Cow genome map
| Conread name: | Ova1-OVRM10138H04 |
| Conread position: | 14-201 |
| Cow position: | chr6:38771248-38771430 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 92, 88 |
| Conread position: | 16-204 |
| Cow position: | chr6:19131394-19131583 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 49, 8 |
| Conread position: | 17-199 |
| Cow position: | chr6:14958380-14958192 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 20-213 |
| Cow position: | chr6:67451405-67451208 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 21-195 |
| Cow position: | chr6:47885053-47884886 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 22-203 |
| Cow position: | chr6:35435962-35436146 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 22-204 |
| Cow position: | chr6:10612823-10612994 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 77 |
| Conread position: | 22-222 |
| Cow position: | chr6:53841533-53841334 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 184, 41 |
| Conread position: | 22-225 |
| Cow position: | chr6:37199560-37199363 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 42, 103 |
| Conread position: | 22-226 |
| Cow position: | chr6:35181290-35181081 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 40, 66 |
| Conread position: | 23-205 |
| Cow position: | chr6:47355789-47355975 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 10, 79 |
| Conread position: | 24-176 |
| Cow position: | chr6:12542961-12542805 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 24-190 |
| Cow position: | chr6:68652381-68652211 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 24-195 |
| Cow position: | chr6:7119648-7119475 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 35, 168 |
| Conread position: | 24-196 |
| Cow position: | chr6:4864576-4864402 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 24-200 |
| Cow position: | chr6:6060595-6060423 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 24-201 |
| Cow position: | chr6:20196326-20196153 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 7, 43 |
| Conread position: | 24-201 |
| Cow position: | chr6:34196178-34195999 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 24-203 |
| Cow position: | chr6:66874322-66874501 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 36, 76 |
| Conread position: | 24-203 |
| Cow position: | chr6:67281869-67282046 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 24-204 |
| Cow position: | chr6:16191646-16191824 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 37, 121 |
| Conread position: | 24-204 |
| Cow position: | chr6:42565661-42565840 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 24-204 |
| Cow position: | chr6:67456694-67456871 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 24-205 |
| Cow position: | chr6:45065044-45064863 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 34, 40 |
| Conread position: | 24-206 |
| Cow position: | chr6:31564367-31564183 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 42, 82 |
| Conread position: | 24-206 |
| Cow position: | chr6:41656072-41655887 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 24-210 |
| Cow position: | chr6:23532625-23532814 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 17, 108 |
| Conread position: | 24-211 |
| Cow position: | chr6:9008639-9008452 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-213 |
| Cow position: | chr6:33509762-33509947 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 50, 26 |
| Conread position: | 24-214 |
| Cow position: | chr6:38441148-38441336 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 182, 72 |
| Conread position: | 24-217 |
| Cow position: | chr6:9751081-9750889 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 46, 20 |
| Conread position: | 24-218 |
| Cow position: | chr6:2623754-2623940 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 24-221 |
| Cow position: | chr6:528308-528114 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 24-223 |
| Cow position: | chr6:17549009-17548802 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 24-223 |
| Cow position: | chr6:24781582-24781389 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 24-224 |
| Cow position: | chr6:18049052-18048852 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 35, 155 |
| Conread position: | 24-226 |
| Cow position: | chr6:15447231-15447020 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 24-226 |
| Cow position: | chr6:36284214-36284415 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 53, 156 |
| Conread position: | 24-226 |
| Cow position: | chr6:55535777-55535576 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 38, 100 |
| Conread position: | 24-229 |
| Cow position: | chr6:11246735-11246942 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 36, 84 |
| Conread position: | 24-230 |
| Cow position: | chr6:60739988-60740190 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 24-271 |
| Cow position: | chr6:19013039-19013283 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 14, 114 |
| Conread position: | 24-274 |
| Cow position: | chr6:59603239-59602990 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 35, 177 |
| Conread position: | 24-280 |
| Cow position: | chr6:6343402-6343663 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 116, 15 |
| Conread position: | 25-196 |
| Cow position: | chr6:17527389-17527220 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 27-185 |
| Cow position: | chr6:54140771-54140934 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 27-193 |
| Cow position: | chr6:59718771-59718938 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 101 |
| Conread position: | 27-201 |
| Cow position: | chr6:8788062-8787887 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 34, 15 |
| Conread position: | 27-201 |
| Cow position: | chr6:51893524-51893351 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 27-203 |
| Cow position: | chr6:15937876-15937703 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 27-203 |
| Cow position: | chr6:35103358-35103176 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 27-204 |
| Cow position: | chr6:2153623-2153446 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 25, 37 |
| Conread position: | 27-204 |
| Cow position: | chr6:8125300-8125479 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 27-204 |
| Cow position: | chr6:18608840-18608660 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 60, 154 |
