Cow genome map


           Conread name:
           Ova1-OVRM10152G02
        

               Conread position:
               6-334
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               227
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               7-274
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               100, 23
               

               Conread position:
               7-325
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               228
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               99, 131
               

               Conread position:
               9-142
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               97, 68
               

               Conread position:
               9-144
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               9-154
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               9-290
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               98, 48
               

               Conread position:
               9-327
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               98, 141
               

               Conread position:
               9-667
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 147
               

               Conread position:
               9-715
               

               Cow position:
               
               

               Alignm length:
               724
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 34
               

               Conread position:
               24-715
               

               Cow position:
               
               

               Alignm length:
               726
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 37
               

               Conread position:
               59-715
               

               Cow position:
               
               

               Alignm length:
               672
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 67
               

               Conread position:
               162-659
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 345
               

               Conread position:
               187-713
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               358
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               92, 62
               

               Conread position:
               187-715
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 29
               

               Conread position:
               187-715
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               349
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               14, 49
               

               Conread position:
               234-715
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 35
               

               Conread position:
               262-563
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               164, 67
               

               Conread position:
               304-715
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               300
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               39, 48
               

               Conread position:
               307-715
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               280
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               35, 44
               

               Conread position:
               313-432
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               313-715
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               127, 5
               

               Conread position:
               325-715
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 27
               

               Conread position:
               351-708
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               249
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               88, 63
               

               Conread position:
               360-707
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               82, 127
               

               Conread position:
               361-535
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               373-715
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 27
               

               Conread position:
               373-715
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 27
               

               Conread position:
               379-715
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 6
               

               Conread position:
               385-714
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 138
               

               Conread position:
               411-715
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 5
               

               Conread position:
               411-715
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 5
               

               Conread position:
               411-715
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               37, 5
               

               Conread position:
               412-715
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               5, 21
               

               Conread position:
               416-715
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 103
               

               Conread position:
               416-715
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 102
               

               Conread position:
               417-668
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               7, 31
               

               Conread position:
               417-715
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 100
               

               Conread position:
               424-715
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 92
               

               Conread position:
               442-689
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               191, 75
               

               Conread position:
               457-713
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 57
               

               Conread position:
               457-713
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 57
               

               Conread position:
               457-713
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 57
               

               Conread position:
               457-713
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 57
               

               Conread position:
               457-713
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 57
               

               Conread position:
               457-713
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 57
               

               Conread position:
               457-713
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 57
               

               Conread position:
               457-713
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 55
               

               Conread position:
               457-713
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 57
               

               Conread position:
               457-715
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 57
               

               Conread position:
               457-715
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 57
               

               Conread position:
               460-579
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               461-681
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 53
               

               Conread position:
               465-713
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 49
               

               Conread position:
               465-713
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 50
               

               Conread position:
               465-715
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 49
               

               Conread position:
               465-715
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 49
               
Show alignments to all cow chromosomes.