Cow genome map

Conread name: Ova1-OVRM10133B11

Conread position: 1-226
Cow position: chr5:54713911-54713691 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 165, 50

Conread position: 1-228
Cow position: chr5:34915967-34916173 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 1-263
Cow position: chr5:13691749-13691490 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 168, 91

Conread position: 1-267
Cow position: chr5:34638711-34638965 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 108, 44

Conread position: 1-284
Cow position: chr5:61840012-61840287 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 197
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 165, 40

Conread position: 1-286
Cow position: chr5:52645250-52644979 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 199
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 165, 40

Conread position: 1-292
Cow position: chr5:55928768-55929051 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 201
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 157, 42

Conread position: 1-300
Cow position: chr5:20407841-20407563 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 219
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 188, 47

Conread position: 1-300
Cow position: chr5:58793789-58793492 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 228
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 165, 65

Conread position: 1-312
Cow position: chr5:57575591-57575901 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 95

Conread position: 1-314
Cow position: chr5:52000044-52000349 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 220
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 165, 91

Conread position: 1-316
Cow position: chr5:15598408-15598104 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 64

Conread position: 1-317
Cow position: chr5:45803886-45804194 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 226
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 199, 26

Conread position: 1-320
Cow position: chr5:20783450-20783759 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 224
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 181, 42

Conread position: 1-320
Cow position: chr5:63964347-63964031 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 228
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 172, 93

Conread position: 1-321
Cow position: chr5:6045113-6045434 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 94

Conread position: 1-327
Cow position: chr5:59326003-59325698 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 221
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 236, 44

Conread position: 1-330
Cow position: chr5:72564587-72564910 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 239
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 165, 64

Conread position: 1-334
Cow position: chr5:67243751-67244068 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 236
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 184, 96

Conread position: 1-335
Cow position: chr5:37808839-37808512 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 235
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 149, 44

Conread position: 1-336
Cow position: chr5:31640253-31640575 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 240
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 167, 42

Conread position: 1-337
Cow position: chr5:37646725-37646389 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 249
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 25, 72

Conread position: 1-339
Cow position: chr5:50533557-50533231 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 252
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 165, 36

Conread position: 1-340
Cow position: chr5:46510041-46509708 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 56

Conread position: 1-341
Cow position: chr5:43929908-43929577 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 46

Conread position: 1-349
Cow position: chr5:51935008-51935358 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 242
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 165, 93

Conread position: 1-368
Cow position: chr5:7193257-7193599 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 254
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 268, 25

Conread position: 1-374
Cow position: chr5:23168993-23168636 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 265
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 130, 34

Conread position: 1-378
Cow position: chr5:69461160-69461531 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 37

Conread position: 1-383
Cow position: chr5:47704308-47703924 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 271
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 121, 91

Conread position: 1-388
Cow position: chr5:20554924-20554558 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 263
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 178, 91

Conread position: 1-389
Cow position: chr5:17768318-17767946 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 11

Conread position: 1-389
Cow position: chr5:35826416-35826805 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 104

Conread position: 1-389
Cow position: chr5:65752682-65753067 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 42

Conread position: 1-390
Cow position: chr5:64137077-64137466 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 273
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 164, 34

Conread position: 1-392
Cow position: chr5:52040494-52040111 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 265
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 76, 52

Conread position: 1-394
Cow position: chr5:4507135-4506751 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 269
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 268, 91

Conread position: 1-394
Cow position: chr5:26097121-26097502 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 274
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 165, 33

Conread position: 1-394
Cow position: chr5:37645899-37646287 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 277
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 163, 59

Conread position: 1-394
Cow position: chr5:45705873-45706248 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 265
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 228, 44

Conread position: 1-396
Cow position: chr5:35123713-35123307 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 270
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 88, 34

Conread position: 1-397
Cow position: chr5:6504054-6503661 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 279
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 175, 40

Conread position: 1-397
Cow position: chr5:17063268-17062864 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 287
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 68, 27

Conread position: 1-397
Cow position: chr5:20127879-20128269 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 59

Conread position: 1-398
Cow position: chr5:26370523-26370901 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 269
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 268, 36

Conread position: 1-399
Cow position: chr5:17999669-17999279 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 266
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 164, 55

Conread position: 1-399
Cow position: chr5:42845775-42845380 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 288
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 118, 42

Conread position: 1-399
Cow position: chr5:48010021-48009664 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 276
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 158, 46

Conread position: 1-400
Cow position: chr5:50599879-50600264 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 56

Conread position: 1-400
Cow position: chr5:67932636-67932248 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 278
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 163, 17

Conread position: 1-401
Cow position: chr5:30844936-30845325 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 36

Conread position: 1-403
Cow position: chr5:44994212-44993818 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 279
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 157, 40

Conread position: 1-403
Cow position: chr5:62172244-62172619 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 34

Conread position: 1-403
Cow position: chr5:66257467-66257855 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 47

Conread position: 1-404
Cow position: chr5:65776560-65776155 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 285
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 165, 95

Conread position: 1-406
Cow position: chr5:14314347-14314740 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 97

Conread position: 1-406
Cow position: chr5:64176295-64175906 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 96

Conread position: 1-407
Cow position: chr5:39936928-39937342 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 293
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 167, 44

Conread position: 1-407
Cow position: chr5:55967057-55966648 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 96

Conread position: 1-407
Cow position: chr5:72903402-72903015 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 276
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 131, 40

Conread position: 1-408
Cow position: chr5:2309738-2309332 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 100

