Cow genome map
| Conread name: | Ova1-OVRM10147F05 |
| Conread position: | 1-103 |
| Cow position: | chr12:6666645-6666547 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-107 |
| Cow position: | chr12:18938943-18938837 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 85 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-107 |
| Cow position: | chr12:45782301-45782195 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 85 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-109 |
| Cow position: | chr12:24397089-24397196 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-109 |
| Cow position: | chr12:44559925-44559817 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 86 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-113 |
| Cow position: | chr12:43619356-43619243 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 38, 97 |
| Conread position: | 1-117 |
| Cow position: | chr12:42143234-42143119 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-119 |
| Cow position: | chr12:11109829-11109711 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-120 |
| Cow position: | chr12:2661339-2661458 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 84 |
| Conread position: | 1-120 |
| Cow position: | chr12:3586193-3586074 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-122 |
| Cow position: | chr12:5543721-5543839 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 1-122 |
| Cow position: | chr12:25441716-25441594 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 101, 35 |
| Conread position: | 1-123 |
| Cow position: | chr12:22859538-22859420 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 1-123 |
| Cow position: | chr12:26147095-26147217 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-123 |
| Cow position: | chr12:26868739-26868860 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 1-123 |
| Cow position: | chr12:43854968-43854847 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-125 |
| Cow position: | chr12:43474835-43474711 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-128 |
| Cow position: | chr12:36790737-36790864 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-130 |
| Cow position: | chr12:45001993-45002121 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-131 |
| Cow position: | chr12:9439377-9439506 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-131 |
| Cow position: | chr12:45092521-45092391 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-133 |
| Cow position: | chr12:5680758-5680626 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-133 |
| Cow position: | chr12:13911498-13911638 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-133 |
| Cow position: | chr12:18765898-18766030 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-133 |
| Cow position: | chr12:42181054-42181186 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-134 |
| Cow position: | chr12:1701730-1701863 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-134 |
| Cow position: | chr12:6410659-6410793 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-134 |
| Cow position: | chr12:7110272-7110139 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-134 |
| Cow position: | chr12:15163214-15163082 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 1-134 |
| Cow position: | chr12:21922525-21922393 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 1-134 |
| Cow position: | chr12:23764559-23764436 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 1-134 |
| Cow position: | chr12:28256981-28257114 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-134 |
| Cow position: | chr12:29779839-29779972 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-134 |
| Cow position: | chr12:33976274-33976141 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-134 |
| Cow position: | chr12:34161488-34161356 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 1-134 |
| Cow position: | chr12:35241031-35241163 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-134 |
| Cow position: | chr12:42282761-42282897 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 1-134 |
| Cow position: | chr12:43782896-43783033 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1-134 |
| Cow position: | chr12:45680352-45680219 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-136 |
| Cow position: | chr12:25814228-25814087 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 1-136 |
| Cow position: | chr12:44542341-44542204 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 1-137 |
| Cow position: | chr12:12532417-12532552 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-139 |
| Cow position: | chr12:17774869-17774731 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-140 |
| Cow position: | chr12:7311456-7311317 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 55, 132 |
| Conread position: | 1-140 |
| Cow position: | chr12:9229425-9229564 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-141 |
| Cow position: | chr12:10834058-10834189 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-141 |
| Cow position: | chr12:11587849-11587709 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-141 |
| Cow position: | chr12:47267234-47267374 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-142 |
| Cow position: | chr12:3616072-3615936 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-142 |
| Cow position: | chr12:6210083-6210224 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-142 |
| Cow position: | chr12:6241394-6241253 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 57, 51 |
| Conread position: | 1-142 |
| Cow position: | chr12:16056783-16056924 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-142 |
| Cow position: | chr12:21780237-21780096 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-142 |
| Cow position: | chr12:29057465-29057321 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 1-142 |
| Cow position: | chr12:34195635-34195772 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-142 |
| Cow position: | chr12:42286045-42285903 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 1-142 |
| Cow position: | chr12:47804231-47804091 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-143 |
| Cow position: | chr12:3879905-3880048 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 1-143 |
| Cow position: | chr12:4720022-4719880 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-143 |
| Cow position: | chr12:4793272-4793130 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-143 |
| Cow position: | chr12:4866892-4866750 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-143 |
| Cow position: | chr12:6754271-6754129 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-143 |
| Cow position: | chr12:7920317-7920175 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-143 |
| Cow position: | chr12:9914864-9914722 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-143 |
| Cow position: | chr12:10895478-10895620 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-143 |
| Cow position: | chr12:26217749-26217892 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 1-143 |
| Cow position: | chr12:26749877-26750021 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 1-143 |
| Cow position: | chr12:30805933-30805787 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 56, 139 |
| Conread position: | 1-143 |
| Cow position: | chr12:41159662-41159522 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 135, 78 |
| Conread position: | 1-144 |
| Cow position: | chr12:1773586-1773733 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-144 |
| Cow position: | chr12:3599685-3599827 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 16, 27 |
| Conread position: | 1-144 |
| Cow position: | chr12:5635378-5635521 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-144 |
| Cow position: | chr12:6687966-6687825 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-144 |
| Cow position: | chr12:7978112-7977972 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-144 |
| Cow position: | chr12:9514436-9514293 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-144 |
| Cow position: | chr12:15495974-15495830 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 1-144 |
| Cow position: | chr12:17671505-17671366 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 126, 74 |
