25359401-25359662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
266, 32
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr4:17112084-17111803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
167, 34
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr4:21257336-21257052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
188, 107
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr4:16799400-16799112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
164, 34
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr4:35940219-35939931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
165, 93
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr4:20139727-20139435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 47
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr4:16736296-16736619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
212, 58
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr4:5461067-5460757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
176, 34
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr4:3850345-3850657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
102, 112
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr4:24002176-24001859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
164, 7
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr4:63459423-63459115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
146, 96
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr4:27755508-27755194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
167, 42
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr4:37935488-37935172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
169, 44
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr4:19582822-19582503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
160, 23
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr4:25879188-25879507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
85, 44
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr4:47348624-47348945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
165, 40
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr4:41301198-41300880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
165, 42
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr4:62772141-62771804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
161, 69
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr4:12903610-12903945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
166, 64
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr4:19322286-19321953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
152, 40
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr4:33612570-33612241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 119
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr4:45367526-45367864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
165, 44
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr4:46591452-46591789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
34, 92
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr4:48172903-48173259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
44, 88
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr4:58881174-58880839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 95
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr4:11193975-11194309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
167, 40
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr4:11872119-11871792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 95
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr4:63965197-63964839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 42
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr4:6653525-6653880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
268, 40
               

               
Conread position:
               
1-377
               

               
Cow position:
               
chr4:7571202-7571570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 35
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr4:19548789-19549171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
268, 44
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr4:31859054-31859443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
135, 91
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr4:36396333-36395951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
223, 91
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr4:23445260-23444860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 42
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr4:45775549-45775151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 44
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr4:46550177-46550568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 95
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr4:43148196-43148595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
165, 91
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr4:60897480-60897113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
215, 42
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr4:11897506-11897121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
165, 72
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr4:12034056-12034451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
84, 37
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr4:11187252-11187634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
165, 34
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr4:46526793-46527186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
183, 34
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr4:63349681-63349293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
268, 48
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr4:4321213-4320810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 91
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr4:48152575-48152189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 90
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr4:66173005-66172612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
164, 21
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr4:31004612-31004228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
165, 42
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr4:1026436-1026052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 96
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr4:3283656-3283268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 63
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr4:19597522-19597146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 9
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr4:25369909-25370280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
39, 29
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr4:40414838-40414441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 19
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr4:59785110-59785506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
164, 34
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr4:66118734-66118344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
222, 43
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr4:37915538-37915149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 29
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr4:4319356-4318964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 79
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr4:23847258-23846864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 59
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr4:35981782-35982188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 96
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr4:36841072-36841451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 96
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr4:46258278-46258685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
88, 47
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr4:47730655-47731054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
167, 34
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr4:62471861-62472266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 119
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr4:85488-85885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 57
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr4:10732011-10732413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 91
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr4:19097084-19097480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 34
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr4:23599963-23600361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 98
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr4:27529906-27530303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 97
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr4:37691515-37691120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
189, 25
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr4:41867237-41867639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 44
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr4:61897746-61897361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 35
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr4:68387584-68387979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
166, 44
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr4:275253-275636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
167, 10
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr4:1014860-1015263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
167, 47
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr4:3340744-3341148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 42
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr4:3687721-3688121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr4:12591418-12591028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
169, 46
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr4:13284169-13284575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
138, 76
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr4:13693885-13693482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 119
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr4:18974225-18974618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 48
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr4:19265365-19265769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
165, 91
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr4:19584497-19584906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 106
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr4:20327922-20327531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 10
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr4:21064831-21065217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 42
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr4:29291315-29291698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
165, 23
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr4:30974129-30974526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 91
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr4:31023234-31023641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
165, 81
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr4:44612795-44613197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
170, 44
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr4:46060739-46061140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
165, 21
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr4:49794472-49794842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
268, 29
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr4:51898796-51899213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 94
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr4:52748665-52748270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 34
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr4:56590823-56591234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 97
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr4:68764308-68764711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
165, 42
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr4:12030631-12031042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
37, 95
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr4:22138443-22138023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 96
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr4:48485793-48486189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 95
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr4:10968592-10968203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
166, 42
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr4:12127850-12127445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 58
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr4:15871930-15871547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
268, 40
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr4:18095886-18095467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 92
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr4:24810650-24810258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 54
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr4:25197705-25197297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 64
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr4:51850989-51851406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 86
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr4:15904891-15905303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 42
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr4:4185914-4186315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 15
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr4:23647050-23646660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
192, 37
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr4:7705-7286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
222, 35
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr4:2893817-2894251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
165, 42
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr4:19316207-19315791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
170, 42
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr4:48321821-48322251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
88, 40
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr4:17833113-17832679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
135, 49
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr4:58248200-58248618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
167, 34
               

               
Conread position:
               
1-436
               

               
Cow position:
               
chr4:10916049-10915610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 97
               

               
Conread position:
               
1-436
               

               
Cow position:
               
chr4:21058593-21058163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
125, 91
               

               
Conread position:
               
1-436
               

               
Cow position:
               
chr4:55270968-55270548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
215, 91
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr4:15635651-15635231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
170, 25
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr4:65824198-65824621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
87, 95
               

               
Conread position:
               
1-441
               

               
Cow position:
               
chr4:34166182-34165763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
165, 34
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr4:13255886-13256305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
164, 15
               

               
Conread position:
               
1-472
               

               
Cow position:
               
chr4:4085343-4084856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 11
               

               
Conread position:
               
2-210
               

               
Cow position:
               
chr4:53999713-53999518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
162, 41
               

