Cow genome map

Conread name: Ova1-OVRM10138H04

Conread position: 15-198
Cow position: chr5:48867512-48867331 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 14, 21

Conread position: 19-223
Cow position: chr5:23678749-23678546 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 42, 110

Conread position: 21-182
Cow position: chr5:32696868-32696706 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 40, 131

Conread position: 22-195
Cow position: chr5:40237169-40237341 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 62

Conread position: 22-205
Cow position: chr5:41935697-41935517 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 105

Conread position: 22-214
Cow position: chr5:4032036-4031836 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 42, 38

Conread position: 22-229
Cow position: chr5:11769225-11769433 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 48, 100

Conread position: 22-255
Cow position: chr5:41165042-41165278 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 39, 197

Conread position: 22-278
Cow position: chr5:45420178-45419922 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 191
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 162, 40

Conread position: 24-168
Cow position: chr5:31918603-31918745 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 24-195
Cow position: chr5:1461045-1461219 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 75

Conread position: 24-200
Cow position: chr5:52000180-52000353 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 99

Conread position: 24-201
Cow position: chr5:62142632-62142812 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 24-203
Cow position: chr5:55796007-55795828 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 109, 25

Conread position: 24-204
Cow position: chr5:4280406-4280587 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 86, 32

Conread position: 24-204
Cow position: chr5:18289088-18289261 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 37, 81

Conread position: 24-204
Cow position: chr5:37646588-37646405 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 140

Conread position: 24-204
Cow position: chr5:50575743-50575922 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 137, 0

Conread position: 24-204
Cow position: chr5:54086501-54086677 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 24-204
Cow position: chr5:54767951-54767770 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 29, 70

Conread position: 24-204
Cow position: chr5:55955865-55956051 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 41, 99

Conread position: 24-204
Cow position: chr5:56680207-56680395 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 24-204
Cow position: chr5:67212314-67212499 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 30, 165

Conread position: 24-204
Cow position: chr5:69731461-69731639 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 36, 72

Conread position: 24-205
Cow position: chr5:2851546-2851730 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 66, 98

Conread position: 24-206
Cow position: chr5:18898934-18899114 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 47, 110

Conread position: 24-206
Cow position: chr5:26262718-26262538 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 39, 100

Conread position: 24-206
Cow position: chr5:56153572-56153756 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 95

Conread position: 24-210
Cow position: chr5:72564720-72564910 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 24-212
Cow position: chr5:22643267-22643084 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 23, 37

Conread position: 24-214
Cow position: chr5:21040015-21039833 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 176, 15

Conread position: 24-214
Cow position: chr5:52165220-52165029 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 43, 124

Conread position: 24-214
Cow position: chr5:54350405-54350211 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 36, 0

Conread position: 24-217
Cow position: chr5:4710189-4709999 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 184, 33

Conread position: 24-218
Cow position: chr5:30805126-30805318 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 182, 15

Conread position: 24-218
Cow position: chr5:36855163-36855358 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 177

Conread position: 24-218
Cow position: chr5:59115345-59115533 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 72, 0

Conread position: 24-223
Cow position: chr5:458449-458647 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 159
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 182, 43

Conread position: 24-223
Cow position: chr5:49685312-49685122 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 127, 0

Conread position: 24-226
Cow position: chr5:66972386-66972589 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 41, 179

Conread position: 24-229
Cow position: chr5:35247154-35246947 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 36, 16

Conread position: 24-229
Cow position: chr5:44796773-44796574 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 45, 16

Conread position: 24-236
Cow position: chr5:50101420-50101202 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 37, 0

Conread position: 24-261
Cow position: chr5:51935150-51935385 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 184, 36

Conread position: 24-271
Cow position: chr5:29353176-29352922 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 36, 171

Conread position: 25-216
Cow position: chr5:64321713-64321898 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 72

Conread position: 27-181
Cow position: chr5:31481107-31481264 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 27-189
Cow position: chr5:24349069-24349231 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 27-203
Cow position: chr5:4220945-4221116 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 27-203
Cow position: chr5:47317010-47316835 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 173, 28

Conread position: 27-204
Cow position: chr5:17999531-17999357 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 33, 98