| Conread position: | 1-144 |
| Cow position: | chr12:23574838-23574695 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-144 |
| Cow position: | chr12:29966177-29966039 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-144 |
| Cow position: | chr12:30590842-30590696 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 1-144 |
| Cow position: | chr12:31269229-31269086 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-144 |
| Cow position: | chr12:36500872-36501016 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-144 |
| Cow position: | chr12:37993657-37993801 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 1-144 |
| Cow position: | chr12:41474164-41474022 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 1-144 |
| Cow position: | chr12:44733017-44733160 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-145 |
| Cow position: | chr12:14223056-14222913 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 139, 121 |
| Conread position: | 1-145 |
| Cow position: | chr12:27037375-27037519 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-145 |
| Cow position: | chr12:30210558-30210414 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 139, 134 |
| Conread position: | 1-145 |
| Cow position: | chr12:31517096-31517238 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 1-145 |
| Cow position: | chr12:33851432-33851292 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-145 |
| Cow position: | chr12:38126449-38126594 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 1-145 |
| Cow position: | chr12:39663125-39663269 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-145 |
| Cow position: | chr12:48415441-48415581 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-146 |
| Cow position: | chr12:32753588-32753443 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-146 |
| Cow position: | chr12:40157950-40158092 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-146 |
| Cow position: | chr12:40200772-40200631 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-147 |
| Cow position: | chr12:25280427-25280573 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 139, 134 |
| Conread position: | 1-152 |
| Cow position: | chr12:10942362-10942212 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 1-153 |
| Cow position: | chr12:15700155-15700002 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 63, 47 |
| Conread position: | 1-153 |
| Cow position: | chr12:27563302-27563454 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 56, 51 |
| Conread position: | 1-156 |
| Cow position: | chr12:3197343-3197189 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 1-156 |
| Cow position: | chr12:36994041-36994195 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 1-159 |
| Cow position: | chr12:23916917-23916762 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 146, 85 |
| Conread position: | 1-165 |
| Cow position: | chr12:31532329-31532492 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 141, 76 |
| Conread position: | 1-167 |
| Cow position: | chr12:15173898-15173733 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 1-168 |
| Cow position: | chr12:37008632-37008796 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 152, 77 |
| Conread position: | 1-169 |
| Cow position: | chr12:18943583-18943751 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-169 |
| Cow position: | chr12:35368717-35368548 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 1-169 |
| Cow position: | chr12:42967069-42966906 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 143, 11 |
| Conread position: | 1-175 |
| Cow position: | chr12:11836309-11836136 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 161, 0 |
| Conread position: | 1-175 |
| Cow position: | chr12:29675067-29675238 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 152, 116 |
| Conread position: | 2-111 |
| Cow position: | chr12:22752699-22752590 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-111 |
| Cow position: | chr12:25596709-25596603 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 2-118 |
| Cow position: | chr12:6226073-6226186 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 2-134 |
| Cow position: | chr12:7457471-7457601 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 2-134 |
| Cow position: | chr12:29483812-29483944 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-134 |
| Cow position: | chr12:30753793-30753662 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 2-134 |
| Cow position: | chr12:43354053-43354181 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 2-141 |
| Cow position: | chr12:42254741-42254603 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 2-142 |
| Cow position: | chr12:24023728-24023869 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 2-143 |
| Cow position: | chr12:4135151-4135010 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-143 |
| Cow position: | chr12:29969653-29969511 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 2-143 |
| Cow position: | chr12:35770947-35771088 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-144 |
| Cow position: | chr12:3623768-3623626 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-144 |
| Cow position: | chr12:4768999-4768858 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 2-145 |
| Cow position: | chr12:3950271-3950414 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-145 |
| Cow position: | chr12:18103538-18103677 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 2-145 |
| Cow position: | chr12:24211481-24211344 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 2-145 |
| Cow position: | chr12:45167946-45168088 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 2-147 |
| Cow position: | chr12:3675455-3675598 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 2-147 |
| Cow position: | chr12:42759985-42760128 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 135, 96 |
| Conread position: | 2-150 |
| Cow position: | chr12:4821035-4820880 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 2-152 |
| Cow position: | chr12:7960510-7960657 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 101, 39 |
| Conread position: | 2-165 |
| Cow position: | chr12:4797374-4797215 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 3-122 |
| Cow position: | chr12:23106010-23105891 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-134 |
| Cow position: | chr12:44595737-44595868 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-145 |
| Cow position: | chr12:10827858-10827713 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 3-184 |
| Cow position: | chr12:42234132-42233948 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 92, 18 |
| Conread position: | 4-96 |
| Cow position: | chr12:3057159-3057067 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 78 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-142 |
| Cow position: | chr12:23855904-23855773 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 4-147 |
| Cow position: | chr12:6188042-6188185 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-152 |
| Cow position: | chr12:5940413-5940263 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 7-132 |
| Cow position: | chr12:15389140-15389015 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-142 |
| Cow position: | chr12:42174485-42174351 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 10-156 |
| Cow position: | chr12:22540273-22540127 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-141 |
| Cow position: | chr12:29995400-29995527 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 12-144 |
| Cow position: | chr12:18963864-18963995 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 14-133 |
| Cow position: | chr12:43691354-43691473 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-144 |
| Cow position: | chr12:29947867-29947996 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 18-145 |
| Cow position: | chr12:10491330-10491204 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 10, 50 |
| Conread position: | 19-170 |
| Cow position: | chr12:25452389-25452541 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 5, 135 |
| Conread position: | 41-159 |
| Cow position: | chr12:39675462-39675579 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 110, 0 |
Show alignments to all cow chromosomes.