Cow genome map
| Conread name: | Ova1-OVRM10152G02 |
| Conread position: | 9-243 |
| Cow position: | chr17:15371118-15371342 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 98, 23 |
| Conread position: | 15-376 |
| Cow position: | chr17:14325439-14325091 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 136 |
| Conread position: | 159-715 |
| Cow position: | chr17:12670202-12669639 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 48 |
| Conread position: | 162-345 |
| Cow position: | chr17:36987482-36987304 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 176, 21 |
| Conread position: | 171-715 |
| Cow position: | chr17:4081947-4082492 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 364 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 81, 106 |
| Conread position: | 187-460 |
| Cow position: | chr17:22557909-22558184 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 154, 23 |
| Conread position: | 187-466 |
| Cow position: | chr17:18193503-18193773 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 154, 41 |
| Conread position: | 187-477 |
| Cow position: | chr17:20401986-20402276 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 208 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 109, 12 |
| Conread position: | 187-715 |
| Cow position: | chr17:19019478-19020012 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 58 |
| Conread position: | 194-713 |
| Cow position: | chr17:42264829-42265362 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 52 |
| Conread position: | 230-715 |
| Cow position: | chr17:18300453-18299956 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 131 |
| Conread position: | 307-660 |
| Cow position: | chr17:20488021-20488385 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 35, 222 |
| Conread position: | 307-713 |
| Cow position: | chr17:3708760-3708342 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 60 |
| Conread position: | 313-489 |
| Cow position: | chr17:152073-151888 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 8, 24 |
| Conread position: | 319-711 |
| Cow position: | chr17:15384328-15384721 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 5 |
| Conread position: | 323-715 |
| Cow position: | chr17:1657800-1657405 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 283 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 21, 66 |
| Conread position: | 373-715 |
| Cow position: | chr17:2579712-2580060 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 31 |
| Conread position: | 373-715 |
| Cow position: | chr17:18103588-18103245 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 395-715 |
| Cow position: | chr17:6068679-6068999 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 29 |
| Conread position: | 411-703 |
| Cow position: | chr17:19269227-19268935 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 5 |
| Conread position: | 411-715 |
| Cow position: | chr17:3642697-3642390 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 5 |
| Conread position: | 411-715 |
| Cow position: | chr17:11087585-11087282 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 5 |
| Conread position: | 411-715 |
| Cow position: | chr17:40804956-40805257 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 5 |
| Conread position: | 414-702 |
| Cow position: | chr17:1382675-1382389 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 51 |
| Conread position: | 416-630 |
| Cow position: | chr17:25737802-25738018 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 7, 102 |
| Conread position: | 421-578 |
| Cow position: | chr17:13856626-13856468 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 35, 95 |
| Conread position: | 457-613 |
| Cow position: | chr17:181541-181692 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 457-622 |
| Cow position: | chr17:2248406-2248243 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 457-713 |
| Cow position: | chr17:15435969-15436227 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 57 |
| Conread position: | 457-713 |
| Cow position: | chr17:20665548-20665289 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 57 |
| Conread position: | 457-713 |
| Cow position: | chr17:24782345-24782601 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 57 |
| Conread position: | 457-715 |
| Cow position: | chr17:14216848-14216595 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 465-713 |
| Cow position: | chr17:2262288-2262539 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 49 |
| Conread position: | 465-715 |
| Cow position: | chr17:31767853-31767601 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 49 |
Show alignments to all cow chromosomes.