Cow genome map
| Conread name: | Ova1-OVRM10138H04 |
| Conread position: | 13-214 |
| Cow position: | chr21:12739063-12739264 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 15, 159 |
| Conread position: | 18-223 |
| Cow position: | chr21:46132565-46132770 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-229 |
| Cow position: | chr21:20160669-20160877 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 21-214 |
| Cow position: | chr21:23322085-23321890 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 21-218 |
| Cow position: | chr21:3361020-3360825 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 40, 10 |
| Conread position: | 22-218 |
| Cow position: | chr21:45921064-45920867 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 40, 169 |
| Conread position: | 22-227 |
| Cow position: | chr21:1059072-1059276 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 43, 66 |
| Conread position: | 23-220 |
| Cow position: | chr21:47465124-47464928 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 29, 12 |
| Conread position: | 23-224 |
| Cow position: | chr21:395867-396063 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 24-175 |
| Cow position: | chr21:43357262-43357108 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 27, 14 |
| Conread position: | 24-176 |
| Cow position: | chr21:30607093-30606937 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 24-176 |
| Cow position: | chr21:40432446-40432594 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 24-178 |
| Cow position: | chr21:1591548-1591705 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 24-178 |
| Cow position: | chr21:20418688-20418531 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 24-179 |
| Cow position: | chr21:29405219-29405069 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 24-183 |
| Cow position: | chr21:39401590-39401746 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 56, 70 |
| Conread position: | 24-191 |
| Cow position: | chr21:19258820-19258983 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 160, 35 |
| Conread position: | 24-202 |
| Cow position: | chr21:41621120-41621300 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 24-204 |
| Cow position: | chr21:977147-976964 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 146, 37 |
| Conread position: | 24-204 |
| Cow position: | chr21:10673124-10673298 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 160, 15 |
| Conread position: | 24-204 |
| Cow position: | chr21:23586876-23587058 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 36, 159 |
| Conread position: | 24-204 |
| Cow position: | chr21:28030284-28030465 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 36, 108 |
| Conread position: | 24-204 |
| Cow position: | chr21:28919528-28919351 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 38, 137 |
| Conread position: | 24-204 |
| Cow position: | chr21:30835359-30835540 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 36, 80 |
| Conread position: | 24-204 |
| Cow position: | chr21:45971175-45970997 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 24-205 |
| Cow position: | chr21:5426937-5427115 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 24-206 |
| Cow position: | chr21:8206764-8206949 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 39, 138 |
| Conread position: | 24-210 |
| Cow position: | chr21:802311-802133 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 182, 32 |
| Conread position: | 24-212 |
| Cow position: | chr21:40589489-40589296 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 24-214 |
| Cow position: | chr21:10633644-10633453 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 105 |
| Conread position: | 24-214 |
| Cow position: | chr21:21907433-21907247 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 30, 74 |
| Conread position: | 24-218 |
| Cow position: | chr21:13585058-13584869 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 184, 35 |
| Conread position: | 24-218 |
| Cow position: | chr21:14760568-14760757 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 36, 74 |
| Conread position: | 24-218 |
| Cow position: | chr21:28989604-28989804 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 129 |
| Conread position: | 24-218 |
| Cow position: | chr21:45473758-45473567 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 24-221 |
| Cow position: | chr21:4399799-4400000 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 24-223 |
| Cow position: | chr21:3585371-3585172 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 43, 16 |
| Conread position: | 24-223 |
| Cow position: | chr21:10538256-10538060 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 24-223 |
| Cow position: | chr21:41974379-41974183 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 40, 99 |
| Conread position: | 24-225 |
| Cow position: | chr21:20152950-20153151 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 36, 159 |
| Conread position: | 24-226 |
| Cow position: | chr21:471673-471872 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 24-226 |
| Cow position: | chr21:42841604-42841399 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 27, 181 |
| Conread position: | 24-226 |
| Cow position: | chr21:47363742-47363537 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 36, 196 |
| Conread position: | 24-226 |
| Cow position: | chr21:47714009-47713809 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 29, 99 |
| Conread position: | 24-229 |
| Cow position: | chr21:17183919-17184118 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 160, 63 |
| Conread position: | 24-231 |
| Cow position: | chr21:28924106-28924311 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 183, 0 |
| Conread position: | 24-233 |
| Cow position: | chr21:29978764-29978554 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 42, 189 |
| Conread position: | 24-236 |
