Cow genome map
Conread name: | Ova1-OVRM10152G02 |
Conread position: | 5-417 |
Cow position: | chr1:94253146-94253549 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 146 |
Conread position: | 6-305 |
Cow position: | chr1:55322828-55322540 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 210 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 101, 145 |
Conread position: | 6-711 |
Cow position: | chr1:67286715-67287427 (view UCSC Genome Browser custom track) |
Alignm length: | 728 |
Alignm identity: | 508 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 226 |
Conread position: | 7-147 |
Cow position: | chr1:30027321-30027178 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 109 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 102, 90 |
Conread position: | 7-162 |
Cow position: | chr1:72136870-72137027 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 120 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 100, 69 |
Conread position: | 7-469 |
Cow position: | chr1:24650986-24651425 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 314 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 95, 142 |
Conread position: | 9-138 |
Cow position: | chr1:89479538-89479669 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 106 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 95, 15 |
Conread position: | 9-153 |
Cow position: | chr1:34689572-34689720 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 112 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 9-615 |
Cow position: | chr1:21720121-21720713 (view UCSC Genome Browser custom track) |
Alignm length: | 619 |
Alignm identity: | 440 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 116 |
Conread position: | 9-704 |
Cow position: | chr1:40513146-40512447 (view UCSC Genome Browser custom track) |
Alignm length: | 717 |
Alignm identity: | 511 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 14 |
Conread position: | 158-696 |
Cow position: | chr1:88270169-88269626 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 359 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 58, 19 |
Conread position: | 185-439 |
Cow position: | chr1:34690086-34690339 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 176 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 61, 202 |
Conread position: | 187-432 |
Cow position: | chr1:84150075-84150318 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 162 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 149, 29 |
Conread position: | 187-437 |
Cow position: | chr1:31418469-31418215 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 176 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 34, 113 |
Conread position: | 187-562 |
Cow position: | chr1:77656169-77656537 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 244 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 23, 16 |
Conread position: | 187-605 |
Cow position: | chr1:44101297-44100870 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 275 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 17, 47 |
Conread position: | 187-657 |
Cow position: | chr1:63501922-63502404 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 63 |
Conread position: | 187-703 |
Cow position: | chr1:31330309-31329796 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 350 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 94, 26 |
Conread position: | 187-715 |
Cow position: | chr1:29033186-29033724 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 84 |
Conread position: | 187-715 |
Cow position: | chr1:33389190-33389738 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 83 |
Conread position: | 230-715 |
Cow position: | chr1:15026467-15026963 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 35 |
Conread position: | 242-606 |
Cow position: | chr1:5319279-5319636 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 246 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 49, 45 |
Conread position: | 252-710 |
Cow position: | chr1:79456814-79456369 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 381, 45 |
Conread position: | 287-715 |
Cow position: | chr1:67328095-67327663 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 287 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 56, 5 |
Conread position: | 290-509 |
Cow position: | chr1:29413971-29413747 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 165 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 307-649 |
Cow position: | chr1:78361338-78361681 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 225 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 36, 125 |
Conread position: | 312-715 |
Cow position: | chr1:98659687-98659278 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 97 |
Conread position: | 313-512 |
Cow position: | chr1:58179502-58179300 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 151 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 120, 59 |
Conread position: | 313-563 |
Cow position: | chr1:38387150-38386900 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 188 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 29, 42 |
Conread position: | 313-676 |
Cow position: | chr1:22344128-22344479 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 72 |
Conread position: | 319-639 |
Cow position: | chr1:57662197-57662516 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 223 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 25, 122 |
Conread position: | 320-567 |
Cow position: | chr1:86610042-86610289 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 171 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 25, 32 |
Conread position: | 325-715 |
Cow position: | chr1:22842849-22843247 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 264 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 24, 198 |
Conread position: | 326-629 |
Cow position: | chr1:98864524-98864214 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 209 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 17, 49 |
