Cow genome map


           Conread name:
           Ova1-OVRM10152G02
        

               Conread position:
               5-417
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 146
               

               Conread position:
               6-305
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               101, 145
               

               Conread position:
               6-711
               

               Cow position:
               
               

               Alignm length:
               728
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 226
               

               Conread position:
               7-147
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               102, 90
               

               Conread position:
               7-162
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               100, 69
               

               Conread position:
               7-469
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               314
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               95, 142
               

               Conread position:
               9-138
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               95, 15
               

               Conread position:
               9-153
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               9-615
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 116
               

               Conread position:
               9-704
               

               Cow position:
               
               

               Alignm length:
               717
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 14
               

               Conread position:
               158-696
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               359
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               58, 19
               

               Conread position:
               185-439
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               61, 202
               

               Conread position:
               187-432
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               149, 29
               

               Conread position:
               187-437
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               34, 113
               

               Conread position:
               187-562
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               23, 16
               

               Conread position:
               187-605
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               275
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               17, 47
               

               Conread position:
               187-657
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 63
               

               Conread position:
               187-703
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               350
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               94, 26
               

               Conread position:
               187-715
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 84
               

               Conread position:
               187-715
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 83
               

               Conread position:
               230-715
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 35
               

               Conread position:
               242-606
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               246
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               49, 45
               

               Conread position:
               252-710
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               381, 45
               

               Conread position:
               287-715
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               287
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               56, 5
               

               Conread position:
               290-509
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               307-649
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               36, 125
               

               Conread position:
               312-715
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 97
               

               Conread position:
               313-512
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               120, 59
               

               Conread position:
               313-563
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               29, 42
               

               Conread position:
               313-676
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 72
               

               Conread position:
               319-639
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               25, 122
               

               Conread position:
               320-567
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               25, 32
               

               Conread position:
               325-715
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               24, 198
               

               Conread position:
               326-629
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               17, 49
               

               Conread position:
               330-715
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 45
               

               Conread position:
               361-705
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 161
               

               Conread position:
               373-575
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               40, 27
               

               Conread position:
               373-715
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 9
               

               Conread position:
               386-676
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               34, 116
               

               Conread position:
               390-715
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 21
               

               Conread position:
               403-584
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               60, 72
               

               Conread position:
               411-715
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 5
               

               Conread position:
               411-715
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 5
               

               Conread position:
               411-715
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 5
               

               Conread position:
               411-715
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 5
               

               Conread position:
               411-715
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 5
               

               Conread position:
               411-715
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 5
               

               Conread position:
               416-715
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 99
               

               Conread position:
               416-715
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 102
               

               Conread position:
               416-715
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 98
               

               Conread position:
               416-715
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 91
               

               Conread position:
               417-711
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 100
               

               Conread position:
               424-715
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 91
               

               Conread position:
               437-629
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               442-713
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 159
               

               Conread position:
               442-715
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 8
               

               Conread position:
               450-715
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 67
               

               Conread position:
               457-713
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 57
               

               Conread position:
               457-713
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 57
               

               Conread position:
               457-713
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 54
               

               Conread position:
               457-713
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 55
               

               Conread position:
               457-713
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 24
               

               Conread position:
               457-713
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 57
               

               Conread position:
               457-713
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 57
               

               Conread position:
               457-715
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 57
               

               Conread position:
               457-715
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 57
               

               Conread position:
               457-715
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               176, 55
               

               Conread position:
               458-713
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 56
               

               Conread position:
               458-713
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 56
               

               Conread position:
               465-656
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               185, 49
               

               Conread position:
               465-711
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 49
               

               Conread position:
               465-713
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 47
               

               Conread position:
               465-713
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 49
               

               Conread position:
               465-715
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 49
               

               Conread position:
               465-715
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 49
               

               Conread position:
               465-715
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 49
               

               Conread position:
               465-715
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 49
               
Show alignments to all cow chromosomes.