Cow genome map
| Conread name: | Ova1-OVRM10152G02 |
| Conread position: | 9-147 |
| Cow position: | chr15:12614900-12615040 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 9-147 |
| Cow position: | chr15:36626833-36626692 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 9-156 |
| Cow position: | chr15:40105300-40105451 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 95, 79 |
| Conread position: | 9-438 |
| Cow position: | chr15:35648398-35647984 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 333, 83 |
| Conread position: | 9-636 |
| Cow position: | chr15:36642452-36643064 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 102 |
| Conread position: | 25-487 |
| Cow position: | chr15:369831-369369 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 319 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 81, 41 |
| Conread position: | 163-715 |
| Cow position: | chr15:24794014-24794561 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 262 |
| Conread position: | 187-567 |
| Cow position: | chr15:11298721-11298336 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 257 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 32, 83 |
| Conread position: | 187-583 |
| Cow position: | chr15:24716557-24716942 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 271 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 87, 30 |
| Conread position: | 187-657 |
| Cow position: | chr15:12615162-12615619 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 84 |
| Conread position: | 187-715 |
| Cow position: | chr15:686615-687142 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 18 |
| Conread position: | 187-715 |
| Cow position: | chr15:36626576-36626072 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 19 |
| Conread position: | 221-484 |
| Cow position: | chr15:23264783-23265051 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 121, 24 |
| Conread position: | 223-715 |
| Cow position: | chr15:4921864-4922364 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 28 |
| Conread position: | 281-696 |
| Cow position: | chr15:9739872-9739456 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 283 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 62, 18 |
| Conread position: | 312-715 |
| Cow position: | chr15:40105671-40106072 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 17 |
| Conread position: | 313-711 |
| Cow position: | chr15:16507789-16508196 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 218 |
| Conread position: | 332-715 |
| Cow position: | chr15:1237509-1237890 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 152 |
| Conread position: | 342-707 |
| Cow position: | chr15:17218569-17218200 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 255 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 5, 174 |
| Conread position: | 342-715 |
| Cow position: | chr15:51714786-51715172 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 182 |
| Conread position: | 351-713 |
| Cow position: | chr15:3842570-3842213 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 23 |
| Conread position: | 358-713 |
| Cow position: | chr15:6622935-6623301 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 251 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 6, 168 |
| Conread position: | 363-713 |
| Cow position: | chr15:7966120-7965749 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 58, 165 |
| Conread position: | 379-715 |
| Cow position: | chr15:32494507-32494173 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 6 |
| Conread position: | 390-715 |
| Cow position: | chr15:24294981-24295308 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 42 |
| Conread position: | 401-715 |
| Cow position: | chr15:4385160-4385477 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 118 |
| Conread position: | 410-715 |
| Cow position: | chr15:2076555-2076861 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 6 |
| Conread position: | 411-715 |
| Cow position: | chr15:15347211-15346906 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 5 |
| Conread position: | 411-715 |
| Cow position: | chr15:21665838-21665532 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 5 |
| Conread position: | 411-715 |
| Cow position: | chr15:51216497-51216799 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 5 |
| Conread position: | 412-715 |
| Cow position: | chr15:7544790-7545091 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 21 |
| Conread position: | 416-715 |
| Cow position: | chr15:12421257-12420952 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 36 |
| Conread position: | 457-713 |
| Cow position: | chr15:444555-444811 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 57 |
| Conread position: | 457-713 |
| Cow position: | chr15:28490193-28489942 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 24 |
| Conread position: | 465-707 |
| Cow position: | chr15:42320465-42320223 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 49 |
| Conread position: | 465-715 |
| Cow position: | chr15:1519194-1518942 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 49 |
| Conread position: | 465-715 |
| Cow position: | chr15:4142862-4142610 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 49 |
Show alignments to all cow chromosomes.