Cow genome map
| Conread name: | Ova1-OVRM10152G02 |
| Conread position: | 6-147 |
| Cow position: | chr11:10050602-10050746 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 9-130 |
| Cow position: | chr11:17220321-17220198 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 9-421 |
| Cow position: | chr11:7316764-7317149 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 292 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 98, 79 |
| Conread position: | 9-715 |
| Cow position: | chr11:10090229-10090946 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 149 |
| Conread position: | 13-280 |
| Cow position: | chr11:8282973-8283224 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 96, 110 |
| Conread position: | 48-252 |
| Cow position: | chr11:30125106-30124906 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 37, 98 |
| Conread position: | 63-475 |
| Cow position: | chr11:7113836-7114232 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 47, 19 |
| Conread position: | 217-572 |
| Cow position: | chr11:39802203-39802566 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 6, 32 |
| Conread position: | 230-715 |
| Cow position: | chr11:28049429-28048940 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 59 |
| Conread position: | 262-573 |
| Cow position: | chr11:8261735-8261423 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 73, 25 |
| Conread position: | 262-577 |
| Cow position: | chr11:9220152-9219839 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 34, 127 |
| Conread position: | 262-714 |
| Cow position: | chr11:28063645-28064097 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 90 |
| Conread position: | 290-715 |
| Cow position: | chr11:21443154-21443574 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 67 |
| Conread position: | 307-566 |
| Cow position: | chr11:30124571-30124301 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 123, 64 |
| Conread position: | 307-682 |
| Cow position: | chr11:8283308-8283694 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 203 |
| Conread position: | 307-699 |
| Cow position: | chr11:59369669-59370073 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 215 |
| Conread position: | 307-715 |
| Cow position: | chr11:52886195-52885796 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 45 |
| Conread position: | 309-713 |
| Cow position: | chr11:17107834-17107425 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 39 |
| Conread position: | 331-679 |
| Cow position: | chr11:29233392-29233021 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 90, 196 |
| Conread position: | 351-573 |
| Cow position: | chr11:44495555-44495325 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 72, 171 |
| Conread position: | 353-715 |
| Cow position: | chr11:66727269-66727641 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 170 |
| Conread position: | 373-715 |
| Cow position: | chr11:44157330-44156982 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 31 |
| Conread position: | 380-715 |
| Cow position: | chr11:44251736-44252063 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 5 |
| Conread position: | 391-679 |
| Cow position: | chr11:33978283-33977974 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 44, 137 |
| Conread position: | 411-571 |
| Cow position: | chr11:10051282-10051440 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 14, 48 |
| Conread position: | 411-715 |
| Cow position: | chr11:10847407-10847714 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 5 |
| Conread position: | 411-715 |
| Cow position: | chr11:11988072-11988378 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 5 |
| Conread position: | 411-715 |
| Cow position: | chr11:23877267-23877574 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 5 |
| Conread position: | 411-715 |
| Cow position: | chr11:38835466-38835160 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 5 |
| Conread position: | 411-715 |
| Cow position: | chr11:53432101-53431795 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 5 |
| Conread position: | 416-715 |
| Cow position: | chr11:4270896-4270591 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 103 |
| Conread position: | 416-715 |
| Cow position: | chr11:43514665-43514366 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 5 |
| Conread position: | 457-713 |
| Cow position: | chr11:19064245-19063988 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 57 |
| Conread position: | 457-713 |
| Cow position: | chr11:67450502-67450760 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 57 |
| Conread position: | 457-715 |
| Cow position: | chr11:8245319-8245579 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 56 |
| Conread position: | 457-715 |
| Cow position: | chr11:57628042-57627774 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 57 |
| Conread position: | 465-713 |
| Cow position: | chr11:9734651-9734399 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 49 |
Show alignments to all cow chromosomes.