Cow genome map
| Conread name: | Ova1-OVRM10152G02 |
| Conread position: | 7-715 |
| Cow position: | chr9:13477143-13476429 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 118 |
| Conread position: | 9-157 |
| Cow position: | chr9:3803123-3803275 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 9-715 |
| Cow position: | chr9:44817940-44818631 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 143 |
| Conread position: | 42-263 |
| Cow position: | chr9:44794577-44794786 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 65, 46 |
| Conread position: | 187-542 |
| Cow position: | chr9:2203982-2204324 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 156, 16 |
| Conread position: | 187-715 |
| Cow position: | chr9:28688013-28688562 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 18 |
| Conread position: | 191-715 |
| Cow position: | chr9:20309195-20308698 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 119 |
| Conread position: | 194-425 |
| Cow position: | chr9:13222670-13222893 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 148, 107 |
| Conread position: | 213-433 |
| Cow position: | chr9:34721415-34721635 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 167 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 129, 75 |
| Conread position: | 213-715 |
| Cow position: | chr9:3803274-3803795 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 318 |
| Conread position: | 247-559 |
| Cow position: | chr9:2001032-2000704 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 232 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 54, 285 |
| Conread position: | 254-483 |
| Cow position: | chr9:44795053-44795294 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 281-429 |
| Cow position: | chr9:26709580-26709429 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 134 |
| Conread position: | 291-652 |
| Cow position: | chr9:3354661-3354290 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 211 |
| Conread position: | 299-715 |
| Cow position: | chr9:59425788-59426224 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 235 |
| Conread position: | 307-431 |
| Cow position: | chr9:43663598-43663719 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 35, 79 |
| Conread position: | 314-715 |
| Cow position: | chr9:47544791-47545190 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 270 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 320-715 |
| Cow position: | chr9:3937371-3936979 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 286 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 23, 5 |
| Conread position: | 325-714 |
| Cow position: | chr9:42555994-42556378 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 273 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 22, 56 |
| Conread position: | 373-715 |
| Cow position: | chr9:4532601-4532949 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 373-715 |
| Cow position: | chr9:37971100-37970757 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 377-715 |
| Cow position: | chr9:60464523-60464178 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 229 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 63, 146 |
| Conread position: | 411-714 |
| Cow position: | chr9:16175919-16176222 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 5 |
| Conread position: | 416-715 |
| Cow position: | chr9:30672524-30672821 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 16 |
| Conread position: | 416-715 |
| Cow position: | chr9:59536247-59536548 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 5 |
| Conread position: | 421-715 |
| Cow position: | chr9:9013259-9013553 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 94 |
| Conread position: | 424-713 |
| Cow position: | chr9:42309844-42310137 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 92 |
| Conread position: | 424-715 |
| Cow position: | chr9:59173999-59173695 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 94 |
| Conread position: | 427-715 |
| Cow position: | chr9:47002353-47002647 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 91 |
| Conread position: | 454-713 |
| Cow position: | chr9:17064198-17063938 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 7 |
| Conread position: | 455-715 |
| Cow position: | chr9:28678162-28678424 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 59 |
| Conread position: | 457-660 |
| Cow position: | chr9:25484062-25484267 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 163 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 176, 57 |
| Conread position: | 457-662 |
| Cow position: | chr9:60651521-60651314 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 176, 57 |
| Conread position: | 457-713 |
| Cow position: | chr9:222335-222079 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 57 |
| Conread position: | 457-713 |
| Cow position: | chr9:1076006-1075748 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 57 |
| Conread position: | 457-713 |
| Cow position: | chr9:45873538-45873795 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 57 |
| Conread position: | 457-715 |
| Cow position: | chr9:780613-780353 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 57 |
| Conread position: | 457-715 |
| Cow position: | chr9:25035654-25035394 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 57 |
| Conread position: | 457-715 |
| Cow position: | chr9:30826873-30827131 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 56 |
| Conread position: | 465-686 |
| Cow position: | chr9:16268571-16268794 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 49 |
| Conread position: | 465-715 |
| Cow position: | chr9:31064632-31064884 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 49 |
| Conread position: | 465-715 |
| Cow position: | chr9:49177628-49177376 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 49 |
Show alignments to all cow chromosomes.