               
Conread position:
               
2-257
               

               
Cow position:
               
chr4:19463285-19463534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
166, 93
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr4:37704059-37704384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
64, 14
               

               
Conread position:
               
2-375
               

               
Cow position:
               
chr4:50203541-50203915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
154, 90
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr4:46383580-46383183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
64, 75
               

               
Conread position:
               
2-400
               

               
Cow position:
               
chr4:37342911-37343303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
65, 43
               

               
Conread position:
               
2-400
               

               
Cow position:
               
chr4:43740315-43740714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
104, 43
               

               
Conread position:
               
2-403
               

               
Cow position:
               
chr4:38935152-38935544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 46
               

               
Conread position:
               
2-403
               

               
Cow position:
               
chr4:59277686-59277288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 94
               

               
Conread position:
               
2-406
               

               
Cow position:
               
chr4:14152868-14153305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
75, 45
               

               
Conread position:
               
2-406
               

               
Cow position:
               
chr4:19708735-19709132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
129, 46
               

               
Conread position:
               
2-408
               

               
Cow position:
               
chr4:34630695-34631098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
189, 33
               

               
Conread position:
               
2-408
               

               
Cow position:
               
chr4:36290401-36290813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 156
               

               
Conread position:
               
2-408
               

               
Cow position:
               
chr4:59871287-59871671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
157, 28
               

               
Conread position:
               
2-409
               

               
Cow position:
               
chr4:27664799-27665209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
164, 90
               

               
Conread position:
               
2-409
               

               
Cow position:
               
chr4:28836320-28836728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 92
               

               
Conread position:
               
2-409
               

               
Cow position:
               
chr4:30779041-30778628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
33, 103
               

               
Conread position:
               
2-409
               

               
Cow position:
               
chr4:34641935-34641531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 38
               

               
Conread position:
               
2-409
               

               
Cow position:
               
chr4:61391414-61391043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
267, 96
               

               
Conread position:
               
2-411
               

               
Cow position:
               
chr4:25226727-25227129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
69, 36
               

               
Conread position:
               
2-411
               

               
Cow position:
               
chr4:65919411-65919811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 39
               

               
Conread position:
               
2-426
               

               
Cow position:
               
chr4:34209820-34210248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
163, 39
               

               
Conread position:
               
3-232
               

               
Cow position:
               
chr4:33357726-33357949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
165, 8
               

               
Conread position:
               
3-284
               

               
Cow position:
               
chr4:19313799-19314078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
163, 83
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr4:36893148-36893479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
163, 94
               

               
Conread position:
               
3-340
               

               
Cow position:
               
chr4:32726017-32726350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
163, 89
               

               
Conread position:
               
3-389
               

               
Cow position:
               
chr4:42424007-42423633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 94
               

               
Conread position:
               
3-403
               

               
Cow position:
               
chr4:29384424-29384055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
266, 40
               

               
Conread position:
               
3-408
               

               
Cow position:
               
chr4:25356511-25356139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 70
               

               
Conread position:
               
3-408
               

               
Cow position:
               
chr4:28772272-28771879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 38
               

               
Conread position:
               
3-410
               

               
Cow position:
               
chr4:16762937-16762526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
69, 89
               

               
Conread position:
               
3-465
               

               
Cow position:
               
chr4:56240050-56239615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 40
               

               
Conread position:
               
4-407
               

               
Cow position:
               
chr4:62317235-62317637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
38, 89
               

               
Conread position:
               
5-337
               

               
Cow position:
               
chr4:63096279-63095954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 27
               

               
Conread position:
               
5-396
               

               
Cow position:
               
chr4:26323529-26323923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 44
               

               
Conread position:
               
5-399
               

               
Cow position:
               
chr4:21531845-21531458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 42
               

               
Conread position:
               
5-403
               

               
Cow position:
               
chr4:28839422-28839796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 24
               

               
Conread position:
               
5-407
               

               
Cow position:
               
chr4:9444894-9444492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
64, 90
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr4:19699897-19700311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 93
               

               
Conread position:
               
6-310
               

               
Cow position:
               
chr4:38952356-38952647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
20, 52
               

               
Conread position:
               
6-341
               

               
Cow position:
               
chr4:9815554-9815221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
263, 102
               

               
Conread position:
               
6-402
               

               
Cow position:
               
chr4:27344873-27344497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
183, 20
               

               
Conread position:
               
6-409
               

               
Cow position:
               
chr4:31136554-31136947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 39
               

               
Conread position:
               
6-409
               

               
Cow position:
               
chr4:62983756-62983366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 100
               

               
Conread position:
               
8-95
               

               
Cow position:
               
chr4:19577862-19577949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
88
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
8-349
               

               
Cow position:
               
chr4:19007842-19008176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
158, 84
               

               
Conread position:
               
8-354
               

               
Cow position:
               
chr4:53100605-53100945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 111
               

               
Conread position:
               
8-398
               

               
Cow position:
               
chr4:29106699-29107092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 84
               

               
Conread position:
               
8-400
               

               
Cow position:
               
chr4:13344341-13344719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 90
               

               
Conread position:
               
8-409
               

               
Cow position:
               
chr4:26659104-26659492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 26
               

               
Conread position:
               
8-411
               

               
Cow position:
               
chr4:61389274-61388874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
163, 40
               

               
Conread position:
               
9-296
               

               
Cow position:
               
chr4:11331890-11332175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
9-390
               

               
Cow position:
               
chr4:29238242-29237867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 83
               

               
Conread position:
               
