Cow genome map
| Conread name: | Ova1-OVRM10152G02 |
| Conread position: | 4-482 |
| Cow position: | chr28:7817358-7817825 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 165 |
| Conread position: | 7-583 |
| Cow position: | chr28:21359227-21359806 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 147 |
| Conread position: | 9-162 |
| Cow position: | chr28:11357486-11357330 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 98, 129 |
| Conread position: | 9-707 |
| Cow position: | chr28:10071207-10071878 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 142 |
| Conread position: | 9-715 |
| Cow position: | chr28:5797659-5798348 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 58 |
| Conread position: | 11-715 |
| Cow position: | chr28:5812921-5813613 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 331, 26 |
| Conread position: | 12-711 |
| Cow position: | chr28:7790054-7789353 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 137 |
| Conread position: | 13-322 |
| Cow position: | chr28:2989474-2989177 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 219 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 93, 53 |
| Conread position: | 34-467 |
| Cow position: | chr28:5764499-5764906 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 307 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 73, 101 |
| Conread position: | 162-448 |
| Cow position: | chr28:28117864-28118161 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 133, 182 |
| Conread position: | 187-405 |
| Cow position: | chr28:11356989-11356769 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 187-534 |
| Cow position: | chr28:29092504-29092147 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 156, 29 |
| Conread position: | 187-709 |
| Cow position: | chr28:14913585-14914114 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 349 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 156, 24 |
| Conread position: | 212-708 |
| Cow position: | chr28:10647295-10646798 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 27 |
| Conread position: | 252-445 |
| Cow position: | chr28:24704363-24704557 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 290-537 |
| Cow position: | chr28:32330533-32330282 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 53, 71 |
| Conread position: | 291-715 |
| Cow position: | chr28:10497846-10497418 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 26 |
| Conread position: | 295-462 |
| Cow position: | chr28:10462575-10462410 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 47, 12 |
| Conread position: | 307-631 |
| Cow position: | chr28:10617636-10617313 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 143 |
| Conread position: | 321-512 |
| Cow position: | chr28:8721152-8720952 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 325-715 |
| Cow position: | chr28:2989035-2988639 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 36 |
| Conread position: | 325-715 |
| Cow position: | chr28:10230015-10229617 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 99 |
| Conread position: | 346-715 |
| Cow position: | chr28:3020518-3020150 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 75 |
| Conread position: | 357-715 |
| Cow position: | chr28:17388730-17389086 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 25 |
| Conread position: | 388-715 |
| Cow position: | chr28:2083867-2084196 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 12 |
| Conread position: | 390-715 |
| Cow position: | chr28:1167602-1167278 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 19 |
| Conread position: | 390-715 |
| Cow position: | chr28:10581706-10581380 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 21 |
| Conread position: | 411-698 |
| Cow position: | chr28:29820032-29820320 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 5 |
| Conread position: | 411-709 |
| Cow position: | chr28:34594277-34594576 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 5 |
| Conread position: | 411-715 |
| Cow position: | chr28:5114000-5113694 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 5 |
| Conread position: | 411-715 |
| Cow position: | chr28:5566443-5566753 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 5 |
| Conread position: | 411-715 |
| Cow position: | chr28:5751407-5751105 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 5 |
| Conread position: | 411-715 |
| Cow position: | chr28:12150602-12150907 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 5 |
| Conread position: | 411-715 |
| Cow position: | chr28:17666999-17666695 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 5 |
| Conread position: | 411-715 |
| Cow position: | chr28:32792082-32791775 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 5 |
| Conread position: | 416-715 |
| Cow position: | chr28:13460268-13460571 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 100 |
| Conread position: | 461-715 |
| Cow position: | chr28:14750888-14751143 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 53 |
| Conread position: | 464-715 |
| Cow position: | chr28:3191895-3191652 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 50 |
| Conread position: | 465-715 |
| Cow position: | chr28:2724577-2724325 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 49 |
Show alignments to all cow chromosomes.