Conread position: 27-204
Cow position: chr5:35459335-35459154 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 27-204
Cow position: chr5:43604104-43604276 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 27-213
Cow position: chr5:13717606-13717424 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 69, 0

Conread position: 27-214
Cow position: chr5:35208225-35208411 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 67

Conread position: 27-214
Cow position: chr5:57419830-57419644 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 179, 8

Conread position: 27-217
Cow position: chr5:20843439-20843243 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 175

Conread position: 27-222
Cow position: chr5:45273539-45273345 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 192, 155

Conread position: 27-222
Cow position: chr5:54311296-54311494 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 154
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 34, 0

Conread position: 27-225
Cow position: chr5:53710729-53710528 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 34, 25

Conread position: 27-226
Cow position: chr5:20128015-20128214 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 172, 36

Conread position: 27-226
Cow position: chr5:26097256-26097450 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 27-228
Cow position: chr5:27188086-27188277 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 39, 65

Conread position: 27-229
Cow position: chr5:7057439-7057236 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 181, 116

Conread position: 27-229
Cow position: chr5:14904111-14903904 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 20, 0

Conread position: 27-229
Cow position: chr5:52001660-52001460 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 27-235
Cow position: chr5:57994906-57994709 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 28-195
Cow position: chr5:6444189-6444025 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 28-203
Cow position: chr5:42845635-42845453 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 32, 0

Conread position: 28-204
Cow position: chr5:47323427-47323601 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 146
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 33, 0

Conread position: 28-204
Cow position: chr5:49501863-49501685 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 34, 0

Conread position: 28-204
Cow position: chr5:63987487-63987307 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 143
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 34, 111

Conread position: 28-205
Cow position: chr5:28224416-28224592 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 28

Conread position: 28-214
Cow position: chr5:42064165-42064355 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 150
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 33, 0

Conread position: 28-218
Cow position: chr5:34528517-34528701 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 149, 11

Conread position: 28-226
Cow position: chr5:58856066-58856268 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 180, 110

Conread position: 29-204
Cow position: chr5:43992285-43992463 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 21, 0

Conread position: 29-214
Cow position: chr5:33560770-33560584 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 36, 27

Conread position: 29-229
Cow position: chr5:11668221-11668024 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 40, 27

Conread position: 29-229
Cow position: chr5:30629197-30628992 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 8, 163

Conread position: 29-272
Cow position: chr5:59873128-59872871 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 30-205
Cow position: chr5:7723629-7723805 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 30-208
Cow position: chr5:60188953-60189139 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 30-237
Cow position: chr5:55019256-55019466 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 0

Conread position: 33-218
Cow position: chr5:9369300-9369117 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 172, 29

Conread position: 34-226
Cow position: chr5:9090053-9089868 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 34-226
Cow position: chr5:52108299-52108108 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 135, 0

Conread position: 35-194
Cow position: chr5:453528-453686 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 35-196
Cow position: chr5:45574399-45574234 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 13, 160

Conread position: 35-202
Cow position: chr5:53946865-53947034 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 35-204
Cow position: chr5:3588995-3589166 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 60

Conread position: 35-204
Cow position: chr5:64140502-64140677 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 35-218
Cow position: chr5:20995126-20994932 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 35-218
Cow position: chr5:53855667-53855860 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 35-220
Cow position: chr5:58446775-58446962 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 0

Conread position: 35-226
Cow position: chr5:30247551-30247367 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 35-226
Cow position: chr5:41981339-41981530 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 34, 90

Conread position: 36-223
Cow position: chr5:60210174-60209990 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 26, 161

Conread position: 36-226
Cow position: chr5:30949947-30949751 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 25, 69

Conread position: 37-202
Cow position: chr5:2309586-2309421 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 23, 149

Conread position: 37-214
Cow position: chr5:39258483-39258654 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 25, 0

Conread position: 38-205
Cow position: chr5:59627002-59626832 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 153

Conread position: 39-182
Cow position: chr5:46672178-46672322 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 39-204
Cow position: chr5:63240949-63241116 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 117
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 39-206
Cow position: chr5:38717288-38717450 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 39-206
Cow position: chr5:46322825-46322662 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 33, 53

Conread position: 39-218
Cow position: chr5:57230367-57230185 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 39-226
Cow position: chr5:26477048-26476856 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 22, 63