Conread position: 1-408
Cow position: chr5:5111251-5110833 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 72

Conread position: 1-408
Cow position: chr5:7044885-7044480 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 96

Conread position: 1-408
Cow position: chr5:8024367-8023989 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 283
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 165, 47

Conread position: 1-408
Cow position: chr5:22242960-22242548 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 81

Conread position: 1-408
Cow position: chr5:45845870-45845464 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 96

Conread position: 1-408
Cow position: chr5:47871225-47870828 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 292
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 146, 89

Conread position: 1-408
Cow position: chr5:56028705-56028319 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 96

Conread position: 1-408
Cow position: chr5:57074509-57074111 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 60

Conread position: 1-408
Cow position: chr5:72035259-72034874 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 274
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 170, 34

Conread position: 1-409
Cow position: chr5:1105045-1104648 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 282
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 135, 89

Conread position: 1-409
Cow position: chr5:6572577-6572958 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 276
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 136, 89

Conread position: 1-409
Cow position: chr5:14550760-14550355 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 96

Conread position: 1-409
Cow position: chr5:17087203-17086791 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 107

Conread position: 1-409
Cow position: chr5:18573996-18574409 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 291
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 165, 42

Conread position: 1-409
Cow position: chr5:21617281-21617682 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 40

Conread position: 1-409
Cow position: chr5:26262848-26262458 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 283
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 153, 7

Conread position: 1-409
Cow position: chr5:29903697-29903316 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 44

Conread position: 1-409
Cow position: chr5:34561834-34562236 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 96

Conread position: 1-409
Cow position: chr5:34977014-34976613 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 272
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 268, 47

Conread position: 1-409
Cow position: chr5:35969368-35969767 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 44

Conread position: 1-409
Cow position: chr5:37255530-37255106 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 277
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 70, 104

Conread position: 1-409
Cow position: chr5:40152301-40152714 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 287
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 162, 50

Conread position: 1-409
Cow position: chr5:44028476-44028083 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 44

Conread position: 1-409
Cow position: chr5:47601642-47602035 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 29

Conread position: 1-409
Cow position: chr5:47756594-47756999 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 279
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 104, 126

Conread position: 1-409
Cow position: chr5:52165357-52164946 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 93

Conread position: 1-409
Cow position: chr5:52667853-52668266 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 289
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 170, 20

Conread position: 1-409
Cow position: chr5:53835540-53835948 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 34

Conread position: 1-409
Cow position: chr5:57935288-57934893 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 96

Conread position: 1-409
Cow position: chr5:65941428-65941023 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 92

Conread position: 1-410
Cow position: chr5:11668353-11667956 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 42

Conread position: 1-410
Cow position: chr5:30302721-30303109 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 53

Conread position: 1-410
Cow position: chr5:45472091-45472502 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 297
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 139, 55

Conread position: 1-410
Cow position: chr5:56070678-56071085 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 94

Conread position: 1-410
Cow position: chr5:64139388-64139791 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 96

Conread position: 1-411
Cow position: chr5:5855705-5856089 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 277
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 169, 40

Conread position: 1-411
Cow position: chr5:16938182-16937805 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 284
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 188, 21

Conread position: 1-411
Cow position: chr5:28302914-28302528 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 290
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 110, 44

Conread position: 1-411
Cow position: chr5:32394426-32394831 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 279
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 34, 48

Conread position: 1-411
Cow position: chr5:32975726-32975329 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 283
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 165, 67

Conread position: 1-411
Cow position: chr5:59082370-59081962 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 90

Conread position: 1-411
Cow position: chr5:62107669-62107255 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 282
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 167, 91

Conread position: 1-415
Cow position: chr5:4322236-4322648 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 290
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 173, 88

Conread position: 1-418
Cow position: chr5:41164914-41165318 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 65

Conread position: 1-422
Cow position: chr5:64321574-64322001 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 102

Conread position: 1-426
Cow position: chr5:35208087-35208507 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 297
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 56, 92

Conread position: 1-429
Cow position: chr5:23140747-23140343 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 288
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 266, 44

Conread position: 1-430
Cow position: chr5:5938150-5938576 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 295
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 165, 44

Conread position: 1-431
Cow position: chr5:60210314-60209897 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 291
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 95, 80

Conread position: 1-432
Cow position: chr5:59631307-59631735 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 302
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 268, 92

Conread position: 1-434
Cow position: chr5:66338909-66339328 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 18

Conread position: 1-434
Cow position: chr5:71722886-71723327 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 302
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 34, 92

Conread position: 1-435
Cow position: chr5:40889458-40889044 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 44

Conread position: 1-435
Cow position: chr5:57266072-57265648 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 297
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 178, 87

Conread position: 1-435
Cow position: chr5:68265138-68264723 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 287
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 150, 90

Conread position: 1-437
Cow position: chr5:34506100-34505669 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 295
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 177, 44

Conread position: 1-437
Cow position: chr5:61600238-61600662 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 91

Conread position: 1-438
Cow position: chr5:32153490-32153057 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 303
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 170, 58

Conread position: 1-439
Cow position: chr5:17371876-17371440 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 287
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 88, 34

Conread position: 1-439
Cow position: chr5:50943328-50942901 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 109

Conread position: 1-443
Cow position: chr5:36868571-36868995 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 306
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 148, 42

Conread position: 1-452
Cow position: chr5:44447061-44446610 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 111

Conread position: 2-240
Cow position: chr5:60126200-60126429 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 166, 36

Conread position: 2-260
Cow position: chr5:6670371-6670119 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 187, 106

