Cow genome map
| Conread name: | Ova1-OVRM10152G02 |
| Conread position: | 7-144 |
| Cow position: | chr10:49310740-49310880 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 9-147 |
| Cow position: | chr10:33346856-33346995 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 9-148 |
| Cow position: | chr10:60489850-60489991 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 100, 38 |
| Conread position: | 9-434 |
| Cow position: | chr10:42628879-42629292 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 142 |
| Conread position: | 9-542 |
| Cow position: | chr10:46191614-46192155 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 368 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 137, 49 |
| Conread position: | 9-715 |
| Cow position: | chr10:31524054-31524727 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 138 |
| Conread position: | 13-144 |
| Cow position: | chr10:8328010-8327877 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 94, 19 |
| Conread position: | 15-147 |
| Cow position: | chr10:24298598-24298462 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 25-290 |
| Cow position: | chr10:8339168-8339423 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 200 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 82, 33 |
| Conread position: | 27-715 |
| Cow position: | chr10:38545951-38545283 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 89 |
| Conread position: | 187-669 |
| Cow position: | chr10:28931299-28930805 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 40 |
| Conread position: | 187-670 |
| Cow position: | chr10:14861358-14861839 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 22 |
| Conread position: | 215-715 |
| Cow position: | chr10:19511745-19512239 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 85 |
| Conread position: | 218-715 |
| Cow position: | chr10:38538363-38537871 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 38 |
| Conread position: | 246-639 |
| Cow position: | chr10:15860741-15860372 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 277 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 96, 41 |
| Conread position: | 264-438 |
| Cow position: | chr10:13364347-13364174 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 74, 108 |
| Conread position: | 264-438 |
| Cow position: | chr10:13365537-13365364 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 74, 108 |
| Conread position: | 278-631 |
| Cow position: | chr10:38847900-38848255 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 40 |
| Conread position: | 299-705 |
| Cow position: | chr10:3543020-3542608 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 220 |
| Conread position: | 304-715 |
| Cow position: | chr10:21900570-21900154 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 21 |
| Conread position: | 307-496 |
| Cow position: | chr10:41631718-41631905 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 35, 61 |
| Conread position: | 320-715 |
| Cow position: | chr10:41775012-41774610 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 283 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 323-580 |
| Cow position: | chr10:42748998-42749266 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 113, 22 |
| Conread position: | 325-715 |
| Cow position: | chr10:64302524-64302136 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 18 |
| Conread position: | 327-715 |
| Cow position: | chr10:11821007-11821398 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 16, 88 |
| Conread position: | 360-657 |
| Cow position: | chr10:44294635-44294345 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 215 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 273, 54 |
| Conread position: | 365-715 |
| Cow position: | chr10:8290255-8290609 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 39 |
| Conread position: | 373-715 |
| Cow position: | chr10:21487200-21487548 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 9 |
| Conread position: | 373-715 |
| Cow position: | chr10:38345077-38344731 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 31 |
| Conread position: | 400-689 |
| Cow position: | chr10:17432952-17432652 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 125 |
| Conread position: | 411-564 |
| Cow position: | chr10:25359726-25359877 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 37, 5 |
| Conread position: | 411-715 |
| Cow position: | chr10:57989667-57989361 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 5 |
| Conread position: | 416-564 |
| Cow position: | chr10:124641-124788 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 97 |
| Conread position: | 457-711 |
| Cow position: | chr10:19495920-19495657 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 199 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 175, 57 |
| Conread position: | 457-713 |
| Cow position: | chr10:14804202-14804458 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 57 |
| Conread position: | 457-713 |
| Cow position: | chr10:21400305-21400047 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 57 |
| Conread position: | 457-713 |
| Cow position: | chr10:25564892-25564637 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 55 |
| Conread position: | 457-713 |
| Cow position: | chr10:39180149-39180409 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 43 |
| Conread position: | 457-713 |
| Cow position: | chr10:41157813-41158071 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 57 |
| Conread position: | 465-715 |
| Cow position: | chr10:28641913-28642159 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 49 |
| Conread position: | 465-715 |
| Cow position: | chr10:51952248-51951996 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 49 |
Show alignments to all cow chromosomes.