9-396
               

               
Cow position:
               
chr4:22101466-22101082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
53, 86
               

               
Conread position:
               
9-399
               

               
Cow position:
               
chr4:570600-570970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
162, 19
               

               
Conread position:
               
9-403
               

               
Cow position:
               
chr4:13589891-13590273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
260, 34
               

               
Conread position:
               
9-411
               

               
Cow position:
               
chr4:66256488-66256873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
76, 26
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr4:68805828-68806215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
258, 53
               

               
Conread position:
               
10-317
               

               
Cow position:
               
chr4:54111545-54111842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
108, 84
               

               
Conread position:
               
10-353
               

               
Cow position:
               
chr4:21392011-21391677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 25
               

               
Conread position:
               
10-403
               

               
Cow position:
               
chr4:19408198-19407805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
158, 27
               

               
Conread position:
               
10-409
               

               
Cow position:
               
chr4:43515524-43515915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
155, 82
               

               
Conread position:
               
11-260
               

               
Cow position:
               
chr4:3689511-3689745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
182, 18
               

               
Conread position:
               
11-332
               

               
Cow position:
               
chr4:65175341-65175030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
8, 72
               

               
Conread position:
               
11-408
               

               
Cow position:
               
chr4:17774547-17774174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
98, 7
               

               
Conread position:
               
12-284
               

               
Cow position:
               
chr4:24744611-24744340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
31, 87
               

               
Conread position:
               
12-295
               

               
Cow position:
               
chr4:620350-620058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 109
               

               
Conread position:
               
12-338
               

               
Cow position:
               
chr4:10378914-10379234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
158, 35
               

               
Conread position:
               
12-408
               

               
Cow position:
               
chr4:19744685-19745061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
164, 94
               

               
Conread position:
               
12-411
               

               
Cow position:
               
chr4:68076727-68076345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
156, 45
               

               
Conread position:
               
13-409
               

               
Cow position:
               
chr4:4084641-4084265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 30
               

               
Conread position:
               
18-408
               

               
Cow position:
               
chr4:51727882-51728265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 79
               

               
Conread position:
               
21-262
               

               
Cow position:
               
chr4:23070128-23069890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
22-411
               

               
Cow position:
               
chr4:22713681-22713303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 70
               

               
Conread position:
               
23-411
               

               
Cow position:
               
chr4:22073505-22073123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
249, 74
               

               
Conread position:
               
24-325
               

               
Cow position:
               
chr4:61148405-61148724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
141, 68
               

               
Conread position:
               
26-400
               

               
Cow position:
               
chr4:53208109-53208466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 59
               

               
Conread position:
               
26-411
               

               
Cow position:
               
chr4:7964842-7964453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
68, 86
               

               
Conread position:
               
28-299
               

               
Cow position:
               
chr4:21233058-21232793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
125, 70
               

               
Conread position:
               
29-284
               

               
Cow position:
               
chr4:54930604-54930356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
137, 15
               

               
Conread position:
               
29-409
               

               
Cow position:
               
chr4:45077252-45076887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
240, 27
               

               
Conread position:
               
29-409
               

               
Cow position:
               
chr4:66547950-66547571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
137, 63
               

               
Conread position:
               
30-340
               

               
Cow position:
               
chr4:44782191-44782497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
136, 62
               

               
Conread position:
               
30-406
               

               
Cow position:
               
chr4:17186535-17186159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 93
               

               
Conread position:
               
30-411
               

               
Cow position:
               
chr4:31506214-31505824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
138, 62
               

               
Conread position:
               
31-337
               

               
Cow position:
               
chr4:33433445-33433138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
135, 64
               

               
Conread position:
               
31-373
               

               
Cow position:
               
chr4:62921043-62920720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
31-397
               

               
Cow position:
               
chr4:46393257-46393621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
135, 35
               

               
Conread position:
               
32-398
               

               
Cow position:
               
chr4:64119-63755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
156, 29
               

               
Conread position:
               
33-322
               

               
Cow position:
               
chr4:55395584-55395867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
133, 26
               

               
Conread position:
               
33-403
               

               
Cow position:
               
chr4:3421448-3421810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 63
               

               
Conread position:
               
33-408
               

               
Cow position:
               
chr4:53134427-53134788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
36, 72
               

               
Conread position:
               
33-409
               

               
Cow position:
               
chr4:12676628-12676987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
135, 26
               

               
Conread position:
               
33-409
               

               
Cow position:
               
chr4:34022766-34022394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 64
               

               
Conread position:
               
34-403
               

               
Cow position:
               
chr4:509081-508726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
235, 58
               

               
Conread position:
               
34-408
               

               
Cow position:
               
chr4:12049067-12049415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
134, 61
               

               
Conread position:
               
36-409
               

               
Cow position:
               
chr4:47262353-47262729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
12, 59
               

               
Conread position:
               
38-396
               

               
Cow position:
               
chr4:54479078-54478735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
231, 59
               

               
Conread position:
               
39-385
               

               
Cow position:
               
chr4:17052775-17052417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
127, 48
               

               
Conread position:
               
39-433
               

               
Cow position:
               
chr4:45685296-45685667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
132, 9
               

               
Conread position:
               
42-409
               

               
Cow position:
               
chr4:34383517-34383146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
124, 50
               

               
Conread position:
               
42-434
               

               
Cow position:
               
chr4:34369623-34369246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
121, 52
               

               
Conread position:
               
43-332
               

               
Cow position:
               
chr4:69543009-69543299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
122, 51
               