Conread position: 2-319
Cow position: chr5:65933105-65932807 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 218
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 267, 46

Conread position: 2-379
Cow position: chr5:68872018-68872392 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 266
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 164, 90

Conread position: 2-399
Cow position: chr5:4551958-4552352 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 261
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 106, 112

Conread position: 2-400
Cow position: chr5:65136110-65136475 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 269
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 34

Conread position: 2-403
Cow position: chr5:72895519-72895907 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 277
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 106, 33

Conread position: 2-406
Cow position: chr5:39447704-39447301 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 39

Conread position: 2-409
Cow position: chr5:31217232-31216826 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 269
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 86, 28

Conread position: 2-409
Cow position: chr5:52831269-52831705 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 288
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 86, 132

Conread position: 2-410
Cow position: chr5:50722873-50723276 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 45

Conread position: 2-411
Cow position: chr5:24996399-24995992 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 25

Conread position: 2-411
Cow position: chr5:30253568-30253969 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 41

Conread position: 2-430
Cow position: chr5:16893949-16893532 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 95

Conread position: 2-432
Cow position: chr5:61576366-61576797 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 297
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 166, 51

Conread position: 2-433
Cow position: chr5:3549951-3549552 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 311
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 166, 36

Conread position: 2-433
Cow position: chr5:15363717-15364117 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 95

Conread position: 3-267
Cow position: chr5:40357042-40356765 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 92, 9

Conread position: 3-267
Cow position: chr5:47313301-47313554 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 163, 21

Conread position: 3-333
Cow position: chr5:54086363-54086687 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 237
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 86, 40

Conread position: 3-337
Cow position: chr5:458309-458641 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 230
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 96, 34

Conread position: 3-339
Cow position: chr5:63987619-63987290 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 249
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 163, 26

Conread position: 3-382
Cow position: chr5:45170190-45170558 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 253
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 185, 89

Conread position: 3-399
Cow position: chr5:55756612-55756196 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 100

Conread position: 3-402
Cow position: chr5:58144776-58144384 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 271
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 163, 42

Conread position: 3-407
Cow position: chr5:21828692-21829089 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 45

Conread position: 3-408
Cow position: chr5:37941965-37941581 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 275
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 168, 41

Conread position: 3-409
Cow position: chr5:5257469-5257060 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 83

Conread position: 3-409
Cow position: chr5:9894298-9893898 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 10

Conread position: 3-409
Cow position: chr5:26467447-26467854 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 93

Conread position: 3-410
Cow position: chr5:28330504-28330112 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 272
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 207, 38

Conread position: 3-411
Cow position: chr5:69337655-69338043 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 60

Conread position: 3-429
Cow position: chr5:63647647-63647229 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 293
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 165, 22

Conread position: 4-409
Cow position: chr5:59100-58703 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 285
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 164, 43

Conread position: 5-339
Cow position: chr5:43992150-43992479 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 242
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 163, 43

Conread position: 5-395
Cow position: chr5:33414579-33414195 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 281
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 62, 30

Conread position: 5-397
Cow position: chr5:48828984-48829370 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 269
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 163, 87

Conread position: 5-399
Cow position: chr5:34049939-34050325 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 43

Conread position: 5-408
Cow position: chr5:12322971-12322585 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 38

Conread position: 5-408
Cow position: chr5:56014564-56014948 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 40

Conread position: 5-415
Cow position: chr5:30178681-30178269 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 43

Conread position: 5-429
Cow position: chr5:40039941-40039541 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 283
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 161, 60

Conread position: 5-430
Cow position: chr5:51053818-51053400 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 301
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 161, 34

Conread position: 6-399
Cow position: chr5:11540213-11539835 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 259
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 165, 29

Conread position: 6-424
Cow position: chr5:61725800-61726199 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 78

Conread position: 7-337
Cow position: chr5:30950088-30949762 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 90

Conread position: 8-390
Cow position: chr5:64697613-64697996 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 274
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 160, 71

Conread position: 8-396
Cow position: chr5:57327625-57328011 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 277
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 158, 84

Conread position: 8-403
Cow position: chr5:29827886-29828269 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 278
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 163, 27

Conread position: 8-411
Cow position: chr5:45225992-45225589 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 289
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 158, 35

Conread position: 8-432
Cow position: chr5:41010164-41009761 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 89

Conread position: 8-437
Cow position: chr5:56467537-56467924 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 289
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 9-184
Cow position: chr5:24616289-24616123 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 55, 84

Conread position: 9-225
Cow position: chr5:20344990-20345201 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 153, 44

Conread position: 9-327
Cow position: chr5:47323284-47323605 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 228
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 81, 64

Conread position: 9-400
Cow position: chr5:55176720-55177098 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 286
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 155, 83

Conread position: 9-407
Cow position: chr5:3771680-3772067 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 287
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 157, 36

Conread position: 9-409
Cow position: chr5:30629324-30628926 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 26

Conread position: 9-431
Cow position: chr5:27179497-27179915 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 292
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 144, 19

Conread position: 10-261
Cow position: chr5:56443116-56443350 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 166, 60

Conread position: 10-283
Cow position: chr5:16508925-16509204 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 52, 46

Conread position: 10-400
Cow position: chr5:55955740-55956128 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 76

Conread position: 10-411
Cow position: chr5:56524006-56524392 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 111

Conread position: 10-435
Cow position: chr5:36855047-36855458 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 278
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 156, 25