Conread position: | 330-715 |
Cow position: | chr1:55321934-55321538 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 45 |
Conread position: | 361-705 |
Cow position: | chr1:30518935-30519284 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 161 |
Conread position: | 373-575 |
Cow position: | chr1:56193670-56193467 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 150 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 40, 27 |
Conread position: | 373-715 |
Cow position: | chr1:49973929-49973582 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 9 |
Conread position: | 386-676 |
Cow position: | chr1:23052056-23052357 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 214 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 34, 116 |
Conread position: | 390-715 |
Cow position: | chr1:3385736-3385413 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 243, 21 |
Conread position: | 403-584 |
Cow position: | chr1:45019586-45019406 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 132 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 60, 72 |
Conread position: | 411-715 |
Cow position: | chr1:33551227-33551532 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 5 |
Conread position: | 411-715 |
Cow position: | chr1:56144035-56143729 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 5 |
Conread position: | 411-715 |
Cow position: | chr1:58336138-58336444 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 5 |
Conread position: | 411-715 |
Cow position: | chr1:88131074-88131379 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 5 |
Conread position: | 411-715 |
Cow position: | chr1:91892820-91892513 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 5 |
Conread position: | 411-715 |
Cow position: | chr1:99913720-99914026 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 5 |
Conread position: | 416-715 |
Cow position: | chr1:21999650-21999348 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 99 |
Conread position: | 416-715 |
Cow position: | chr1:42736755-42737061 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 102 |
Conread position: | 416-715 |
Cow position: | chr1:48246152-48246440 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 98 |
Conread position: | 416-715 |
Cow position: | chr1:72081086-72081386 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 91 |
Conread position: | 417-711 |
Cow position: | chr1:17036257-17035960 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 100 |
Conread position: | 424-715 |
Cow position: | chr1:76545226-76544933 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 91 |
Conread position: | 437-629 |
Cow position: | chr1:61309334-61309524 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 147 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 442-713 |
Cow position: | chr1:66999352-66999616 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 159 |
Conread position: | 442-715 |
Cow position: | chr1:20829215-20829492 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 8 |
Conread position: | 450-715 |
Cow position: | chr1:82564836-82565106 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 67 |
Conread position: | 457-713 |
Cow position: | chr1:11291763-11291507 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 176, 57 |
Conread position: | 457-713 |
Cow position: | chr1:13450549-13450805 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 176, 57 |
Conread position: | 457-713 |
Cow position: | chr1:21087756-21088014 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 54 |
Conread position: | 457-713 |
Cow position: | chr1:39544112-39544370 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 55 |
Conread position: | 457-713 |
Cow position: | chr1:53198892-53199151 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 24 |
Conread position: | 457-713 |
Cow position: | chr1:71562230-71561972 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 176, 57 |
Conread position: | 457-713 |
Cow position: | chr1:82652996-82653266 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 57 |
Conread position: | 457-715 |
Cow position: | chr1:31397033-31397295 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 176, 57 |
Conread position: | 457-715 |
Cow position: | chr1:40053698-40053957 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 176, 57 |
Conread position: | 457-715 |
Cow position: | chr1:43571059-43570802 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 188 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 176, 55 |
Conread position: | 458-713 |
Cow position: | chr1:40574557-40574814 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 56 |
Conread position: | 458-713 |
Cow position: | chr1:82912800-82912543 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 56 |
Conread position: | 465-656 |
Cow position: | chr1:30283192-30283003 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 146 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 185, 49 |
Conread position: | 465-711 |
Cow position: | chr1:85792037-85792280 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 49 |
Conread position: | 465-713 |
Cow position: | chr1:17012388-17012138 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 47 |
Conread position: | 465-713 |
Cow position: | chr1:86547784-86547538 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 49 |
Conread position: | 465-715 |
Cow position: | chr1:5355477-5355729 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 49 |
Conread position: | 465-715 |
Cow position: | chr1:56490201-56490454 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 49 |
Conread position: | 465-715 |
Cow position: | chr1:60339656-60339905 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 49 |
Conread position: | 465-715 |
Cow position: | chr1:89425924-89426176 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 49 |
Show alignments to all cow chromosomes.