               
Conread position:
               
43-399
               

               
Cow position:
               
chr4:33100986-33100625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
153, 51
               

               
Conread position:
               
43-400
               

               
Cow position:
               
chr4:64192359-64191997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
89, 9
               

               
Conread position:
               
43-406
               

               
Cow position:
               
chr4:43909574-43909954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
51, 28
               

               
Conread position:
               
43-408
               

               
Cow position:
               
chr4:20147016-20147376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
43-409
               

               
Cow position:
               
chr4:27632284-27632633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
123, 17
               

               
Conread position:
               
43-431
               

               
Cow position:
               
chr4:2885713-2885331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
123, 32
               

               
Conread position:
               
44-409
               

               
Cow position:
               
chr4:16881531-16881181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
145, 43
               

               
Conread position:
               
44-428
               

               
Cow position:
               
chr4:21089038-21088657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
149, 48
               

               
Conread position:
               
45-340
               

               
Cow position:
               
chr4:8947226-8947521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
111, 52
               

               
Conread position:
               
45-363
               

               
Cow position:
               
chr4:46456227-46455919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
126, 15
               

               
Conread position:
               
45-409
               

               
Cow position:
               
chr4:13668795-13668426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
115, 44
               

               
Conread position:
               
47-415
               

               
Cow position:
               
chr4:57721893-57722260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
107, 47
               

               
Conread position:
               
48-399
               

               
Cow position:
               
chr4:19501248-19500906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
142, 49
               

               
Conread position:
               
48-411
               

               
Cow position:
               
chr4:1985479-1985845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
61, 100
               

               
Conread position:
               
49-400
               

               
Cow position:
               
chr4:29805533-29805186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
117, 45
               

               
Conread position:
               
49-431
               

               
Cow position:
               
chr4:15439416-15439798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
152, 17
               

               
Conread position:
               
50-435
               

               
Cow position:
               
chr4:2099471-2099849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
220, 51
               

               
Conread position:
               
53-385
               

               
Cow position:
               
chr4:25920820-25921154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
79, 39
               

               
Conread position:
               
54-431
               

               
Cow position:
               
chr4:48104731-48104351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
113, 49
               

               
Conread position:
               
60-406
               

               
Cow position:
               
chr4:61313360-61313010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
111, 41
               

               
Conread position:
               
62-411
               

               
Cow position:
               
chr4:14542829-14542480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
108, 28
               

               
Conread position:
               
62-427
               

               
Cow position:
               
chr4:58423965-58423582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
104, 30
               

               
Conread position:
               
63-411
               

               
Cow position:
               
chr4:48409415-48409091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
136, 44
               

               
Conread position:
               
66-394
               

               
Cow position:
               
chr4:54171476-54171802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
73, 28
               

               
Conread position:
               
66-399
               

               
Cow position:
               
chr4:54927586-54927248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
66-410
               

               
Cow position:
               
chr4:20125136-20124775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
66-418
               

               
Cow position:
               
chr4:20027247-20026904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
67-396
               

               
Cow position:
               
chr4:4826980-4827312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 27
               

               
Conread position:
               
67-403
               

               
Cow position:
               
chr4:34700191-34699858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
97, 32
               

               
Conread position:
               
72-370
               

               
Cow position:
               
chr4:40918137-40918455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
72-430
               

               
Cow position:
               
chr4:59873280-59873640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
96, 80
               

               
Conread position:
               
73-408
               

               
Cow position:
               
chr4:16814241-16814582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
49, 22
               

               
Conread position:
               
76-399
               

               
Cow position:
               
chr4:14500398-14500065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
61, 31
               

               
Conread position:
               
76-409
               

               
Cow position:
               
chr4:12473708-12474042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 22
               

               
Conread position:
               
82-436
               

               
Cow position:
               
chr4:46529106-46528763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
187, 25
               

               
Conread position:
               
83-339
               

               
Cow position:
               
chr4:48396936-48396676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
85-380
               

               
Cow position:
               
chr4:37313029-37313334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 31
               

               
Conread position:
               
87-412
               

               
Cow position:
               
chr4:45837762-45837434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 20
               

               
Conread position:
               
89-389
               

               
Cow position:
               
chr4:57584375-57584067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
77, 9
               

               
Conread position:
               
90-403
               

               
Cow position:
               
chr4:21874038-21874364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 57
               

               
Conread position:
               
94-349
               

               
Cow position:
               
chr4:17084472-17084209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
8, 60
               

               
Conread position:
               
96-370
               

               
Cow position:
               
chr4:53125992-53126259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 11
               

               
Conread position:
               
96-411
               

               
Cow position:
               
chr4:19578275-19578577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 44
               

               
Conread position:
               
97-437
               

               
Cow position:
               
chr4:68889683-68889353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
81, 66
               

               
Conread position:
               
99-403
               

               
Cow position:
               
chr4:36577755-36577425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 53
               

               
Conread position:
               
102-320
               

               
Cow position:
               
chr4:9151-8930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
34, 22
               

               
Conread position:
               
104-429
               

               
Cow position:
               
chr4:22546957-22546629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
62, 48
               

               
Conread position:
               
106-411
               

               
Cow position:
               
chr4:7043940-7043623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
59, 46
               

               
Conread position:
               
106-411
               

               
Cow position:
               
chr4:16513637-16513334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
122, 43
               

               
Conread position:
               
107-388
               

               
Cow position:
               
chr4:54872142-54871852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
46, 39
               

               
Conread position:
               
