Cow genome map
| Conread name: | Ova1-OVRM10138H04 |
| Conread position: | 17-176 |
| Cow position: | chr26:22603097-22602936 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 17-220 |
| Cow position: | chr26:7315162-7314961 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 93, 39 |
| Conread position: | 18-218 |
| Cow position: | chr26:8352905-8353114 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 36, 178 |
| Conread position: | 19-218 |
| Cow position: | chr26:678035-677835 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 22-204 |
| Cow position: | chr26:6864963-6865154 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 38, 175 |
| Conread position: | 22-218 |
| Cow position: | chr26:16921886-16922081 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 47, 41 |
| Conread position: | 22-222 |
| Cow position: | chr26:30254680-30254485 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 186, 10 |
| Conread position: | 22-259 |
| Cow position: | chr26:21418503-21418273 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 73, 7 |
| Conread position: | 24-162 |
| Cow position: | chr26:21992052-21992190 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-172 |
| Cow position: | chr26:22249528-22249379 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 24-201 |
| Cow position: | chr26:18877008-18876835 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 24-202 |
| Cow position: | chr26:17057632-17057807 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 112, 15 |
| Conread position: | 24-202 |
| Cow position: | chr26:33857245-33857067 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 43, 128 |
| Conread position: | 24-204 |
| Cow position: | chr26:13021196-13021015 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 35, 76 |
| Conread position: | 24-205 |
| Cow position: | chr26:16549934-16550119 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 26 |
| Conread position: | 24-206 |
| Cow position: | chr26:14905862-14905676 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 56, 76 |
| Conread position: | 24-210 |
| Cow position: | chr26:1325716-1325894 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 184, 31 |
| Conread position: | 24-214 |
| Cow position: | chr26:9604512-9604703 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 184, 0 |
| Conread position: | 24-222 |
| Cow position: | chr26:22354363-22354561 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 146, 168 |
| Conread position: | 24-223 |
| Cow position: | chr26:10965644-10965445 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 160, 186 |
| Conread position: | 24-223 |
| Cow position: | chr26:33253370-33253168 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 38, 181 |
| Conread position: | 24-224 |
| Cow position: | chr26:11370861-11371055 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 7, 17 |
| Conread position: | 24-225 |
| Cow position: | chr26:9839590-9839399 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 24-226 |
| Cow position: | chr26:11263591-11263790 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 24-226 |
| Cow position: | chr26:26294247-26294045 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 42, 85 |
| Conread position: | 24-226 |
| Cow position: | chr26:32776558-32776358 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 40, 107 |
| Conread position: | 24-226 |
| Cow position: | chr26:32836190-32836395 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 182, 39 |
| Conread position: | 24-229 |
| Cow position: | chr26:4585259-4585061 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 82, 43 |
| Conread position: | 24-229 |
| Cow position: | chr26:12893476-12893279 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 24-229 |
| Cow position: | chr26:24240625-24240835 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 35, 80 |
| Conread position: | 24-230 |
| Cow position: | chr26:8700098-8699893 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 37, 177 |
| Conread position: | 25-200 |
| Cow position: | chr26:14578277-14578446 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 42, 135 |
| Conread position: | 26-214 |
| Cow position: | chr26:25526198-25526390 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 26-229 |
| Cow position: | chr26:11538482-11538686 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 44, 176 |
| Conread position: | 27-204 |
| Cow position: | chr26:613725-613543 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 36, 124 |
| Conread position: | 27-204 |
| Cow position: | chr26:32830034-32830210 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 11, 33 |
| Conread position: | 27-205 |
| Cow position: | chr26:3706747-3706922 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 27-208 |
| Cow position: | chr26:23671366-23671550 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 27-218 |
| Cow position: | chr26:8202804-8202997 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 133, 83 |
| Conread position: | 27-218 |
| Cow position: | chr26:34314642-34314837 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 27-223 |
| Cow position: | chr26:19774349-19774150 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 27-226 |
| Cow position: | chr26:24453954-24453754 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 178, 98 |
| Conread position: | 27-226 |
| Cow position: | chr26:33392344-33392547 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 10, 53 |
| Conread position: | 27-229 |
| Cow position: | chr26:31633681-31633882 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 28-204 |
| Cow position: | chr26:33011714-33011540 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 28-205 |
| Cow position: | chr26:8642898-8643072 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 32, 97 |
| Conread position: | 28-217 |
| Cow position: | chr26:19459638-19459836 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 28-221 |
| Cow position: | chr26:35449013-35449210 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 33, 193 |
| Conread position: | 28-226 |
| Cow position: | chr26:33475642-33475849 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 28-227 |
| Cow position: | chr26:22349061-22348860 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 14, 94 |
| Conread position: | 29-194 |
| Cow position: | chr26:30568703-30568543 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 31, 58 |
| Conread position: | 29-200 |
| Cow position: | chr26:23624091-23623919 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 20, 11 |
| Conread position: | 29-202 |
| Cow position: | chr26:25393985-25394167 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 30-225 |
| Cow position: | chr26:20291738-20291540 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 35-195 |
| Cow position: | chr26:33045042-33045201 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 35-206 |
| Cow position: | chr26:34108719-34108889 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 65, 87 |
| Conread position: | 35-225 |
| Cow position: | chr26:13818383-13818575 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 108, 154 |
| Conread position: | 35-229 |
| Cow position: | chr26:31903126-31903320 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 31, 174 |
| Conread position: | 36-229 |
| Cow position: | chr26:5836859-5836667 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 31, 64 |
| Conread position: | 36-245 |
| Cow position: | chr26:829764-829976 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 25, 196 |
| Conread position: | 37-214 |
| Cow position: | chr26:25074680-25074857 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 146 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 43-192 |
| Cow position: | chr26:17187065-17186920 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 46-218 |
| Cow position: | chr26:32571267-32571438 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 59, 15 |
| Conread position: | 58-225 |
| Cow position: | chr26:7157622-7157453 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 63-203 |
| Cow position: | chr26:28374454-28374314 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 63-226 |
| Cow position: | chr26:11672286-11672450 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 65-204 |
| Cow position: | chr26:32655618-32655478 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 52, 65 |
| Conread position: | 65-226 |
| Cow position: | chr26:16594508-16594351 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 66-212 |
| Cow position: | chr26:7224350-7224204 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 35, 30 |
| Conread position: | 66-229 |
| Cow position: | chr26:16435664-16435499 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 69-229 |
| Cow position: | chr26:17398571-17398730 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 70-210 |
| Cow position: | chr26:18381310-18381450 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 135, 31 |
| Conread position: | 70-274 |
| Cow position: | chr26:32353724-32353520 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 40, 26 |
| Conread position: | 77-226 |
| Cow position: | chr26:9501712-9501855 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 33, 43 |
| Conread position: | 106-226 |
| Cow position: | chr26:26245137-26245019 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 117-214 |
| Cow position: | chr26:27482523-27482425 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 82 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 120-229 |
| Cow position: | chr26:16166649-16166541 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
Show alignments to all cow chromosomes.