| Conread position: | 27-204 |
| Cow position: | chr6:28482995-28483169 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 19, 33 |
| Conread position: | 27-204 |
| Cow position: | chr6:37395433-37395247 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 27-204 |
| Cow position: | chr6:53932872-53932695 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 88, 34 |
| Conread position: | 27-204 |
| Cow position: | chr6:55417551-55417375 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 68, 5 |
| Conread position: | 27-204 |
| Cow position: | chr6:59069651-59069467 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 27-205 |
| Cow position: | chr6:11169673-11169856 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 27, 95 |
| Conread position: | 27-205 |
| Cow position: | chr6:24004516-24004690 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 27-205 |
| Cow position: | chr6:46865614-46865438 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 27-205 |
| Cow position: | chr6:55502741-55502920 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 31, 5 |
| Conread position: | 27-205 |
| Cow position: | chr6:62669843-62670019 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 27-206 |
| Cow position: | chr6:37462993-37463177 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 27-209 |
| Cow position: | chr6:12845360-12845538 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 35 |
| Conread position: | 27-215 |
| Cow position: | chr6:60667395-60667574 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 27-217 |
| Cow position: | chr6:41015002-41014812 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 128, 29 |
| Conread position: | 27-218 |
| Cow position: | chr6:64431911-64432106 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 34, 5 |
| Conread position: | 27-225 |
| Cow position: | chr6:47305313-47305512 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 33, 128 |
| Conread position: | 27-228 |
| Cow position: | chr6:60057679-60057485 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 27-229 |
| Cow position: | chr6:3592374-3592574 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 34, 78 |
| Conread position: | 27-229 |
| Cow position: | chr6:12964827-12965031 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 40, 176 |
| Conread position: | 27-229 |
| Cow position: | chr6:15242807-15243013 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 34, 179 |
| Conread position: | 27-229 |
| Cow position: | chr6:38609944-38610148 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 32 |
| Conread position: | 27-229 |
| Cow position: | chr6:43134963-43134761 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 179, 196 |
| Conread position: | 27-231 |
| Cow position: | chr6:17313709-17313914 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 39, 13 |
| Conread position: | 27-231 |
| Cow position: | chr6:44867565-44867367 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 27-239 |
| Cow position: | chr6:22525307-22525518 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 179, 34 |
| Conread position: | 27-267 |
| Cow position: | chr6:582297-582056 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 34, 104 |
| Conread position: | 27-274 |
| Cow position: | chr6:60118125-60118367 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 36, 19 |
| Conread position: | 28-209 |
| Cow position: | chr6:51530209-51530028 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 78, 29 |
| Conread position: | 28-214 |
| Cow position: | chr6:10176320-10176138 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 178, 32 |
| Conread position: | 28-218 |
| Cow position: | chr6:37149164-37149357 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 28-220 |
| Cow position: | chr6:2584917-2585112 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 28-229 |
| Cow position: | chr6:19695786-19695983 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 124, 90 |
| Conread position: | 28-229 |
| Cow position: | chr6:57089172-57089378 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 34, 190 |
| Conread position: | 28-232 |
| Cow position: | chr6:24110256-24110461 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 33, 95 |
| Conread position: | 29-204 |
| Cow position: | chr6:4692002-4691823 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 33, 145 |
| Conread position: | 29-204 |
| Cow position: | chr6:58370731-58370903 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 38, 112 |
| Conread position: | 29-205 |
| Cow position: | chr6:14949503-14949327 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 114, 95 |
| Conread position: | 29-206 |
| Cow position: | chr6:20605931-20606114 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 35, 168 |
| Conread position: | 29-217 |
| Cow position: | chr6:46558031-46558222 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 29-220 |
| Cow position: | chr6:65264561-65264376 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 171, 32 |
| Conread position: | 29-229 |
| Cow position: | chr6:5330387-5330588 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 31, 159 |
| Conread position: | 30-203 |
| Cow position: | chr6:38218646-38218819 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 7, 92 |
| Conread position: | 30-206 |
| Cow position: | chr6:47574883-47575061 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 30-212 |
| Cow position: | chr6:28977067-28976879 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 7, 166 |
| Conread position: | 32-163 |
| Cow position: | chr6:33346898-33347029 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 32-226 |
| Cow position: | chr6:19996597-19996788 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 34, 24 |
| Conread position: | 32-229 |
| Cow position: | chr6:21514630-21514431 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 27, 20 |
| Conread position: | 35-203 |
| Cow position: | chr6:15300843-15300683 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 35-204 |
| Cow position: | chr6:445304-445476 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 35-204 |
| Cow position: | chr6:16352364-16352201 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 27, 42 |
| Conread position: | 35-204 |
| Cow position: | chr6:19681545-19681372 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 35-204 |
| Cow position: | chr6:40032172-40032343 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 25, 80 |
