Cow genome map
| Conread name: | Ova1-OVRM10152G02 |
| Conread position: | 9-138 |
| Cow position: | chr5:46630431-46630302 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 122, 95 |
| Conread position: | 9-147 |
| Cow position: | chr5:41962228-41962092 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 9-159 |
| Cow position: | chr5:27059114-27058957 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 9-159 |
| Cow position: | chr5:27060017-27059860 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 9-283 |
| Cow position: | chr5:49593445-49593179 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 98, 142 |
| Conread position: | 15-715 |
| Cow position: | chr5:46659725-46660418 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 143 |
| Conread position: | 61-580 |
| Cow position: | chr5:61272800-61272301 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 90 |
| Conread position: | 160-592 |
| Cow position: | chr5:41962125-41961684 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 213 |
| Conread position: | 162-715 |
| Cow position: | chr5:39247168-39246622 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 147 |
| Conread position: | 172-715 |
| Cow position: | chr5:27001880-27002412 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 11 |
| Conread position: | 187-554 |
| Cow position: | chr5:25000380-25000001 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 251 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 42, 32 |
| Conread position: | 187-581 |
| Cow position: | chr5:18272386-18272792 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 17, 44 |
| Conread position: | 187-715 |
| Cow position: | chr5:23228512-23229072 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 383 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 57, 43 |
| Conread position: | 194-527 |
| Cow position: | chr5:18117316-18116991 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 8 |
| Conread position: | 217-715 |
| Cow position: | chr5:41528879-41528373 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 71 |
| Conread position: | 225-534 |
| Cow position: | chr5:26068427-26068111 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 114, 100 |
| Conread position: | 225-543 |
| Cow position: | chr5:1712-2025 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 202, 42 |
| Conread position: | 288-511 |
| Cow position: | chr5:51164303-51164541 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 227 |
| Conread position: | 313-602 |
| Cow position: | chr5:27058750-27058474 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 314-715 |
| Cow position: | chr5:35525784-35526195 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 278 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 30, 181 |
| Conread position: | 320-715 |
| Cow position: | chr5:28023489-28023896 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 116, 16 |
| Conread position: | 378-698 |
| Cow position: | chr5:56857151-56856818 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 231 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 56, 144 |
| Conread position: | 390-713 |
| Cow position: | chr5:55628048-55628370 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 395-715 |
| Cow position: | chr5:46738510-46738193 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 14 |
| Conread position: | 411-715 |
| Cow position: | chr5:73489480-73489174 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 5 |
| Conread position: | 416-715 |
| Cow position: | chr5:31101540-31101244 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 26 |
| Conread position: | 416-715 |
| Cow position: | chr5:57482465-57482158 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 103 |
| Conread position: | 422-692 |
| Cow position: | chr5:49119193-49118918 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 97 |
| Conread position: | 424-715 |
| Cow position: | chr5:7273918-7274212 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 38 |
| Conread position: | 454-684 |
| Cow position: | chr5:59482368-59482604 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 9, 63 |
| Conread position: | 457-710 |
| Cow position: | chr5:10843299-10843042 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 57 |
| Conread position: | 457-713 |
| Cow position: | chr5:6588900-6588641 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 56 |
| Conread position: | 457-713 |
| Cow position: | chr5:18122348-18122093 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 52 |
| Conread position: | 457-713 |
| Cow position: | chr5:27909152-27908894 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 57 |
| Conread position: | 457-713 |
| Cow position: | chr5:31706694-31706953 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 57 |
| Conread position: | 457-713 |
| Cow position: | chr5:46664123-46664373 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 57 |
| Conread position: | 457-715 |
| Cow position: | chr5:59060738-59060998 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 57 |
| Conread position: | 465-713 |
| Cow position: | chr5:10776136-10775886 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 49 |
| Conread position: | 465-715 |
| Cow position: | chr5:18666122-18666374 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 49 |
| Conread position: | 465-715 |
| Cow position: | chr5:54932090-54931839 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 49 |
| Conread position: | 467-715 |
| Cow position: | chr5:51770813-51770561 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 63, 46 |
Show alignments to all cow chromosomes.