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Cow genome map

           
Conread name:
           
Ova1-OVRM10138H04
        

               
Conread position:
               
13-226
               

               
Cow position:
               
chr13:12925837-12925628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
152, 46
               

               
Conread position:
               
14-203
               

               
Cow position:
               
chr13:37946888-37947078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 10
               

               
Conread position:
               
17-177
               

               
Cow position:
               
chr13:8369217-8369065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
18-210
               

               
Cow position:
               
chr13:17350412-17350220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
42, 111
               

               
Conread position:
               
19-200
               

               
Cow position:
               
chr13:8609491-8609671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
106, 42
               

               
Conread position:
               
21-225
               

               
Cow position:
               
chr13:3211607-3211400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
31, 198
               

               
Conread position:
               
22-211
               

               
Cow position:
               
chr13:25537681-25537488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
24-160
               

               
Cow position:
               
chr13:61166398-61166534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
40, 32
               

               
Conread position:
               
24-177
               

               
Cow position:
               
chr13:16187844-16187997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 84
               

               
Conread position:
               
24-182
               

               
Cow position:
               
chr13:6153730-6153890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
24-183
               

               
Cow position:
               
chr13:9643834-9643994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
24-191
               

               
Cow position:
               
chr13:17622338-17622173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
7, 38
               

               
Conread position:
               
24-195
               

               
Cow position:
               
chr13:10845648-10845485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
24-196
               

               
Cow position:
               
chr13:13176704-13176530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
24-196
               

               
Cow position:
               
chr13:29831384-29831557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
134, 36
               

               
Conread position:
               
24-200
               

               
Cow position:
               
chr13:51227690-51227865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
16, 24
               

               
Conread position:
               
24-202
               

               
Cow position:
               
chr13:5758288-5758469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
24-204
               

               
Cow position:
               
chr13:15192837-15193014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
88, 37
               

               
Conread position:
               
24-204
               

               
Cow position:
               
chr13:15991178-15991359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
43, 74
               

               
Conread position:
               
24-204
               

               
Cow position:
               
chr13:23270159-23270333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
24-208
               

               
Cow position:
               
chr13:52749425-52749603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
176, 37
               

               
Conread position:
               
24-210
               

               
Cow position:
               
chr13:827295-827111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
24-210
               

               
Cow position:
               
chr13:15281887-15282069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
42, 111
               

               
Conread position:
               
24-210
               

               
Cow position:
               
chr13:42200672-42200484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
24-214
               

               
Cow position:
               
chr13:6974213-6974023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
182, 163
               

               
Conread position:
               
24-214
               

               
Cow position:
               
chr13:11260323-11260136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 81
               

               
Conread position:
               
24-214
               

               
Cow position:
               
chr13:19393347-19393153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 115
               

               
Conread position:
               
24-217
               

               
Cow position:
               
chr13:17838002-17837809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-218
               

               
Cow position:
               
chr13:2414081-2413888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
24-218
               

               
Cow position:
               
chr13:13320847-13320656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
24-219
               

               
Cow position:
               
chr13:37521691-37521888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
37, 15
               

               
Conread position:
               
24-222
               

               
Cow position:
               
chr13:46181844-46181646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
160, 177
               

               
Conread position:
               
24-223
               

               
Cow position:
               
chr13:51115969-51116171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
46, 14
               

               
Conread position:
               
24-225
               

               
Cow position:
               
chr13:37981692-37981893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
44, 56
               

               
Conread position:
               
24-226
               

               
Cow position:
               
chr13:9900201-9900010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
31, 61
               

               
Conread position:
               
24-226
               

               
Cow position:
               
chr13:20271174-20271375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
148, 100
               

               
Conread position:
               
24-226
               

               
Cow position:
               
chr13:24230262-24230064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
24-226
               

               
Cow position:
               
chr13:36771367-36771572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
35, 77
               

               
Conread position:
               
24-226
               

               
Cow position:
               
chr13:51940789-51940583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
24-229
               

               
Cow position:
               
chr13:20174801-20174590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
81, 184
               

               
Conread position:
               
24-229
               

               
Cow position:
               
chr13:21275910-21275707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
24-229
               

               
Cow position:
               
chr13:46112019-46111819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
41, 114
               