Conread position: 11-232
Cow position: chr5:27015516-27015726 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 177
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 154, 86

Conread position: 11-279
Cow position: chr5:14629980-14629716 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 156, 23

Conread position: 11-406
Cow position: chr5:12761287-12760896 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 268
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 15, 69

Conread position: 12-263
Cow position: chr5:32140871-32140631 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 154, 33

Conread position: 12-340
Cow position: chr5:54060110-54060434 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 235
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 153, 41

Conread position: 12-403
Cow position: chr5:16214524-16214902 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 258
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 153, 31

Conread position: 12-440
Cow position: chr5:58519568-58519158 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 299
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 257, 31

Conread position: 13-410
Cow position: chr5:55068543-55068928 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 283
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 22, 80

Conread position: 16-410
Cow position: chr5:35247270-35246878 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 21

Conread position: 17-340
Cow position: chr5:50821620-50821945 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 80

Conread position: 17-429
Cow position: chr5:55232951-55232576 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 284
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 252, 28

Conread position: 18-395
Cow position: chr5:12351947-12351599 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 45

Conread position: 18-396
Cow position: chr5:45397421-45397779 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 25

Conread position: 18-409
Cow position: chr5:3582415-3582782 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 20

Conread position: 18-409
Cow position: chr5:43858589-43858191 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 280
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 74, 26

Conread position: 18-411
Cow position: chr5:44673526-44673934 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 264
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 71, 93

Conread position: 19-409
Cow position: chr5:42050391-42050771 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 76

Conread position: 19-411
Cow position: chr5:30276537-30276916 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 78

Conread position: 20-339
Cow position: chr5:4032150-4031831 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 231
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 146, 39

Conread position: 20-409
Cow position: chr5:48154633-48154236 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 285
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 107, 30

Conread position: 20-423
Cow position: chr5:47696598-47696218 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 279
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 139, 39

Conread position: 20-437
Cow position: chr5:46512922-46512512 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 76

Conread position: 21-409
Cow position: chr5:66972269-66972657 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 282
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 145, 73

Conread position: 24-406
Cow position: chr5:40109347-40109708 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 24

Conread position: 25-328
Cow position: chr5:39874972-39875269 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 207
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 144, 8

Conread position: 25-403
Cow position: chr5:56877338-56877691 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 269
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 152, 20

Conread position: 25-409
Cow position: chr5:35459445-35459069 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 267
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 141, 34

Conread position: 25-411
Cow position: chr5:25495500-25495122 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 283
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 111, 22

Conread position: 26-348
Cow position: chr5:19523742-19524068 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 25, 38

Conread position: 26-438
Cow position: chr5:61809838-61809440 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 272
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 102, 64

Conread position: 27-340
Cow position: chr5:16206308-16205999 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 234
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 35, 71

Conread position: 27-407
Cow position: chr5:19278853-19278478 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 265
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 11, 71

Conread position: 28-283
Cow position: chr5:63865644-63865893 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 137, 69

Conread position: 28-406
Cow position: chr5:29061081-29060715 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 255
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 63, 13

Conread position: 30-411
Cow position: chr5:42064052-42064436 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 261
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 136, 29

Conread position: 31-335
Cow position: chr5:3204685-3204977 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 209
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 135, 55

Conread position: 33-254
Cow position: chr5:21964140-21964357 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 130, 8

Conread position: 33-284
Cow position: chr5:65883922-65883673 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 133, 59

Conread position: 33-291
Cow position: chr5:32696967-32696717 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 8, 47

Conread position: 33-400
Cow position: chr5:20779533-20779181 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 251
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 10, 89

Conread position: 33-400
Cow position: chr5:74643815-74643466 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 14

Conread position: 34-410
Cow position: chr5:29680932-29681322 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 253
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 146

Conread position: 34-411
Cow position: chr5:66581818-66582199 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 275
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 132, 58

Conread position: 34-415
Cow position: chr5:70952021-70951659 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 61

Conread position: 35-399
Cow position: chr5:30267042-30266668 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 244
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 62, 13

Conread position: 36-399
Cow position: chr5:55259284-55259625 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 244
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 224, 56

Conread position: 36-407
Cow position: chr5:35763135-35763469 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 266
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 150, 29

Conread position: 37-408
Cow position: chr5:25035384-25035028 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 19

Conread position: 37-438
Cow position: chr5:19335932-19335522 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 287
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 16, 55

Conread position: 38-385
Cow position: chr5:64027149-64026812 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 63

Conread position: 39-358
Cow position: chr5:7755702-7755387 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 57

Conread position: 39-408
Cow position: chr5:57101916-57101571 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 268
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 145, 42

Conread position: 42-409
Cow position: chr5:36624096-36624478 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 247
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 147

Conread position: 42-409
Cow position: chr5:73168135-73167787 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 245
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 227, 21

Conread position: 43-332
Cow position: chr5:14473549-14473255 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 208
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 123, 10

Conread position: 43-409
Cow position: chr5:29097223-29097589 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 255
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 122, 61

Conread position: 43-409
Cow position: chr5:44848159-44847800 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 243
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 134, 16

Conread position: 45-339
Cow position: chr5:34300782-34301071 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 217
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 121, 52

Conread position: 45-396
Cow position: chr5:63234989-63234609 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 268
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 48, 11

Conread position: 45-409
Cow position: chr5:991332-991701 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 51

Conread position: 47-334
Cow position: chr5:54375660-54375352 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 36, 115

Conread position: 48-336
Cow position: chr5:45273632-45273350 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 194
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 118, 49

