Cow genome map
| Conread name: | Ova1-OVRM10152G02 |
| Conread position: | 6-139 |
| Cow position: | chr2:7901997-7902133 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 6-291 |
| Cow position: | chr2:36053933-36053662 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 101, 145 |
| Conread position: | 6-433 |
| Cow position: | chr2:16288944-16289355 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 76 |
| Conread position: | 7-161 |
| Cow position: | chr2:74391385-74391227 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 8-715 |
| Cow position: | chr2:39622010-39622705 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 11 |
| Conread position: | 9-131 |
| Cow position: | chr2:28616484-28616362 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 97, 14 |
| Conread position: | 9-391 |
| Cow position: | chr2:2356743-2356377 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 332, 15 |
| Conread position: | 9-475 |
| Cow position: | chr2:14822223-14822679 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 140 |
| Conread position: | 9-715 |
| Cow position: | chr2:28643409-28642723 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 50 |
| Conread position: | 9-715 |
| Cow position: | chr2:34565208-34564521 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 132 |
| Conread position: | 13-333 |
| Cow position: | chr2:1672941-1672638 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 94, 76 |
| Conread position: | 14-144 |
| Cow position: | chr2:24393442-24393309 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 33-476 |
| Cow position: | chr2:15577825-15577390 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 115 |
| Conread position: | 162-711 |
| Cow position: | chr2:5485418-5484882 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 17 |
| Conread position: | 179-451 |
| Cow position: | chr2:3836635-3836367 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 13, 27 |
| Conread position: | 187-489 |
| Cow position: | chr2:903410-903711 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 22, 42 |
| Conread position: | 187-715 |
| Cow position: | chr2:11729439-11729956 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 99 |
| Conread position: | 187-715 |
| Cow position: | chr2:38372974-38373499 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 338 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 77 |
| Conread position: | 203-617 |
| Cow position: | chr2:28747730-28748145 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 270 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 139, 148 |
| Conread position: | 215-472 |
| Cow position: | chr2:782147-781881 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 196 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 242-698 |
| Cow position: | chr2:63977923-63978388 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 308 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 72, 84 |
| Conread position: | 245-711 |
| Cow position: | chr2:42333242-42332774 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 121 |
| Conread position: | 267-584 |
| Cow position: | chr2:78741941-78742273 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 71, 120 |
| Conread position: | 281-608 |
| Cow position: | chr2:1362814-1363147 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 119 |
| Conread position: | 285-715 |
| Cow position: | chr2:35355347-35355793 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 74 |
| Conread position: | 288-653 |
| Cow position: | chr2:7902684-7903051 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 83 |
| Conread position: | 290-672 |
| Cow position: | chr2:37790168-37789803 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 272 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 52, 82 |
| Conread position: | 290-715 |
| Cow position: | chr2:36053343-36052901 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 238 |
| Conread position: | 304-696 |
| Cow position: | chr2:53553449-53553845 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 254 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 39, 9 |
| Conread position: | 313-663 |
| Cow position: | chr2:36030653-36030300 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 213 |
| Conread position: | 317-475 |
| Cow position: | chr2:73192675-73192830 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 26, 90 |
| Conread position: | 320-707 |
| Cow position: | chr2:29029842-29030228 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 22, 84 |
| Conread position: | 356-705 |
| Cow position: | chr2:20902797-20902466 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 83 |
| Conread position: | 358-715 |
| Cow position: | chr2:28650487-28650134 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 24 |
| Conread position: | 360-715 |
| Cow position: | chr2:10268922-10268562 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 22 |
| Conread position: | 411-694 |
| Cow position: | chr2:50983436-50983152 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 5 |
| Conread position: | 411-715 |
| Cow position: | chr2:199002-198690 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 103 |
| Conread position: | 411-715 |
| Cow position: | chr2:16900042-16900348 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 5 |
| Conread position: | 411-715 |
| Cow position: | chr2:53329543-53329853 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 104 |
| Conread position: | 416-597 |
| Cow position: | chr2:4926379-4926199 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 28, 99 |
| Conread position: | 416-715 |
| Cow position: | chr2:8118329-8118635 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 101 |
| Conread position: | 416-715 |
| Cow position: | chr2:11159330-11159028 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 99 |
| Conread position: | 424-669 |
| Cow position: | chr2:52062469-52062718 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 94 |
| Conread position: | 424-715 |
| Cow position: | chr2:24146661-24146957 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 94 |
| Conread position: | 450-697 |
| Cow position: | chr2:51990708-51990461 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 13, 67 |
| Conread position: | 450-715 |
| Cow position: | chr2:51990426-51990157 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 67 |
| Conread position: | 457-711 |
| Cow position: | chr2:39421411-39421665 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 57 |
| Conread position: | 457-713 |
| Cow position: | chr2:9907745-9908003 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 57 |
| Conread position: | 457-713 |
| Cow position: | chr2:10611794-10611541 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 55 |
| Conread position: | 457-713 |
| Cow position: | chr2:52616302-52616560 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 57 |
| Conread position: | 457-713 |
| Cow position: | chr2:54737338-54737596 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 57 |
| Conread position: | 457-713 |
| Cow position: | chr2:57335028-57335286 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 57 |
| Conread position: | 457-715 |
| Cow position: | chr2:2380940-2381199 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 57 |
| Conread position: | 457-715 |
| Cow position: | chr2:19011179-19011439 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 57 |
| Conread position: | 457-715 |
| Cow position: | chr2:49472079-49472339 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 57 |
| Conread position: | 465-715 |
| Cow position: | chr2:3324724-3324468 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 49 |
| Conread position: | 465-715 |
| Cow position: | chr2:80955796-80955544 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 49 |
Show alignments to all cow chromosomes.