107-396
               

               
Cow position:
               
chr4:6659928-6659633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
107, 46
               

               
Conread position:
               
107-403
               

               
Cow position:
               
chr4:46494180-46494487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
59, 49
               

               
Conread position:
               
107-409
               

               
Cow position:
               
chr4:37732599-37732287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
61, 49
               

               
Conread position:
               
107-409
               

               
Cow position:
               
chr4:41371057-41370749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
59, 45
               

               
Conread position:
               
107-410
               

               
Cow position:
               
chr4:52779736-52780038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
59, 45
               

               
Conread position:
               
107-436
               

               
Cow position:
               
chr4:38946092-38946438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
45, 152
               

               
Conread position:
               
108-284
               

               
Cow position:
               
chr4:67466607-67466788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 76
               

               
Conread position:
               
108-385
               

               
Cow position:
               
chr4:25537430-25537718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 44
               

               
Conread position:
               
108-392
               

               
Cow position:
               
chr4:44449619-44449349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
60, 36
               

               
Conread position:
               
108-403
               

               
Cow position:
               
chr4:52832133-52831829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 38
               

               
Conread position:
               
108-407
               

               
Cow position:
               
chr4:1419107-1419414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
58, 46
               

               
Conread position:
               
108-408
               

               
Cow position:
               
chr4:19118891-19119210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 44
               

               
Conread position:
               
108-408
               

               
Cow position:
               
chr4:38157206-38156902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
60, 44
               

               
Conread position:
               
108-409
               

               
Cow position:
               
chr4:49158899-49158600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
169, 44
               

               
Conread position:
               
108-411
               

               
Cow position:
               
chr4:213904-214204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
82, 54
               

               
Conread position:
               
110-411
               

               
Cow position:
               
chr4:45249862-45250167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
159, 66
               

               
Conread position:
               
115-333
               

               
Cow position:
               
chr4:34503189-34503412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
13, 47
               

               
Conread position:
               
115-407
               

               
Cow position:
               
chr4:45724767-45725054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
144, 35
               

               
Conread position:
               
118-392
               

               
Cow position:
               
chr4:41899876-41900140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
151, 32
               

               
Conread position:
               
118-409
               

               
Cow position:
               
chr4:46136646-46136941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
50, 38
               

               
Conread position:
               
124-403
               

               
Cow position:
               
chr4:44184210-44183934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
47, 28
               

               
Conread position:
               
124-434
               

               
Cow position:
               
chr4:32693685-32694006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
42, 32
               

               
Conread position:
               
124-436
               

               
Cow position:
               
chr4:56005665-56005977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
145, 26
               

               
Conread position:
               
127-411
               

               
Cow position:
               
chr4:38822408-38822124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
128-411
               

               
Cow position:
               
chr4:45799779-45800075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
129-408
               

               
Cow position:
               
chr4:19333303-19333574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
140, 8
               

               
Conread position:
               
131-403
               

               
Cow position:
               
chr4:19102977-19102690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
132-429
               

               
Cow position:
               
chr4:60131131-60131439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
33, 18
               

               
Conread position:
               
133-403
               

               
Cow position:
               
chr4:11969372-11969640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
10, 21
               

               
Conread position:
               
134-409
               

               
Cow position:
               
chr4:69169565-69169841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
135, 18
               

               
Conread position:
               
136-334
               

               
Cow position:
               
chr4:49826166-49826369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
33, 16
               

               
Conread position:
               
136-427
               

               
Cow position:
               
chr4:19199379-19199075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
30, 292
               

               
Conread position:
               
137-326
               

               
Cow position:
               
chr4:66136691-66136497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
145-409
               

               
Cow position:
               
chr4:46566552-46566279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
23, 7
               

               
Conread position:
               
145-409
               

               
Cow position:
               
chr4:60719021-60719284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
22, 7
               

               
Conread position:
               
149-384
               

               
Cow position:
               
chr4:3268435-3268203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 95
               

               
Conread position:
               
150-435
               

               
Cow position:
               
chr4:47305007-47305297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
25, 270
               

               
Conread position:
               
150-436
               

               
Cow position:
               
chr4:38977962-38977673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
22, 44
               

               
Conread position:
               
151-406
               

               
Cow position:
               
chr4:8182713-8182445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 248
               

               
Conread position:
               
152-341
               

               
Cow position:
               
chr4:19323900-19324098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 183
               

               
Conread position:
               
152-408
               

               
Cow position:
               
chr4:69290811-69290550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
38, 176
               

               
Conread position:
               
152-411
               

               
Cow position:
               
chr4:65463569-65463319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
39, 29
               

               
Conread position:
               
154-408
               

               
Cow position:
               
chr4:59002204-59001947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 101
               

               
Conread position:
               
154-409
               

               
Cow position:
               
chr4:22071724-22071480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
115, 25
               

               
Conread position:
               
155-409
               

               
Cow position:
               
chr4:65173036-65173294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
14, 174
               

               
Conread position:
               
156-409
               

               
Cow position:
               
chr4:49212803-49212557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
157-407
               

               
Cow position:
               
chr4:12441834-12442099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
107, 34
               

               
Conread position:
               
157-407
               

               
Cow position:
               
chr4:13241564-13241829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
112, 34
               

               
Conread position:
               
163-291
               

               
Cow position:
               
chr4:19493497-19493628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
163-338
               

               
Cow position:
               
chr4:65131510-65131333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
163-389
               

               
Cow position:
               
chr4:48422820-48423040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
26, 140
               

               
Conread position:
               