Conread position: 48-339
Cow position: chr5:54768041-54767754 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 118, 44

Conread position: 48-415
Cow position: chr5:64140399-64140771 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 257
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 117, 42

Conread position: 49-340
Cow position: chr5:44726456-44726179 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 206
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 220, 46

Conread position: 49-401
Cow position: chr5:66366388-66366727 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 252
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 75, 42

Conread position: 49-409
Cow position: chr5:7057537-7057170 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 254
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 13, 44

Conread position: 51-397
Cow position: chr5:17555173-17554820 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 42

Conread position: 52-409
Cow position: chr5:18289002-18289345 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 255
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 114, 40

Conread position: 52-411
Cow position: chr5:12434409-12434764 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 263
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 41, 19

Conread position: 53-322
Cow position: chr5:56680121-56680395 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 113, 39

Conread position: 53-409
Cow position: chr5:64181701-64181362 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 246
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 110, 39

Conread position: 54-403
Cow position: chr5:22666968-22667291 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 42

Conread position: 55-337
Cow position: chr5:67212223-67212513 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 196
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 42, 67

Conread position: 60-336
Cow position: chr5:49440991-49440724 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 206
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 106, 35

Conread position: 60-341
Cow position: chr5:23678824-23678544 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 203
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 7, 33

Conread position: 66-319
Cow position: chr5:13717684-13717434 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 26

Conread position: 66-411
Cow position: chr5:12901802-12902148 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 243
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 125, 28

Conread position: 67-428
Cow position: chr5:61999654-61999312 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 246
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 202, 25

Conread position: 72-436
Cow position: chr5:43371305-43370941 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 262
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 115, 20

Conread position: 77-396
Cow position: chr5:68718758-68719081 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 225
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 19, 171

Conread position: 78-428
Cow position: chr5:56137040-56136677 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 240
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 29, 79

Conread position: 82-407
Cow position: chr5:30232802-30233135 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 239
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 24, 39

Conread position: 87-403
Cow position: chr5:29460114-29460422 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 213
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 227, 18

Conread position: 92-335
Cow position: chr5:35125957-35126206 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 73, 15

Conread position: 92-340
Cow position: chr5:57640066-57639819 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 18

Conread position: 93-411
Cow position: chr5:50575690-50575997 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 223
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 73, 14

Conread position: 95-409
Cow position: chr5:33560826-33560511 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 220
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 70, 12

Conread position: 95-427
Cow position: chr5:41935749-41935409 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 239
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 56, 18

Conread position: 99-340
Cow position: chr5:55019204-55019451 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 51

Conread position: 99-341
Cow position: chr5:58446713-58446965 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 53, 9

Conread position: 99-399
Cow position: chr5:53946806-53947116 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 213
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 48, 9

Conread position: 99-409
Cow position: chr5:36039096-36038777 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 41

Conread position: 99-409
Cow position: chr5:46681805-46681496 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 221
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 9, 25

Conread position: 102-337
Cow position: chr5:69636147-69636377 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 167, 50

Conread position: 104-409
Cow position: chr5:26133170-26132868 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 207
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 165, 11

Conread position: 104-434
Cow position: chr5:4280365-4280696 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 225
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 62, 16

Conread position: 107-339
Cow position: chr5:1087279-1087047 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 59, 29

Conread position: 107-395
Cow position: chr5:3002834-3003119 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 192
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 119, 45

Conread position: 107-397
Cow position: chr5:57527001-57526712 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 193
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 162, 45

Conread position: 107-403
Cow position: chr5:44796814-44796515 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 205
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 58, 45

Conread position: 107-409
Cow position: chr5:7646647-7646943 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 202
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 160, 15

Conread position: 107-409
Cow position: chr5:49919840-49920152 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 206
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 37

Conread position: 107-410
Cow position: chr5:71015963-71015657 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 203
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 73

Conread position: 107-411
Cow position: chr5:31475601-31475912 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 202
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 42

Conread position: 107-411
Cow position: chr5:33833961-33834269 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 213
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 76, 45

Conread position: 107-411
Cow position: chr5:49474628-49474325 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 225
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 59, 16

Conread position: 107-411
Cow position: chr5:57768065-57767759 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 209
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 24, 46

Conread position: 107-411
Cow position: chr5:61914487-61914800 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 211
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 137, 45

Conread position: 107-432
Cow position: chr5:63240892-63241227 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 228
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 17

Conread position: 107-437
Cow position: chr5:64555450-64555784 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 227
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 59, 15

Conread position: 108-339
Cow position: chr5:64592176-64591940 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 59, 36

Conread position: 108-366
Cow position: chr5:60183719-60183984 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 60, 44

Conread position: 108-406
Cow position: chr5:14921012-14920702 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 216
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 35, 109

Conread position: 108-407
Cow position: chr5:60016085-60016389 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 218
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 58, 44

Conread position: 108-409
Cow position: chr5:12557374-12557060 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 56, 44

Conread position: 108-411
Cow position: chr5:43402818-43403138 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 44

Conread position: 108-411
Cow position: chr5:56548496-56548795 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 38, 75

Conread position: 108-436
Cow position: chr5:65140205-65140555 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 233
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 40, 109

Conread position: 109-337
Cow position: chr5:62378710-62378933 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 160, 43

Conread position: 109-396
Cow position: chr5:66551980-66551678 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 56, 43

Conread position: 110-335
Cow position: chr5:7697925-7698151 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 171, 44

Conread position: 110-403
Cow position: chr5:35976441-35976715 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 204
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 159, 68