               
Conread position:
               
24-230
               

               
Cow position:
               
chr13:17158822-17159031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
43, 176
               

               
Conread position:
               
24-232
               

               
Cow position:
               
chr13:62008165-62007948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
24-236
               

               
Cow position:
               
chr13:18491655-18491435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 171
               

               
Conread position:
               
24-236
               

               
Cow position:
               
chr13:44202053-44201846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
24, 37
               

               
Conread position:
               
24-255
               

               
Cow position:
               
chr13:1568976-1568751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 72
               

               
Conread position:
               
25-204
               

               
Cow position:
               
chr13:5910850-5911023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
36, 9
               

               
Conread position:
               
25-204
               

               
Cow position:
               
chr13:12614305-12614125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 8
               

               
Conread position:
               
26-199
               

               
Cow position:
               
chr13:51856834-51857008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
26-239
               

               
Cow position:
               
chr13:46516111-46515897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
27-142
               

               
Cow position:
               
chr13:20128714-20128600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
27-177
               

               
Cow position:
               
chr13:18243911-18243761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
27-182
               

               
Cow position:
               
chr13:8201433-8201589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
83, 77
               

               
Conread position:
               
27-189
               

               
Cow position:
               
chr13:19174642-19174804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
47, 79
               

               
Conread position:
               
27-192
               

               
Cow position:
               
chr13:49022816-49022984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
27-202
               

               
Cow position:
               
chr13:52055544-52055718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
27-202
               

               
Cow position:
               
chr13:55583243-55583071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
27-203
               

               
Cow position:
               
chr13:8555508-8555338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
27-203
               

               
Cow position:
               
chr13:24715293-24715114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
27-204
               

               
Cow position:
               
chr13:12546861-12547036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
27-204
               

               
Cow position:
               
chr13:16014861-16014683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
27-204
               

               
Cow position:
               
chr13:16020902-16020723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
26, 122
               

               
Conread position:
               
27-204
               

               
Cow position:
               
chr13:17822901-17823078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
34, 74
               

               
Conread position:
               
27-205
               

               
Cow position:
               
chr13:25695721-25695896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
27-205
               

               
Cow position:
               
chr13:49476135-49475949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
27-205
               

               
Cow position:
               
chr13:49520772-49520951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
75, 34
               

               
Conread position:
               
27-214
               

               
Cow position:
               
chr13:4664816-4664995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
157, 64
               

               
Conread position:
               
27-214
               

               
Cow position:
               
chr13:43184822-43185019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
32, 173
               

               
Conread position:
               
27-215
               

               
Cow position:
               
chr13:11321566-11321757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
27-217
               

               
Cow position:
               
chr13:17563786-17563598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
178, 36
               

               
Conread position:
               
27-218
               

               
Cow position:
               
chr13:7191029-7190824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
34, 154
               

               
Conread position:
               
27-219
               

               
Cow position:
               
chr13:19188350-19188157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
27-220
               

               
Cow position:
               
chr13:56034809-56035004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
42, 94
               

               
Conread position:
               
27-220
               

               
Cow position:
               
chr13:59170701-59170508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
170, 39
               

               
Conread position:
               
27-222
               

               
Cow position:
               
chr13:20231145-20231335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
27-223
               

               
Cow position:
               
chr13:19778799-19778999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
77, 51
               

               
Conread position:
               
27-225
               

               
Cow position:
               
chr13:55727950-55727754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
27-226
               

               
Cow position:
               
chr13:55162261-55162061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
43, 32
               

               
Conread position:
               
27-229
               

               
Cow position:
               
chr13:20360326-20360127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
27-229
               

               
Cow position:
               
chr13:25547536-25547734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
27-229
               

               
Cow position:
               
chr13:32283176-32282976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
27-229
               

               
Cow position:
               
chr13:52640900-52641100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
27-231
               

               
Cow position:
               
chr13:15041424-15041625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
84, 59
               

               
Conread position:
               
27-233
               

               
Cow position:
               
chr13:24110536-24110326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
26, 181
               

               
Conread position:
               
27-239
               

               
Cow position:
               
chr13:20115303-20115085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
83, 179
               

               
Conread position:
               
27-269
               

               
Cow position:
               
chr13:17611500-17611746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
31, 236
               