| Conread position: | 35-206 |
| Cow position: | chr6:7539559-7539727 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 35-206 |
| Cow position: | chr6:59301805-59301633 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 67, 28 |
| Conread position: | 35-217 |
| Cow position: | chr6:6067712-6067536 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 148, 24 |
| Conread position: | 35-217 |
| Cow position: | chr6:12092010-12091827 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 35-220 |
| Cow position: | chr6:23402007-23401824 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 35-229 |
| Cow position: | chr6:44623590-44623789 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 35-231 |
| Cow position: | chr6:10039705-10039902 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 32, 168 |
| Conread position: | 36-223 |
| Cow position: | chr6:7801410-7801223 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 30, 25 |
| Conread position: | 37-205 |
| Cow position: | chr6:1429626-1429793 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 37-205 |
| Cow position: | chr6:21590690-21590861 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 37-218 |
| Cow position: | chr6:20219794-20219608 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 24, 101 |
| Conread position: | 38-226 |
| Cow position: | chr6:16764669-16764470 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 67, 29 |
| Conread position: | 39-195 |
| Cow position: | chr6:27888337-27888495 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 39-229 |
| Cow position: | chr6:32453373-32453561 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 43-203 |
| Cow position: | chr6:21535029-21535191 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 27, 17 |
| Conread position: | 45-223 |
| Cow position: | chr6:10224194-10224364 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 161, 77 |
| Conread position: | 46-202 |
| Cow position: | chr6:37783395-37783551 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 47-209 |
| Cow position: | chr6:36011901-36012060 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 49-204 |
| Cow position: | chr6:68628893-68628739 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 49-210 |
| Cow position: | chr6:10488270-10488113 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 52-226 |
| Cow position: | chr6:1002262-1002087 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 55-224 |
| Cow position: | chr6:314841-315006 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 56-206 |
| Cow position: | chr6:26450319-26450468 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 128, 69 |
| Conread position: | 56-229 |
| Cow position: | chr6:23610946-23611117 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 12, 104 |
| Conread position: | 61-219 |
| Cow position: | chr6:67214758-67214918 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 63-204 |
| Cow position: | chr6:24536520-24536378 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 63-204 |
| Cow position: | chr6:67806003-67805862 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 63-206 |
| Cow position: | chr6:61681089-61681232 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 63-226 |
| Cow position: | chr6:49096439-49096280 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 63-226 |
| Cow position: | chr6:57079435-57079599 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 63-229 |
| Cow position: | chr6:55548522-55548359 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 63-229 |
| Cow position: | chr6:66433961-66434128 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 12, 70 |
| Conread position: | 64-204 |
| Cow position: | chr6:63047605-63047745 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 64-220 |
| Cow position: | chr6:67323322-67323479 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 65-204 |
| Cow position: | chr6:48379600-48379461 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 65-214 |
| Cow position: | chr6:31865112-31865256 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 139, 35 |
| Conread position: | 65-217 |
| Cow position: | chr6:54127799-54127649 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 143, 91 |
| Conread position: | 65-218 |
| Cow position: | chr6:8688833-8688679 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 66-203 |
| Cow position: | chr6:40774317-40774180 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 118, 124 |
| Conread position: | 67-205 |
| Cow position: | chr6:54573275-54573413 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 70-259 |
| Cow position: | chr6:19045641-19045831 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 133, 177 |
| Conread position: | 71-204 |
| Cow position: | chr6:62078943-62079075 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 80-204 |
| Cow position: | chr6:46841497-46841373 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 84-229 |
| Cow position: | chr6:22876898-22876754 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 86-204 |
| Cow position: | chr6:8468700-8468818 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 88-214 |
| Cow position: | chr6:29853028-29852902 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 92-214 |
| Cow position: | chr6:15058417-15058540 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 100-239 |
| Cow position: | chr6:35702296-35702155 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 105-239 |
| Cow position: | chr6:26054851-26054715 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 105-285 |
| Cow position: | chr6:34380761-34380582 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 100, 52 |
| Conread position: | 106-217 |
| Cow position: | chr6:58697577-58697467 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 107-204 |
| Cow position: | chr6:35654494-35654397 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 107-230 |
| Cow position: | chr6:37603620-37603745 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 108-204 |
| Cow position: | chr6:18440421-18440325 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 82 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 108-214 |
| Cow position: | chr6:58076450-58076557 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 109-231 |
| Cow position: | chr6:45160000-45159879 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
Show alignments to all cow chromosomes.