Cow genome map
| Conread name: | Ova1-OVRM10152G02 |
| Conread position: | 7-209 |
| Cow position: | chr6:10641309-10641504 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 76, 144 |
| Conread position: | 7-346 |
| Cow position: | chr6:37116285-37116603 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 245 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 100, 140 |
| Conread position: | 8-494 |
| Cow position: | chr6:38232428-38232901 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 76 |
| Conread position: | 9-400 |
| Cow position: | chr6:43608206-43607828 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 56 |
| Conread position: | 9-600 |
| Cow position: | chr6:6476337-6475749 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 91 |
| Conread position: | 162-520 |
| Cow position: | chr6:42616425-42616765 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 84, 32 |
| Conread position: | 187-513 |
| Cow position: | chr6:35434135-35434458 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 104, 32 |
| Conread position: | 187-707 |
| Cow position: | chr6:66541608-66542162 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 372 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 37, 59 |
| Conread position: | 187-715 |
| Cow position: | chr6:35419833-35419320 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 351 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 153, 165 |
| Conread position: | 221-715 |
| Cow position: | chr6:10643561-10644076 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 164 |
| Conread position: | 290-715 |
| Cow position: | chr6:2887269-2887709 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 52 |
| Conread position: | 290-715 |
| Cow position: | chr6:15476992-15477433 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 202 |
| Conread position: | 301-706 |
| Cow position: | chr6:33995219-33994808 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 325-715 |
| Cow position: | chr6:8021048-8021441 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 201 |
| Conread position: | 364-715 |
| Cow position: | chr6:38900998-38900643 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 253 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 24, 41 |
| Conread position: | 373-715 |
| Cow position: | chr6:8761124-8760777 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 373-715 |
| Cow position: | chr6:15280371-15280029 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 373-715 |
| Cow position: | chr6:20560931-20560584 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 9 |
| Conread position: | 373-715 |
| Cow position: | chr6:34892825-34892477 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 379-670 |
| Cow position: | chr6:44550918-44550609 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 56, 151 |
| Conread position: | 390-715 |
| Cow position: | chr6:65841788-65842113 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 21 |
| Conread position: | 391-625 |
| Cow position: | chr6:43607505-43607269 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 49, 16 |
| Conread position: | 407-715 |
| Cow position: | chr6:39437760-39438074 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 112 |
| Conread position: | 410-715 |
| Cow position: | chr6:36526268-36526577 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 6 |
| Conread position: | 416-715 |
| Cow position: | chr6:913876-914157 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 7, 103 |
| Conread position: | 416-715 |
| Cow position: | chr6:15140957-15140657 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 99 |
| Conread position: | 416-715 |
| Cow position: | chr6:17046278-17046582 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 5 |
| Conread position: | 416-715 |
| Cow position: | chr6:30274956-30274650 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 103 |
| Conread position: | 416-715 |
| Cow position: | chr6:58026980-58027276 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 98 |
| Conread position: | 417-692 |
| Cow position: | chr6:3544706-3544991 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 9, 103 |
| Conread position: | 418-715 |
| Cow position: | chr6:13317278-13316979 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 6 |
| Conread position: | 424-715 |
| Cow position: | chr6:40867329-40867033 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 93 |
| Conread position: | 450-715 |
| Cow position: | chr6:2374952-2375223 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 68 |
| Conread position: | 450-715 |
| Cow position: | chr6:65821874-65821597 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 13, 67 |
| Conread position: | 456-713 |
| Cow position: | chr6:13104319-13104577 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 57 |
| Conread position: | 457-693 |
| Cow position: | chr6:28275245-28275488 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 186 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 102, 57 |
| Conread position: | 457-711 |
| Cow position: | chr6:13847287-13847546 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 57 |
| Conread position: | 457-713 |
| Cow position: | chr6:331204-330946 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 57 |
| Conread position: | 457-713 |
| Cow position: | chr6:13944169-13944427 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 57 |
| Conread position: | 457-713 |
| Cow position: | chr6:16052141-16052400 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 57 |
| Conread position: | 457-713 |
| Cow position: | chr6:39908789-39909047 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 57 |
| Conread position: | 465-597 |
| Cow position: | chr6:58408642-58408512 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 49, 0 |
Show alignments to all cow chromosomes.