Conread position: 111-409
Cow position: chr5:19752226-19752528 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 227
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 56, 39

Conread position: 113-388
Cow position: chr5:57419868-57419590 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 183
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 59, 75

Conread position: 113-406
Cow position: chr5:57756108-57755810 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 53, 40

Conread position: 119-399
Cow position: chr5:61771043-61771339 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 198
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 33

Conread position: 119-411
Cow position: chr5:6439104-6438796 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 33

Conread position: 121-411
Cow position: chr5:43604074-43604368 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 198
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 45, 31

Conread position: 123-372
Cow position: chr5:17602271-17602015 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 13, 94

Conread position: 125-409
Cow position: chr5:52729081-52728784 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 206
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 8

Conread position: 126-409
Cow position: chr5:59627038-59626743 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 26

Conread position: 126-412
Cow position: chr5:11769204-11769502 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 199
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 20, 27

Conread position: 127-407
Cow position: chr5:7012911-7012624 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 196
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 41, 29

Conread position: 127-411
Cow position: chr5:30247587-30247296 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 204
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 26, 181

Conread position: 128-317
Cow position: chr5:26150483-26150287 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 38, 24

Conread position: 128-396
Cow position: chr5:34109121-34108843 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 187
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 22

Conread position: 130-433
Cow position: chr5:66530858-66531165 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 214
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 8

Conread position: 132-409
Cow position: chr5:61455787-61456074 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 34, 20

Conread position: 136-411
Cow position: chr5:14345149-14344865 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 191
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 30, 14

Conread position: 138-429
Cow position: chr5:57393354-57393058 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 202
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 28, 63

Conread position: 141-409
Cow position: chr5:49342099-49341808 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 211
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 23, 0

Conread position: 145-340
Cow position: chr5:56339065-56338865 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 29, 7

Conread position: 145-408
Cow position: chr5:61784773-61784499 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 185
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 7

Conread position: 145-408
Cow position: chr5:63192787-63192528 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 23, 7

Conread position: 145-409
Cow position: chr5:42670908-42670646 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 90, 7

Conread position: 145-410
Cow position: chr5:45404996-45405275 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 190
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 7

Conread position: 150-332
Cow position: chr5:45126621-45126800 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 119, 25

Conread position: 150-385
Cow position: chr5:38068707-38068467 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 174

Conread position: 150-409
Cow position: chr5:31052344-31052615 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 202
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 119, 221

Conread position: 150-463
Cow position: chr5:51555112-51554803 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 173
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 119, 33

Conread position: 151-327
Cow position: chr5:35982781-35982592 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 151-403
Cow position: chr5:12654940-12654688 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 98, 20

Conread position: 152-407
Cow position: chr5:20288303-20288033 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 154-340
Cow position: chr5:4166607-4166800 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 103

Conread position: 157-407
Cow position: chr5:73253381-73253630 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 181
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 17, 91

Conread position: 162-400
Cow position: chr5:51065508-51065733 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 108, 9

Conread position: 163-327
Cow position: chr5:56517080-56517248 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 91

Conread position: 163-351
Cow position: chr5:67118396-67118587 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 26, 159

Conread position: 163-383
Cow position: chr5:57686763-57686540 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 161

Conread position: 163-394
Cow position: chr5:72006515-72006285 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 20, 184

Conread position: 163-408
Cow position: chr5:8736312-8736051 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 31, 109

Conread position: 163-408
Cow position: chr5:40241723-40241960 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 104, 79

Conread position: 163-410
Cow position: chr5:26549164-26548915 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 166

Conread position: 163-430
Cow position: chr5:68537690-68537416 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 25, 84

Conread position: 163-441
Cow position: chr5:65883650-65883365 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 189
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 164-397
Cow position: chr5:48867486-48867255 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 156
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 105, 126

Conread position: 168-396
Cow position: chr5:49501842-49501604 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 8, 18

Conread position: 168-403
Cow position: chr5:33273674-33273918 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 18, 83

Conread position: 168-407
Cow position: chr5:57101543-57101301 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 17, 82

Conread position: 169-400
Cow position: chr5:66466301-66466531 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 20, 47

Conread position: 169-409
Cow position: chr5:51298730-51298488 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 30, 85

Conread position: 171-411
Cow position: chr5:62811808-62812056 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 171-437
Cow position: chr5:67679164-67679442 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 187
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 8, 21

Conread position: 172-409
Cow position: chr5:23208943-23209186 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 97, 0

Conread position: 172-411
Cow position: chr5:17104839-17105074 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 75

Conread position: 172-411
Cow position: chr5:39815504-39815271 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 97, 40

Conread position: 173-411
Cow position: chr5:4120010-4120258 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 174-403
Cow position: chr5:39035770-39036003 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 95, 17

Conread position: 174-403
Cow position: chr5:60523721-60523948 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 38, 75

Conread position: 175-409
Cow position: chr5:34915064-34914827 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 94, 0

Conread position: 175-409
Cow position: chr5:59627088-59627319 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 13, 186

Conread position: 175-411
Cow position: chr5:45187127-45186886 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 94, 18

Conread position: 175-432
Cow position: chr5:57062541-57062278 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 177
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 16, 156

Conread position: 176-335
Cow position: chr5:9170589-9170433 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 126, 14

Conread position: 176-407
Cow position: chr5:69099710-69099944 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 108

Conread position: 176-437
Cow position: chr5:74658655-74658921 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 175
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 128, 15