| Cow position: | chr21:32339741-32339532 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 165 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 24-242 |
| Cow position: | chr21:7768430-7768654 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 24-243 |
| Cow position: | chr21:1511287-1511507 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 18, 100 |
| Conread position: | 24-274 |
| Cow position: | chr21:957668-957918 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 37, 97 |
| Conread position: | 25-204 |
| Cow position: | chr21:18779974-18779799 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 29, 79 |
| Conread position: | 27-176 |
| Cow position: | chr21:34390976-34390826 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 27-193 |
| Cow position: | chr21:36789790-36789962 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 27-201 |
| Cow position: | chr21:3763740-3763569 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 27-201 |
| Cow position: | chr21:8235555-8235388 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 27-201 |
| Cow position: | chr21:11779530-11779368 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 27-203 |
| Cow position: | chr21:17890302-17890478 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-203 |
| Cow position: | chr21:33563009-33563179 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 27-203 |
| Cow position: | chr21:37706420-37706239 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 34, 17 |
| Conread position: | 27-204 |
| Cow position: | chr21:734595-734766 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 27-204 |
| Cow position: | chr21:3818209-3818385 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 157, 147 |
| Conread position: | 27-204 |
| Cow position: | chr21:13588761-13588936 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 27-204 |
| Cow position: | chr21:40266123-40266298 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 34, 90 |
| Conread position: | 27-214 |
| Cow position: | chr21:11360036-11360214 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 179, 116 |
| Conread position: | 27-214 |
| Cow position: | chr21:33580420-33580607 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 176, 88 |
| Conread position: | 27-217 |
| Cow position: | chr21:34151583-34151772 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 34, 102 |
| Conread position: | 27-218 |
| Cow position: | chr21:6051506-6051695 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 181, 8 |
| Conread position: | 27-220 |
| Cow position: | chr21:26244917-26245108 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 179, 32 |
| Conread position: | 27-222 |
| Cow position: | chr21:6624159-6624352 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 27-222 |
| Cow position: | chr21:6758346-6758537 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 27-222 |
| Cow position: | chr21:26648012-26647820 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 97 |
| Conread position: | 27-226 |
| Cow position: | chr21:8431103-8430902 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 32, 177 |
| Conread position: | 27-226 |
| Cow position: | chr21:10410219-10410416 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 34, 57 |
| Conread position: | 27-226 |
| Cow position: | chr21:42384509-42384707 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 27-229 |
| Cow position: | chr21:10264031-10264233 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 41, 155 |
| Conread position: | 27-229 |
| Cow position: | chr21:22718785-22718583 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 34, 115 |
| Conread position: | 27-229 |
| Cow position: | chr21:38918202-38918400 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 42, 25 |
| Conread position: | 27-229 |
| Cow position: | chr21:49700035-49699839 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 27-230 |
| Cow position: | chr21:31159402-31159602 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 183, 69 |
| Conread position: | 27-258 |
| Cow position: | chr21:14452235-14452465 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 28-204 |
| Cow position: | chr21:6713526-6713346 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 28-204 |
| Cow position: | chr21:10001075-10001252 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 42, 103 |
| Conread position: | 28-223 |
| Cow position: | chr21:36508241-36508429 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 28-226 |
| Cow position: | chr21:8546018-8545823 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 28-226 |
| Cow position: | chr21:24642520-24642712 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 34, 104 |
| Conread position: | 28-229 |
| Cow position: | chr21:868925-868721 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 33, 12 |
| Conread position: | 28-230 |
| Cow position: | chr21:44724365-44724172 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 28-274 |
| Cow position: | chr21:15584420-15584174 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 185 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 34, 173 |
| Conread position: | 29-204 |
| Cow position: | chr21:45329944-45329773 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 30, 35 |
| Conread position: | 29-214 |
| Cow position: | chr21:42501040-42501237 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 29-231 |
| Cow position: | chr21:10004886-10004683 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 32, 111 |
| Conread position: | 29-231 |
| Cow position: | chr21:23980179-23979979 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 29-232 |
| Cow position: | chr21:27429459-27429657 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 33, 11 |
| Conread position: | 29-238 |
| Cow position: | chr21:28429444-28429656 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 104, 23 |
| Conread position: | 31-204 |
