Cow genome map
| Conread name: | Ova1-OVRM10152G02 |
| Conread position: | 8-156 |
| Cow position: | chr16:31375792-31375640 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 99, 16 |
| Conread position: | 9-143 |
| Cow position: | chr16:32935665-32935796 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 80, 15 |
| Conread position: | 9-162 |
| Cow position: | chr16:5889408-5889565 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 9-217 |
| Cow position: | chr16:23807458-23807660 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 38, 87 |
| Conread position: | 9-708 |
| Cow position: | chr16:29033206-29033901 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 135 |
| Conread position: | 9-715 |
| Cow position: | chr16:25156734-25156011 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 147 |
| Conread position: | 9-715 |
| Cow position: | chr16:25257094-25257802 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 141 |
| Conread position: | 9-715 |
| Cow position: | chr16:42739933-42739240 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 25 |
| Conread position: | 9-715 |
| Cow position: | chr16:49235661-49234964 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 150 |
| Conread position: | 10-214 |
| Cow position: | chr16:49257092-49256896 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 99, 139 |
| Conread position: | 187-434 |
| Cow position: | chr16:18499381-18499134 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 155, 243 |
| Conread position: | 187-479 |
| Cow position: | chr16:336044-336340 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 212 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 113, 37 |
| Conread position: | 187-683 |
| Cow position: | chr16:18764274-18763791 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 37 |
| Conread position: | 191-434 |
| Cow position: | chr16:30304934-30305179 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 107, 65 |
| Conread position: | 207-715 |
| Cow position: | chr16:23807784-23808287 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 76 |
| Conread position: | 219-498 |
| Cow position: | chr16:49256764-49256475 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 220-715 |
| Cow position: | chr16:16272240-16271736 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 141 |
| Conread position: | 223-676 |
| Cow position: | chr16:5889894-5890339 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 58 |
| Conread position: | 290-555 |
| Cow position: | chr16:37457154-37456876 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 52, 12 |
| Conread position: | 373-715 |
| Cow position: | chr16:25441143-25441493 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 373-715 |
| Cow position: | chr16:25457946-25457598 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 380-715 |
| Cow position: | chr16:15184336-15184662 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 5 |
| Conread position: | 395-715 |
| Cow position: | chr16:2483587-2483274 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 14 |
| Conread position: | 410-715 |
| Cow position: | chr16:23982870-23983175 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 6 |
| Conread position: | 411-715 |
| Cow position: | chr16:407470-407165 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 5 |
| Conread position: | 411-715 |
| Cow position: | chr16:2727727-2727421 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 5 |
| Conread position: | 416-715 |
| Cow position: | chr16:5483884-5484186 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 99 |
| Conread position: | 416-715 |
| Cow position: | chr16:10203869-10203573 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 84 |
| Conread position: | 423-715 |
| Cow position: | chr16:43897702-43897405 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 95 |
| Conread position: | 424-715 |
| Cow position: | chr16:25341536-25341824 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 95 |
| Conread position: | 426-705 |
| Cow position: | chr16:25085217-25085484 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 450-715 |
| Cow position: | chr16:31832222-31832492 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 67 |
| Conread position: | 456-713 |
| Cow position: | chr16:41163460-41163201 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 58 |
| Conread position: | 457-713 |
| Cow position: | chr16:5661450-5661707 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 54 |
| Conread position: | 462-715 |
| Cow position: | chr16:25188241-25188494 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 52 |
| Conread position: | 465-715 |
| Cow position: | chr16:28170756-28170506 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 49 |
Show alignments to all cow chromosomes.