Cow genome map


           Conread name:
           Ova1-OVRM10152G02
        

               Conread position:
               7-715
               

               Cow position:
               
               

               Alignm length:
               732
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 118
               

               Conread position:
               9-157
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               9-715
               

               Cow position:
               
               

               Alignm length:
               724
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 143
               

               Conread position:
               42-263
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               65, 46
               

               Conread position:
               187-542
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               156, 16
               

               Conread position:
               187-715
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 18
               

               Conread position:
               191-715
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               286, 119
               

               Conread position:
               194-425
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               148, 107
               

               Conread position:
               213-433
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               129, 75
               

               Conread position:
               213-715
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 318
               

               Conread position:
               247-559
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               232
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               54, 285
               

               Conread position:
               254-483
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               281-429
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               61, 134
               

               Conread position:
               291-652
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 211
               

               Conread position:
               299-715
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 235
               

               Conread position:
               307-431
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               35, 79
               

               Conread position:
               314-715
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               270
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               29, 34
               

               Conread position:
               320-715
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               286
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               23, 5
               

               Conread position:
               325-714
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               273
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               22, 56
               

               Conread position:
               373-715
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 27
               

               Conread position:
               373-715
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 27
               

               Conread position:
               377-715
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               229
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               63, 146
               

               Conread position:
               411-714
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 5
               

               Conread position:
               416-715
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 16
               

               Conread position:
               416-715
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 5
               

               Conread position:
               421-715
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 94
               

               Conread position:
               424-713
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 92
               

               Conread position:
               424-715
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 94
               

               Conread position:
               427-715
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 91
               

               Conread position:
               454-713
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 7
               

               Conread position:
               455-715
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 59
               

               Conread position:
               457-660
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               163
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               176, 57
               

               Conread position:
               457-662
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               176, 57
               

               Conread position:
               457-713
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 57
               

               Conread position:
               457-713
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 57
               

               Conread position:
               457-713
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 57
               

               Conread position:
               457-715
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 57
               

               Conread position:
               457-715
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 57
               

               Conread position:
               457-715
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 56
               

               Conread position:
               465-686
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 49
               

               Conread position:
               465-715
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 49
               

               Conread position:
               465-715
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 49
               
Show alignments to all cow chromosomes.