163-408
               

               
Cow position:
               
chr4:34509783-34510020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
17, 166
               

               
Conread position:
               
163-411
               

               
Cow position:
               
chr4:17851308-17851067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
106, 30
               

               
Conread position:
               
164-397
               

               
Cow position:
               
chr4:32462619-32462859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 56
               

               
Conread position:
               
165-333
               

               
Cow position:
               
chr4:36744527-36744694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
69, 17
               

               
Conread position:
               
165-408
               

               
Cow position:
               
chr4:2680233-2680482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
168-403
               

               
Cow position:
               
chr4:26012346-26012598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
168-403
               

               
Cow position:
               
chr4:26830652-26830904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
168-403
               

               
Cow position:
               
chr4:38210028-38209789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 161
               

               
Conread position:
               
168-409
               

               
Cow position:
               
chr4:19292670-19292906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
168-409
               

               
Cow position:
               
chr4:46435272-46435526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
168-411
               

               
Cow position:
               
chr4:44773094-44772843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
169-339
               

               
Cow position:
               
chr4:10851500-10851327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
169-409
               

               
Cow position:
               
chr4:20142017-20141796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 66
               

               
Conread position:
               
169-411
               

               
Cow position:
               
chr4:19573237-19573483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
100, 21
               

               
Conread position:
               
169-411
               

               
Cow position:
               
chr4:47125897-47125644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
170-403
               

               
Cow position:
               
chr4:42232074-42231847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
23, 79
               

               
Conread position:
               
170-411
               

               
Cow position:
               
chr4:23190719-23190475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
99, 21
               

               
Conread position:
               
171-310
               

               
Cow position:
               
chr4:61478557-61478699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
171-411
               

               
Cow position:
               
chr4:19431743-19431496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
98, 15
               

               
Conread position:
               
171-435
               

               
Cow position:
               
chr4:28841367-28841636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
8, 208
               

               
Conread position:
               
172-408
               

               
Cow position:
               
chr4:65753300-65753047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
7, 222
               

               
Conread position:
               
172-415
               

               
Cow position:
               
chr4:1177662-1177911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
173-395
               

               
Cow position:
               
chr4:60506229-60506454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
12, 73
               

               
Conread position:
               
174-340
               

               
Cow position:
               
chr4:60443085-60442918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
95, 72
               

               
Conread position:
               
174-411
               

               
Cow position:
               
chr4:68590733-68590963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
95, 18
               

               
Conread position:
               
174-415
               

               
Cow position:
               
chr4:21161061-21161306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
95, 18
               

               
Conread position:
               
175-400
               

               
Cow position:
               
chr4:18951928-18952161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
175-402
               

               
Cow position:
               
chr4:60141561-60141342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
94, 52
               

               
Conread position:
               
175-411
               

               
Cow position:
               
chr4:16221923-16221677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
15, 214
               

               
Conread position:
               
176-397
               

               
Cow position:
               
chr4:38358862-38358643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
93, 14
               

               
Conread position:
               
176-406
               

               
Cow position:
               
chr4:25761-25541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
128, 17
               

               
Conread position:
               
176-432
               

               
Cow position:
               
chr4:1646136-1645866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
178-409
               

               
Cow position:
               
chr4:10558495-10558728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 204
               

               
Conread position:
               
179-313
               

               
Cow position:
               
chr4:42176514-42176377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
180-408
               

               
Cow position:
               
chr4:60363311-60363542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
122, 88
               

               
Conread position:
               
180-436
               

               
Cow position:
               
chr4:12047833-12048101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
89, 205
               

               
Conread position:
               
181-400
               

               
Cow position:
               
chr4:48381343-48381573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
88, 66
               

               
Conread position:
               
181-403
               

               
Cow position:
               
chr4:14020461-14020685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
8, 65
               

               
Conread position:
               
182-339
               

               
Cow position:
               
chr4:54541675-54541515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
87, 139
               

               
Conread position:
               
182-397
               

               
Cow position:
               
chr4:62370279-62370489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
87, 122
               

               
Conread position:
               
182-408
               

               
Cow position:
               
chr4:10962605-10962393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
182-409
               

               
Cow position:
               
chr4:46883711-46883475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
182-411
               

               
Cow position:
               
chr4:31177789-31178016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
87, 24
               

               
Conread position:
               
182-436
               

               
Cow position:
               
chr4:3912646-3912384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
91, 241
               

               
Conread position:
               
183-409
               

               
Cow position:
               
chr4:60303051-60302823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
73, 153
               

               
Conread position:
               
183-411
               

               
Cow position:
               
chr4:26960005-26959772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
184-398
               

               
Cow position:
               
chr4:34653905-34653694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
11, 133
               

               
Conread position:
               
184-409
               

               
Cow position:
               
chr4:54391054-54390822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
6, 114
               

               
Conread position:
               
186-434
               

               
Cow position:
               
chr4:53189022-53189277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
188-335
               

               
Cow position:
               
chr4:10472158-10472309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
53, 118
               

               
Conread position:
               
188-410
               

               
Cow position:
               
chr4:386423-386201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
81, 64
               

               
Conread position:
               
188-411
               

               
Cow position:
               
chr4:5727813-5728025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
80, 114
               

               
Conread position:
               
188-436
               

               
Cow position:
               
chr4:44854321-44854067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
81, 24
               

               
Conread position:
               
188-437
               

               
Cow position:
               
chr4:7698235-7698483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
117, 226
               

               
Conread position:
               
189-409
               

               
Cow position:
               
chr4:44903264-44903476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
80, 57
               