               
Conread position:
               
27-272
               

               
Cow position:
               
chr13:34261280-34261037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
27-274
               

               
Cow position:
               
chr13:24753932-24753694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
28-190
               

               
Cow position:
               
chr13:20649935-20650101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
28-200
               

               
Cow position:
               
chr13:8652390-8652567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
28-214
               

               
Cow position:
               
chr13:11096223-11096043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
180, 32
               

               
Conread position:
               
28-218
               

               
Cow position:
               
chr13:37503532-37503726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
34, 99
               

               
Conread position:
               
28-225
               

               
Cow position:
               
chr13:21283653-21283854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
33, 105
               

               
Conread position:
               
28-229
               

               
Cow position:
               
chr13:20137873-20137669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
25, 176
               

               
Conread position:
               
28-231
               

               
Cow position:
               
chr13:49824075-49823873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
55, 30
               

               
Conread position:
               
29-175
               

               
Cow position:
               
chr13:1042918-1043068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
29-181
               

               
Cow position:
               
chr13:60389445-60389593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
29-204
               

               
Cow position:
               
chr13:40722663-40722835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
123, 34
               

               
Conread position:
               
29-210
               

               
Cow position:
               
chr13:9593556-9593371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
36, 162
               

               
Conread position:
               
29-214
               

               
Cow position:
               
chr13:12875923-12876111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
31, 135
               

               
Conread position:
               
29-214
               

               
Cow position:
               
chr13:20473633-20473820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
8, 72
               

               
Conread position:
               
30-189
               

               
Cow position:
               
chr13:26120315-26120472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
30-196
               

               
Cow position:
               
chr13:6060960-6061128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
30-204
               

               
Cow position:
               
chr13:23856260-23856083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
7, 73
               

               
Conread position:
               
30-226
               

               
Cow position:
               
chr13:14771503-14771303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
12, 182
               

               
Conread position:
               
30-231
               

               
Cow position:
               
chr13:6861230-6861025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
31-204
               

               
Cow position:
               
chr13:20288700-20288521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
22, 51
               

               
Conread position:
               
31-218
               

               
Cow position:
               
chr13:41157450-41157264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
32-182
               

               
Cow position:
               
chr13:15739735-15739587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
15, 91
               

               
Conread position:
               
32-214
               

               
Cow position:
               
chr13:584827-585009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
28, 9
               

               
Conread position:
               
34-280
               

               
Cow position:
               
chr13:38278106-38278354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
34, 100
               

               
Conread position:
               
35-171
               

               
Cow position:
               
chr13:11955072-11955212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
35-172
               

               
Cow position:
               
chr13:42114060-42113923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
35-178
               

               
Cow position:
               
chr13:60393825-60393682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
35-204
               

               
Cow position:
               
chr13:5263243-5263409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
35-205
               

               
Cow position:
               
chr13:6342046-6342217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
30, 95
               

               
Conread position:
               
35-223
               

               
Cow position:
               
chr13:20879782-20879971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
26, 43
               

               
Conread position:
               
35-226
               

               
Cow position:
               
chr13:6616710-6616904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 179
               

               
Conread position:
               
35-226
               

               
Cow position:
               
chr13:23167055-23167254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
35-229
               

               
Cow position:
               
chr13:25579146-25579342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
32, 169
               

               
Conread position:
               
35-229
               

               
Cow position:
               
chr13:42672380-42672578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
26, 188
               

               
Conread position:
               
35-230
               

               
Cow position:
               
chr13:25926835-25926634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
35-231
               

               
Cow position:
               
chr13:60509076-60509274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
30, 163
               

               
Conread position:
               
35-236
               

               
Cow position:
               
chr13:52459440-52459639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
19, 89
               

               
Conread position:
               
36-195
               

               
Cow position:
               
chr13:43139173-43139333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
25, 93
               

               
Conread position:
               
36-231
               

               
Cow position:
               
chr13:43919221-43919416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
37-214
               

               
Cow position:
               
chr13:7149473-7149646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
38-210
               

               
Cow position:
               
chr13:8233034-8232868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
38-218
               

               
Cow position:
               
chr13:18166772-18166591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
22, 171
               

               
Conread position:
               
38-229
               

               
Cow position:
               
chr13:18929567-18929377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
23, 86
               