| Cow position: | chr21:41828163-41827981 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 73, 36 |
| Conread position: | 32-194 |
| Cow position: | chr21:28955512-28955668 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 27, 55 |
| Conread position: | 32-214 |
| Cow position: | chr21:33725-33907 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 174, 24 |
| Conread position: | 32-214 |
| Cow position: | chr21:10118563-10118754 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 36, 59 |
| Conread position: | 35-205 |
| Cow position: | chr21:33414079-33413910 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 66 |
| Conread position: | 35-218 |
| Cow position: | chr21:17642977-17642796 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 27, 110 |
| Conread position: | 35-218 |
| Cow position: | chr21:28244476-28244664 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 26, 71 |
| Conread position: | 36-204 |
| Cow position: | chr21:39319406-39319233 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 36-204 |
| Cow position: | chr21:44251835-44251666 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 30, 20 |
| Conread position: | 38-203 |
| Cow position: | chr21:7583856-7584026 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 153 |
| Conread position: | 40-204 |
| Cow position: | chr21:30231684-30231522 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 130 |
| Conread position: | 43-214 |
| Cow position: | chr21:38900791-38900960 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 49-279 |
| Cow position: | chr21:17265980-17265747 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 18, 137 |
| Conread position: | 51-204 |
| Cow position: | chr21:42144850-42144999 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 63-203 |
| Cow position: | chr21:36763098-36763237 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 63-204 |
| Cow position: | chr21:30119730-30119871 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 63-204 |
| Cow position: | chr21:46809735-46809589 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 63-214 |
| Cow position: | chr21:34210043-34209893 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 140, 15 |
| Conread position: | 63-216 |
| Cow position: | chr21:37838030-37837878 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 63-224 |
| Cow position: | chr21:44592173-44592012 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 63-225 |
| Cow position: | chr21:8213242-8213078 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 145, 63 |
| Conread position: | 63-226 |
| Cow position: | chr21:46470222-46470383 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 141, 63 |
| Conread position: | 63-229 |
| Cow position: | chr21:24266529-24266363 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 138, 25 |
| Conread position: | 63-229 |
| Cow position: | chr21:25344897-25345062 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 63-229 |
| Cow position: | chr21:27677518-27677681 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 47, 41 |
| Conread position: | 63-234 |
| Cow position: | chr21:36682361-36682534 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 64-195 |
| Cow position: | chr21:7221303-7221172 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 64-204 |
| Cow position: | chr21:712979-713120 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 64-204 |
| Cow position: | chr21:22939804-22939947 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 64-205 |
| Cow position: | chr21:17062961-17063099 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 65-229 |
| Cow position: | chr21:40291708-40291551 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 65-233 |
| Cow position: | chr21:41610205-41610375 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 99, 138 |
| Conread position: | 66-194 |
| Cow position: | chr21:12207763-12207635 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 66-226 |
| Cow position: | chr21:13163898-13164059 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 69-214 |
| Cow position: | chr21:42562674-42562816 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 136, 23 |
| Conread position: | 70-204 |
| Cow position: | chr21:8687099-8686966 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 70-204 |
| Cow position: | chr21:13225758-13225892 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 70-205 |
| Cow position: | chr21:6736146-6736011 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 70-220 |
| Cow position: | chr21:30938629-30938472 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 72-195 |
| Cow position: | chr21:35647783-35647660 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 74-226 |
| Cow position: | chr21:28237659-28237508 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 132, 34 |
| Conread position: | 100-215 |
| Cow position: | chr21:6945447-6945563 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 100-248 |
| Cow position: | chr21:40305016-40305160 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 107-206 |
| Cow position: | chr21:30970015-30970114 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 107-217 |
| Cow position: | chr21:43265315-43265206 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 91, 101 |
| Conread position: | 107-226 |
| Cow position: | chr21:41737988-41738107 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 107-229 |
| Cow position: | chr21:21479221-21479101 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 107-231 |
| Cow position: | chr21:5214428-5214552 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 107-231 |
| Cow position: | chr21:7493193-7493070 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 108-223 |
| Cow position: | chr21:28617869-28617985 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 108-229 |
| Cow position: | chr21:16796932-16797053 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.