Conread position: 177-408
Cow position: chr5:15364261-15364497 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 159
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 92, 9

Conread position: 177-409
Cow position: chr5:22795209-22795433 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 180
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 92, 5

Conread position: 178-433
Cow position: chr5:17835165-17834909 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 91, 13

Conread position: 178-433
Cow position: chr5:29468289-29468028 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 171
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 179-403
Cow position: chr5:69383248-69383472 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 125

Conread position: 179-441
Cow position: chr5:6126832-6127088 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 90, 51

Conread position: 180-437
Cow position: chr5:50824586-50824841 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 196
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 89, 147

Conread position: 181-404
Cow position: chr5:72045679-72045455 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 65

Conread position: 181-411
Cow position: chr5:56060075-56059835 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 182-331
Cow position: chr5:9233994-9233841 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 141

Conread position: 182-403
Cow position: chr5:56860443-56860664 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 122, 79

Conread position: 182-405
Cow position: chr5:5017370-5017594 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 53, 32

Conread position: 182-409
Cow position: chr5:33918710-33918476 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 7, 32

Conread position: 182-410
Cow position: chr5:61049328-61049562 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 182-427
Cow position: chr5:50101380-50101132 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 72, 151

Conread position: 182-431
Cow position: chr5:52852966-52853216 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 7, 146

Conread position: 182-438
Cow position: chr5:46541059-46540800 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 69, 58

Conread position: 184-340
Cow position: chr5:44874191-44874348 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 120

Conread position: 184-392
Cow position: chr5:21223322-21223519 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 85, 29

Conread position: 184-403
Cow position: chr5:4267668-4267881 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 85, 140

Conread position: 185-411
Cow position: chr5:52137934-52138167 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 47, 179

Conread position: 188-407
Cow position: chr5:44810237-44810012 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 151
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 188-408
Cow position: chr5:30561934-30562154 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 81, 140

Conread position: 188-409
Cow position: chr5:6520013-6520233 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 62, 104

Conread position: 188-410
Cow position: chr5:25366101-25366327 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 40, 146

Conread position: 188-433
Cow position: chr5:60422968-60422719 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 164
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 81, 192

Conread position: 189-396
Cow position: chr5:39146980-39146767 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 189-433
Cow position: chr5:60515025-60514774 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 115, 0

Conread position: 190-369
Cow position: chr5:17605130-17604949 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 79, 133

Conread position: 192-409
Cow position: chr5:7177157-7177379 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 198-334
Cow position: chr5:35647355-35647495 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 198-378
Cow position: chr5:38168906-38169089 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 150
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 71, 124

Conread position: 198-388
Cow position: chr5:46704287-46704094 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 71, 0

Conread position: 198-397
Cow position: chr5:55942367-55942162 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 71, 0

Conread position: 198-406
Cow position: chr5:53935535-53935330 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 71, 16

Conread position: 198-409
Cow position: chr5:28681505-28681289 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 198-411
Cow position: chr5:17828467-17828248 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 95

Conread position: 198-429
Cow position: chr5:64060458-64060693 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 154
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 198-432
Cow position: chr5:52137042-52136804 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 75, 225

Conread position: 198-434
Cow position: chr5:60212596-60212842 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 198-435
Cow position: chr5:55965882-55965639 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 199-377
Cow position: chr5:51247118-51246937 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 79, 130

Conread position: 199-403
Cow position: chr5:71788706-71788914 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 132

Conread position: 199-403
Cow position: chr5:75228186-75227992 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 70, 105

Conread position: 199-408
Cow position: chr5:2240976-2240763 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 169
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 70, 35

Conread position: 200-389
Cow position: chr5:44196915-44196723 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 201-401
Cow position: chr5:47743643-47743840 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 68, 76

Conread position: 201-409
Cow position: chr5:26147606-26147815 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 166
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 68, 133

Conread position: 201-435
Cow position: chr5:54750822-54751065 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 202-429
Cow position: chr5:26167437-26167666 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 67, 198

Conread position: 204-409
Cow position: chr5:54312619-54312826 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 65, 195

Conread position: 205-428
Cow position: chr5:74039984-74039757 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 64, 150

Conread position: 206-335
Cow position: chr5:55849905-55850033 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 40

Conread position: 207-394
Cow position: chr5:38040543-38040356 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 62, 137

Conread position: 210-400
Cow position: chr5:75760250-75760050 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 63, 40

Conread position: 210-403
Cow position: chr5:44722488-44722292 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 94, 0

Conread position: 210-407
Cow position: chr5:37842255-37842054 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 58, 0

Conread position: 210-408
Cow position: chr5:51289567-51289375 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 59, 37

Conread position: 210-411
Cow position: chr5:35190134-35190335 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 162
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 59, 117

Conread position: 212-408
Cow position: chr5:11303139-11303330 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 92, 17

Conread position: 212-408
Cow position: chr5:34288224-34288028 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 158
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 57, 35

Conread position: 213-411
Cow position: chr5:19079279-19079472 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 56, 74

Conread position: 214-408
Cow position: chr5:1694060-1693866 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 55, 113

Conread position: 215-397
Cow position: chr5:16668726-16668908 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 54, 112

Conread position: 215-403
Cow position: chr5:49821457-49821652 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 54, 78

Conread position: 215-404
Cow position: chr5:44734696-44734505 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 62, 112

Conread position: 215-409
Cow position: chr5:6086314-6086114 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 216-396
Cow position: chr5:53980724-53980538 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 217-396
Cow position: chr5:54753221-54753035 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 217-399
Cow position: chr5:29256676-29256491 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 86