               
Conread position:
               
39-214
               

               
Cow position:
               
chr13:34873629-34873450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
40-204
               

               
Cow position:
               
chr13:14576246-14576085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
40-206
               

               
Cow position:
               
chr13:185570-185400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
43-203
               

               
Cow position:
               
chr13:40541072-40541232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
44-204
               

               
Cow position:
               
chr13:40491250-40491086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
44-217
               

               
Cow position:
               
chr13:4588901-4588724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 110
               

               
Conread position:
               
44-256
               

               
Cow position:
               
chr13:20579942-20579731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
52-235
               

               
Cow position:
               
chr13:6442087-6442262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
60-204
               

               
Cow position:
               
chr13:4404543-4404403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
63-195
               

               
Cow position:
               
chr13:50582807-50582943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
63-204
               

               
Cow position:
               
chr13:15997047-15996906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
63-204
               

               
Cow position:
               
chr13:37069358-37069217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
63-213
               

               
Cow position:
               
chr13:59461251-59461106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
140, 34
               

               
Conread position:
               
63-214
               

               
Cow position:
               
chr13:7046883-7046731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
71, 22
               

               
Conread position:
               
63-222
               

               
Cow position:
               
chr13:6183407-6183567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
63-223
               

               
Cow position:
               
chr13:18340546-18340385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
63-223
               

               
Cow position:
               
chr13:42640395-42640238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
143, 34
               

               
Conread position:
               
63-229
               

               
Cow position:
               
chr13:27181054-27180889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
64-191
               

               
Cow position:
               
chr13:33054361-33054488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
64-203
               

               
Cow position:
               
chr13:20520073-20519934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
64-239
               

               
Cow position:
               
chr13:2776300-2776125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
142, 165
               

               
Conread position:
               
65-223
               

               
Cow position:
               
chr13:51813925-51814078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
65-226
               

               
Cow position:
               
chr13:13775233-13775394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 7
               

               
Conread position:
               
66-208
               

               
Cow position:
               
chr13:44003709-44003569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
66-267
               

               
Cow position:
               
chr13:19750725-19750524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
77, 84
               

               
Conread position:
               
67-204
               

               
Cow position:
               
chr13:8699728-8699865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
67-229
               

               
Cow position:
               
chr13:18615393-18615230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
80, 136
               

               
Conread position:
               
69-204
               

               
Cow position:
               
chr13:16908224-16908089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
69-221
               

               
Cow position:
               
chr13:15143836-15143988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
143, 52
               

               
Conread position:
               
70-204
               

               
Cow position:
               
chr13:48554371-48554238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
71-217
               

               
Cow position:
               
chr13:36666269-36666414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
71-229
               

               
Cow position:
               
chr13:50768601-50768447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
49, 29
               

               
Conread position:
               
72-223
               

               
Cow position:
               
chr13:17813475-17813325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
84-206
               

               
Cow position:
               
chr13:37980766-37980887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
85-205
               

               
Cow position:
               
chr13:43787846-43787966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
85-205
               

               
Cow position:
               
chr13:43839685-43839805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
85-206
               

               
Cow position:
               
chr13:9884526-9884404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
87-214
               

               
Cow position:
               
chr13:30148574-30148702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
92-204
               

               
Cow position:
               
chr13:39398635-39398523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
97-214
               

               
Cow position:
               
chr13:11147036-11146918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
101-228
               

               
Cow position:
               
chr13:25520940-25521071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
101-274
               

               
Cow position:
               
chr13:9124899-9124729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
105, 51
               

               
Conread position:
               
105-236
               

               
Cow position:
               
chr13:6975874-6976006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
107-204
               

               
Cow position:
               
chr13:28524348-28524445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
108-230
               

               
Cow position:
               
chr13:15808734-15808611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
97, 42
               

               
Conread position:
               
109-229
               

               
Cow position:
               
chr13:6113559-6113680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
110-244
               

               
Cow position:
               
chr13:48127074-48126939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
121, 90
               

               
Conread position:
               
111-229
               

               
Cow position:
               
chr13:13796846-13796965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
112-234
               

               
Cow position:
               
chr13:51080406-51080284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
116, 89
               
Show alignments to all cow chromosomes.