Conread position: 41-213
Cow position: chr5:27102822-27102646 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 123
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 43-229
Cow position: chr5:50723025-50723209 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 44-226
Cow position: chr5:34347751-34347573 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 58

Conread position: 44-248
Cow position: chr5:12761140-12760938 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 18, 126

Conread position: 46-229
Cow position: chr5:28230143-28230329 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 48-195
Cow position: chr5:30561915-30562062 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 48-226
Cow position: chr5:43844684-43844503 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 13, 151

Conread position: 48-231
Cow position: chr5:16939610-16939429 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 49-217
Cow position: chr5:25597820-25597984 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 57-222
Cow position: chr5:29771518-29771686 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 58-218
Cow position: chr5:39447542-39447376 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 48, 38

Conread position: 58-225
Cow position: chr5:35513207-35513374 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 11, 144

Conread position: 60-226
Cow position: chr5:6033431-6033597 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 14, 59

Conread position: 62-220
Cow position: chr5:5760316-5760162 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 62-229
Cow position: chr5:15364266-15364432 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 63-201
Cow position: chr5:6528681-6528821 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 104, 0

Conread position: 63-204
Cow position: chr5:4226345-4226485 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 11, 17

Conread position: 63-204
Cow position: chr5:27293886-27293745 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 63-208
Cow position: chr5:65679972-65679830 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 63-217
Cow position: chr5:67634519-67634361 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 116, 0

Conread position: 63-223
Cow position: chr5:58519418-58519255 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 142, 0

Conread position: 63-229
Cow position: chr5:2469209-2469049 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 63-229
Cow position: chr5:39937114-39937278 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 63-229
Cow position: chr5:54750813-54750969 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 63-229
Cow position: chr5:55965896-55965731 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 137, 0

Conread position: 63-269
Cow position: chr5:55129341-55129549 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 143, 0

Conread position: 64-204
Cow position: chr5:65552709-65552578 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 64-217
Cow position: chr5:24946239-24946393 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 132

Conread position: 64-218
Cow position: chr5:52852970-52853125 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 138, 0

Conread position: 64-229
Cow position: chr5:11289394-11289227 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 146

Conread position: 64-229
Cow position: chr5:36868736-36868898 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 96, 0

Conread position: 65-166
Cow position: chr5:14742214-14742315 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 65-216
Cow position: chr5:5257289-5257133 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 65-231
Cow position: chr5:44163369-44163200 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 50, 166

Conread position: 66-195
Cow position: chr5:48918811-48918938 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 66-218
Cow position: chr5:44810238-44810085 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 10, 20

Conread position: 67-204
Cow position: chr5:11562721-11562583 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 67-218
Cow position: chr5:59627102-59627254 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 139, 0

Conread position: 67-225
Cow position: chr5:12299913-12300066 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 128, 0

Conread position: 69-204
Cow position: chr5:43858415-43858281 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 72-204
Cow position: chr5:60948140-60948271 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 67, 60

Conread position: 73-220
Cow position: chr5:20211970-20212119 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 127, 49

Conread position: 74-223
Cow position: chr5:44196920-44196771 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 86-204
Cow position: chr5:51233998-51233880 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 92-204
Cow position: chr5:16185405-16185517 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 92-218
Cow position: chr5:22102585-22102711 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 110, 119

Conread position: 101-218
Cow position: chr5:44901545-44901664 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 101-229
Cow position: chr5:43839964-43839836 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 101

Conread position: 107-202
Cow position: chr5:62011725-62011820 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 107-204
Cow position: chr5:20882582-20882485 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 107-205
Cow position: chr5:51490560-51490462 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 81
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 107-226
Cow position: chr5:56433923-56434043 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 107-229
Cow position: chr5:20812588-20812710 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 112, 52

Conread position: 107-229
Cow position: chr5:24915485-24915364 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 107-229
Cow position: chr5:49821470-49821592 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 107-229
Cow position: chr5:53980712-53980591 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 107-236
Cow position: chr5:16668739-16668869 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 101, 0

Conread position: 108-211
Cow position: chr5:22387016-22386913 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 108-236
Cow position: chr5:29979915-29979788 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 99, 0

Conread position: 114-204
Cow position: chr5:4336341-4336431 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 77
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.