               
Conread position:
               
189-411
               

               
Cow position:
               
chr4:5790613-5790840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 38
               

               
Conread position:
               
193-386
               

               
Cow position:
               
chr4:26901301-26901491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
76, 110
               

               
Conread position:
               
193-400
               

               
Cow position:
               
chr4:69497087-69497296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
10, 187
               

               
Conread position:
               
194-408
               

               
Cow position:
               
chr4:21506981-21506773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
75, 124
               

               
Conread position:
               
197-402
               

               
Cow position:
               
chr4:34983518-34983319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
72, 40
               

               
Conread position:
               
197-412
               

               
Cow position:
               
chr4:69305605-69305830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
79, 131
               

               
Conread position:
               
198-399
               

               
Cow position:
               
chr4:47038746-47038951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
198-407
               

               
Cow position:
               
chr4:33838821-33838613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 49
               

               
Conread position:
               
198-409
               

               
Cow position:
               
chr4:4295565-4295770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
71, 128
               

               
Conread position:
               
198-409
               

               
Cow position:
               
chr4:18099083-18098869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
198-409
               

               
Cow position:
               
chr4:19539258-19539040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
71, 202
               

               
Conread position:
               
198-411
               

               
Cow position:
               
chr4:4150033-4150232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
71, 49
               

               
Conread position:
               
198-419
               

               
Cow position:
               
chr4:27521532-27521763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 53
               

               
Conread position:
               
198-431
               

               
Cow position:
               
chr4:36717462-36717699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
71, 49
               

               
Conread position:
               
199-409
               

               
Cow position:
               
chr4:13918961-13919171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
70, 38
               

               
Conread position:
               
199-409
               

               
Cow position:
               
chr4:43916268-43916485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
199-409
               

               
Cow position:
               
chr4:60527160-60527373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
70, 168
               

               
Conread position:
               
199-411
               

               
Cow position:
               
chr4:50687881-50687671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 85
               

               
Conread position:
               
199-429
               

               
Cow position:
               
chr4:46560160-46560390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
70, 130
               

               
Conread position:
               
199-433
               

               
Cow position:
               
chr4:40995711-40995946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
73, 48
               

               
Conread position:
               
200-409
               

               
Cow position:
               
chr4:67393072-67393287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
200-433
               

               
Cow position:
               
chr4:61608984-61608751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 127
               

               
Conread position:
               
204-403
               

               
Cow position:
               
chr4:19496479-19496686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
204-409
               

               
Cow position:
               
chr4:29318091-29317876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
65, 189
               

               
Conread position:
               
205-406
               

               
Cow position:
               
chr4:41907596-41907393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
35, 30
               

               
Conread position:
               
206-408
               

               
Cow position:
               
chr4:13995374-13995581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
63, 41
               

               
Conread position:
               
207-403
               

               
Cow position:
               
chr4:42044988-42044789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
17, 187
               

               
Conread position:
               
207-437
               

               
Cow position:
               
chr4:39007495-39007717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
62, 40
               

               
Conread position:
               
209-409
               

               
Cow position:
               
chr4:62794373-62794164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
210-440
               

               
Cow position:
               
chr4:5964682-5964915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 5
               

               
Conread position:
               
212-370
               

               
Cow position:
               
chr4:54650492-54650331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
31, 119
               

               
Conread position:
               
212-403
               

               
Cow position:
               
chr4:561625-561817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
57, 36
               

               
Conread position:
               
212-433
               

               
Cow position:
               
chr4:33360099-33360308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
57, 22
               

               
Conread position:
               
216-407
               

               
Cow position:
               
chr4:37991589-37991780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
53, 31
               

               
Conread position:
               
216-409
               

               
Cow position:
               
chr4:30769032-30769224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
88, 122
               

               
Conread position:
               
216-409
               

               
Cow position:
               
chr4:32601834-32602020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 44
               

               
Conread position:
               
217-399
               

               
Cow position:
               
chr4:27511542-27511730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
217-409
               

               
Cow position:
               
chr4:56395510-56395708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
28, 14
               

               
Conread position:
               
217-409
               

               
Cow position:
               
chr4:56410343-56410537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
52, 79
               

               
Conread position:
               
217-409
               

               
Cow position:
               
chr4:63078220-63078418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
52, 82
               

               
Conread position:
               
217-428
               

               
Cow position:
               
chr4:42347482-42347698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 24
               

               
Conread position:
               
217-441
               

               
Cow position:
               
chr4:53347972-53347756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
190, 34
               

               
Conread position:
               
218-398
               

               
Cow position:
               
chr4:19325258-19325444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
218-418
               

               
Cow position:
               
chr4:61887635-61887842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
220-409
               

               
Cow position:
               
chr4:68159457-68159271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
49, 76
               

               
Conread position:
               
220-425
               

               
Cow position:
               
chr4:12245213-12245419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
84, 50
               

               
Conread position:
               
220-432
               

               
Cow position:
               
chr4:23059855-23059636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
220-434
               

               
Cow position:
               
chr4:42374155-42373938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
221-399
               

               
Cow position:
               
chr4:19122874-19123052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
48, 100
               

               
Conread position:
               
221-409
               

               
Cow position:
               
chr4:54785925-54785738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
48, 10
               

               
Conread position:
               
221-411
               

               
Cow position:
               
chr4:51083336-51083146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
48, 96
               

               
Conread position:
               
223-409
               

               
Cow position:
               
chr4:35291024-35291215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
224-409
               

