Cow genome map
| Conread name: | Ova1-OVRM10152G02 |
| Conread position: | 6-160 |
| Cow position: | chr7:49290900-49291059 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 7-139 |
| Cow position: | chr7:47050923-47051058 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 7-160 |
| Cow position: | chr7:52804476-52804321 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 91, 16 |
| Conread position: | 7-285 |
| Cow position: | chr7:54196017-54195759 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 100, 142 |
| Conread position: | 9-147 |
| Cow position: | chr7:21310447-21310588 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 9-267 |
| Cow position: | chr7:24934724-24934479 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 98, 37 |
| Conread position: | 9-291 |
| Cow position: | chr7:68777913-68777650 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 100, 42 |
| Conread position: | 9-482 |
| Cow position: | chr7:53990994-53991442 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 125 |
| Conread position: | 9-568 |
| Cow position: | chr7:3155007-3155585 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 85 |
| Conread position: | 9-715 |
| Cow position: | chr7:29370346-29369681 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 9-715 |
| Cow position: | chr7:29470363-29471069 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 88 |
| Conread position: | 30-715 |
| Cow position: | chr7:51014208-51014890 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 59 |
| Conread position: | 187-477 |
| Cow position: | chr7:23836626-23836908 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 95, 26 |
| Conread position: | 187-714 |
| Cow position: | chr7:27560476-27559973 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 344 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 19, 28 |
| Conread position: | 187-715 |
| Cow position: | chr7:58993669-58994206 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 32 |
| Conread position: | 215-715 |
| Cow position: | chr7:68908426-68908932 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 146 |
| Conread position: | 217-715 |
| Cow position: | chr7:4415477-4415991 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 311 |
| Conread position: | 230-713 |
| Cow position: | chr7:58377646-58377154 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 39 |
| Conread position: | 291-580 |
| Cow position: | chr7:54644326-54644036 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 214 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 145, 45 |
| Conread position: | 299-488 |
| Cow position: | chr7:6488269-6488079 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 72 |
| Conread position: | 299-593 |
| Cow position: | chr7:1734602-1734298 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 43, 228 |
| Conread position: | 307-713 |
| Cow position: | chr7:48634636-48635047 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 35 |
| Conread position: | 309-459 |
| Cow position: | chr7:60460536-60460388 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 33, 12 |
| Conread position: | 313-584 |
| Cow position: | chr7:55280124-55279861 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 29, 51 |
| Conread position: | 317-517 |
| Cow position: | chr7:59137048-59137253 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 26, 195 |
| Conread position: | 323-512 |
| Cow position: | chr7:21394651-21394458 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 324-715 |
| Cow position: | chr7:63951201-63950808 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 279 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 93, 19 |
| Conread position: | 328-581 |
| Cow position: | chr7:59028611-59028863 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 8, 40 |
| Conread position: | 334-529 |
| Cow position: | chr7:49291851-49292041 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 40 |
| Conread position: | 364-643 |
| Cow position: | chr7:59683537-59683813 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 75, 65 |
| Conread position: | 373-715 |
| Cow position: | chr7:21127392-21127046 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 9 |
| Conread position: | 407-715 |
| Cow position: | chr7:39792058-39792386 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 109 |
| Conread position: | 411-643 |
| Cow position: | chr7:54603164-54603393 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 15, 5 |
| Conread position: | 411-715 |
| Cow position: | chr7:13537271-13536967 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 5 |
| Conread position: | 411-715 |
| Cow position: | chr7:14139288-14138982 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 5 |
| Conread position: | 411-715 |
| Cow position: | chr7:20305180-20304871 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 133, 20 |
| Conread position: | 411-715 |
| Cow position: | chr7:21985712-21986020 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 5 |
| Conread position: | 411-715 |
| Cow position: | chr7:34149411-34149717 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 5 |
| Conread position: | 412-715 |
| Cow position: | chr7:8144935-8144626 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 106 |
| Conread position: | 416-687 |
| Cow position: | chr7:19924514-19924234 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 103 |
| Conread position: | 416-709 |
| Cow position: | chr7:67799168-67799463 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 98 |
| Conread position: | 416-715 |
| Cow position: | chr7:10431105-10430805 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 100 |
| Conread position: | 416-715 |
| Cow position: | chr7:46901768-46901464 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 101 |
| Conread position: | 416-715 |
| Cow position: | chr7:55537605-55537304 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 98 |
| Conread position: | 424-715 |
| Cow position: | chr7:27786942-27787247 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 94 |
| Conread position: | 457-713 |
| Cow position: | chr7:7257545-7257784 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 457-713 |
| Cow position: | chr7:11446908-11447167 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 57 |
| Conread position: | 457-715 |
| Cow position: | chr7:65811199-65811449 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 176, 57 |
| Conread position: | 465-713 |
| Cow position: | chr7:6648296-6648046 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 49 |
| Conread position: | 465-715 |
| Cow position: | chr7:16512-16261 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 49 |
| Conread position: | 465-715 |
| Cow position: | chr7:3300796-3300544 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 49 |
| Conread position: | 465-715 |
| Cow position: | chr7:20515412-20515160 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 49 |
| Conread position: | 465-715 |
| Cow position: | chr7:21320516-21320768 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 49 |
| Conread position: | 465-715 |
| Cow position: | chr7:60463509-60463761 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 49 |
Show alignments to all cow chromosomes.