Conread position: 217-408
Cow position: chr5:15991608-15991419 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 52, 108

Conread position: 217-432
Cow position: chr5:19561419-19561196 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 217-437
Cow position: chr5:44312383-44312158 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 52, 15

Conread position: 218-406
Cow position: chr5:60100501-60100686 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 22, 108

Conread position: 218-408
Cow position: chr5:60153806-60153993 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 22, 108

Conread position: 220-409
Cow position: chr5:37933748-37933941 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 84, 185

Conread position: 220-411
Cow position: chr5:62995991-62996188 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 49, 107

Conread position: 220-434
Cow position: chr5:26894685-26894460 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 221-410
Cow position: chr5:3817652-3817459 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 222-384
Cow position: chr5:8146329-8146161 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 222-408
Cow position: chr5:57497388-57497200 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 47, 105

Conread position: 223-408
Cow position: chr5:40122573-40122382 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 223-409
Cow position: chr5:7676118-7675931 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 117

Conread position: 223-410
Cow position: chr5:12562723-12562532 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 42, 72

Conread position: 223-411
Cow position: chr5:74887863-74887670 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 224-411
Cow position: chr5:35394395-35394209 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 103

Conread position: 225-434
Cow position: chr5:56549405-56549619 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 72

Conread position: 226-407
Cow position: chr5:70591594-70591767 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 101

Conread position: 227-399
Cow position: chr5:60761702-60761525 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 11

Conread position: 228-394
Cow position: chr5:60741286-60741457 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 228-404
Cow position: chr5:47313576-47313757 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 228-407
Cow position: chr5:6876926-6876740 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 32

Conread position: 228-430
Cow position: chr5:46421628-46421845 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 205

Conread position: 230-433
Cow position: chr5:32975799-32976014 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 7, 160

Conread position: 232-409
Cow position: chr5:29895216-29895398 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 232-411
Cow position: chr5:55162672-55162858 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 237-408
Cow position: chr5:34918397-34918569 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 32, 91

Conread position: 237-411
Cow position: chr5:37253480-37253651 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 32, 81

Conread position: 238-408
Cow position: chr5:60207760-60207931 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 88

Conread position: 238-428
Cow position: chr5:37919433-37919247 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 31, 104

Conread position: 239-399
Cow position: chr5:69682296-69682130 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 239-400
Cow position: chr5:29599493-29599334 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 132
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 30, 88

Conread position: 239-408
Cow position: chr5:49207274-49207103 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 30, 88

Conread position: 239-408
Cow position: chr5:52849139-52849307 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 9

Conread position: 239-411
Cow position: chr5:52192376-52192209 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 105

Conread position: 239-411
Cow position: chr5:70572424-70572587 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 29

Conread position: 242-408
Cow position: chr5:34347678-34347507 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 23

Conread position: 242-409
Cow position: chr5:30221722-30221550 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 67

Conread position: 242-410
Cow position: chr5:36143040-36143206 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 57

Conread position: 242-411
Cow position: chr5:21721414-21721247 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 142
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 27, 85

Conread position: 242-411
Cow position: chr5:74065461-74065291 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 27, 77

Conread position: 244-401
Cow position: chr5:64843913-64843746 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 244-403
Cow position: chr5:9559479-9559634 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 25, 75

Conread position: 244-409
Cow position: chr5:52211629-52211464 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 25, 83

Conread position: 247-399
Cow position: chr5:59662997-59662840 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 247-403
Cow position: chr5:66287006-66287162 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 23, 98

Conread position: 247-408
Cow position: chr5:22957471-22957629 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 79

Conread position: 247-409
Cow position: chr5:25462149-25462310 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 20, 85

Conread position: 247-409
Cow position: chr5:34787635-34787799 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 132
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 22, 80

Conread position: 247-432
Cow position: chr5:15770394-15770202 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 11

Conread position: 247-433
Cow position: chr5:63300139-63300327 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 89

Conread position: 248-403
Cow position: chr5:4824210-4824374 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 248-407
Cow position: chr5:57447604-57447439 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 45

Conread position: 248-408
Cow position: chr5:46479180-46479021 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 79

Conread position: 248-409
Cow position: chr5:5030505-5030666 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 20

Conread position: 248-448
Cow position: chr5:67339945-67340142 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 17, 79

Conread position: 249-408
Cow position: chr5:75478852-75478692 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 20, 138

Conread position: 250-389
Cow position: chr5:25597896-25598036 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 19, 82

Conread position: 251-414
Cow position: chr5:6245598-6245430 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 18, 76

Conread position: 256-426
Cow position: chr5:47960191-47960020 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 13, 61

Conread position: 259-435
Cow position: chr5:19626651-19626829 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 10, 68

Conread position: 260-411
Cow position: chr5:58487449-58487602 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 72

Conread position: 265-411
Cow position: chr5:18578972-18579118 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 62

Conread position: 270-411
Cow position: chr5:74049909-74050053 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 271-408
Cow position: chr5:4728160-4728295 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 55

Conread position: 271-409
Cow position: chr5:34639208-34639351 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 272-409
Cow position: chr5:48104348-48104487 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 22, 55

Conread position: 303-411
Cow position: chr5:74690134-74690023 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 305-407
Cow position: chr5:55414316-55414215 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 306-409
Cow position: chr5:8149184-8149082 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 307-409
Cow position: chr5:20407349-20407247 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 314-438
Cow position: chr5:60595980-60595857 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Show alignments to all cow chromosomes.