               
Cow position:
               
chr4:39010054-39010245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
45, 93
               

               
Conread position:
               
226-409
               

               
Cow position:
               
chr4:47048124-47048306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
44, 101
               

               
Conread position:
               
227-425
               

               
Cow position:
               
chr4:50494779-50494987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
227-432
               

               
Cow position:
               
chr4:3519429-3519629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
43, 100
               

               
Conread position:
               
227-434
               

               
Cow position:
               
chr4:21275593-21275397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
42, 76
               

               
Conread position:
               
228-408
               

               
Cow position:
               
chr4:45483807-45483995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
41, 98
               

               
Conread position:
               
228-411
               

               
Cow position:
               
chr4:45963892-45964085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
228-435
               

               
Cow position:
               
chr4:24163947-24163738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
77, 193
               

               
Conread position:
               
228-435
               

               
Cow position:
               
chr4:58045626-58045415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
228-459
               

               
Cow position:
               
chr4:5250196-5250432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 199
               

               
Conread position:
               
231-370
               

               
Cow position:
               
chr4:479780-479640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
38, 90
               

               
Conread position:
               
231-411
               

               
Cow position:
               
chr4:67109115-67109301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
231-441
               

               
Cow position:
               
chr4:45773474-45773688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
42, 186
               

               
Conread position:
               
235-403
               

               
Cow position:
               
chr4:38940928-38940756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
235-403
               

               
Cow position:
               
chr4:51026367-51026537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
6, 19
               

               
Conread position:
               
235-408
               

               
Cow position:
               
chr4:13508225-13508048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 97
               

               
Conread position:
               
235-426
               

               
Cow position:
               
chr4:27656993-27657180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
34, 12
               

               
Conread position:
               
238-403
               

               
Cow position:
               
chr4:22215492-22215327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
31, 89
               

               
Conread position:
               
238-409
               

               
Cow position:
               
chr4:28660532-28660354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
238-411
               

               
Cow position:
               
chr4:53380706-53380887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
31, 89
               

               
Conread position:
               
238-411
               

               
Cow position:
               
chr4:56307823-56307996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
31, 9
               

               
Conread position:
               
239-403
               

               
Cow position:
               
chr4:22331144-22331306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
30, 88
               

               
Conread position:
               
239-408
               

               
Cow position:
               
chr4:65291836-65291672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 65
               

               
Conread position:
               
242-407
               

               
Cow position:
               
chr4:61524455-61524620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
60, 75
               

               
Conread position:
               
242-428
               

               
Cow position:
               
chr4:34919247-34919061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
242-449
               

               
Cow position:
               
chr4:36876835-36876622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
243-408
               

               
Cow position:
               
chr4:17051262-17051093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
26, 111
               

               
Conread position:
               
243-411
               

               
Cow position:
               
chr4:2713836-2713663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
243-437
               

               
Cow position:
               
chr4:56746013-56746214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
247-396
               

               
Cow position:
               
chr4:60621568-60621416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 100
               

               
Conread position:
               
247-408
               

               
Cow position:
               
chr4:30943982-30944145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
248-400
               

               
Cow position:
               
chr4:39569232-39569380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
21, 79
               

               
Conread position:
               
248-401
               

               
Cow position:
               
chr4:36070731-36070886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
21, 93
               

               
Conread position:
               
248-409
               

               
Cow position:
               
chr4:28854246-28854083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
29, 79
               

               
Conread position:
               
248-426
               

               
Cow position:
               
chr4:68776964-68777150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
248-427
               

               
Cow position:
               
chr4:12713998-12713821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 80
               

               
Conread position:
               
248-427
               

               
Cow position:
               
chr4:20153520-20153345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
248-480
               

               
Cow position:
               
chr4:12716867-12716639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
21, 80
               

               
Conread position:
               
249-424
               

               
Cow position:
               
chr4:51617969-51617789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
249-427
               

               
Cow position:
               
chr4:2770103-2770283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
20, 79
               

               
Conread position:
               
250-409
               

               
Cow position:
               
chr4:299180-299342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
47, 76
               

               
Conread position:
               
252-432
               

               
Cow position:
               
chr4:19330736-19330557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
52, 103
               

               
Conread position:
               
254-411
               

               
Cow position:
               
chr4:12908408-12908563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
255-409
               

               
Cow position:
               
chr4:27425747-27425901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 72
               

               
Conread position:
               
256-403
               

               
Cow position:
               
chr4:63293496-63293644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
13, 73
               

               
Conread position:
               
256-410
               

               
Cow position:
               
chr4:42608776-42608932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
13, 5
               

               
Conread position:
               
258-411
               

               
Cow position:
               
chr4:62821017-62820859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 62
               

               
Conread position:
               
261-436
               

               
Cow position:
               
chr4:19503970-19504140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 66
               

               
Conread position:
               
268-408
               

               
Cow position:
               
chr4:19463594-19463739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
268-409
               

               
Cow position:
               
chr4:34544356-34544497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
271-409
               

               
Cow position:
               
chr4:10786087-10785948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
280-430
               

               
Cow position:
               
chr4:19496919-19496766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
22, 67
               

               
Conread position:
               
286-409
               

               
Cow position:
               
chr4:6202336-6202212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
15, 40
               

               
Conread position:
               
303-439
               

               
Cow position:
               
chr4:45386908-45387043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
113, 21
               

               
Conread position:
               
307-409
               

               
Cow position:
               
chr4:33151576-33151677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
317-427
               

               
Cow position:
               
chr4:64336178-64336068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.