Cow genome map

Conread name: Ova1-OVRM10152G02

Conread position: 7-715
Cow position: chr9:13477143-13476429 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 118

Conread position: 9-157
Cow position: chr9:3803123-3803275 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 9-715
Cow position: chr9:44817940-44818631 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 143

Conread position: 42-263
Cow position: chr9:44794577-44794786 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 65, 46

Conread position: 187-542
Cow position: chr9:2203982-2204324 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 239
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 156, 16

Conread position: 187-715
Cow position: chr9:28688013-28688562 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 18

Conread position: 191-715
Cow position: chr9:20309195-20308698 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 119

Conread position: 194-425
Cow position: chr9:13222670-13222893 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 148, 107

Conread position: 213-433
Cow position: chr9:34721415-34721635 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 129, 75

Conread position: 213-715
Cow position: chr9:3803274-3803795 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 318

Conread position: 247-559
Cow position: chr9:2001032-2000704 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 232
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 54, 285

Conread position: 254-483
Cow position: chr9:44795053-44795294 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 281-429
Cow position: chr9:26709580-26709429 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 134

Conread position: 291-652
Cow position: chr9:3354661-3354290 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 211

Conread position: 299-715
Cow position: chr9:59425788-59426224 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 235

Conread position: 307-431
Cow position: chr9:43663598-43663719 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 79

Conread position: 314-715
Cow position: chr9:47544791-47545190 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 270
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 29, 34

Conread position: 320-715
Cow position: chr9:3937371-3936979 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 286
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 23, 5

Conread position: 325-714
Cow position: chr9:42555994-42556378 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 273
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 22, 56

Conread position: 373-715
Cow position: chr9:4532601-4532949 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 27

Conread position: 373-715
Cow position: chr9:37971100-37970757 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 27

Conread position: 377-715
Cow position: chr9:60464523-60464178 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 229
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 63, 146

Conread position: 411-714
Cow position: chr9:16175919-16176222 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 5

Conread position: 416-715
Cow position: chr9:30672524-30672821 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 16

Conread position: 416-715
Cow position: chr9:59536247-59536548 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 5

Conread position: 421-715
Cow position: chr9:9013259-9013553 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 94

Conread position: 424-713
Cow position: chr9:42309844-42310137 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 92

Conread position: 424-715
Cow position: chr9:59173999-59173695 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 94

Conread position: 427-715
Cow position: chr9:47002353-47002647 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 91

Conread position: 454-713
Cow position: chr9:17064198-17063938 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 7

Conread position: 455-715
Cow position: chr9:28678162-28678424 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 59

Conread position: 457-660
Cow position: chr9:25484062-25484267 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 163
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 176, 57

Conread position: 457-662
Cow position: chr9:60651521-60651314 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 176, 57

Conread position: 457-713
Cow position: chr9:222335-222079 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 57

Conread position: 457-713
Cow position: chr9:1076006-1075748 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 57

Conread position: 457-713
Cow position: chr9:45873538-45873795 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 57

Conread position: 457-715
Cow position: chr9:780613-780353 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 57

Conread position: 457-715
Cow position: chr9:25035654-25035394 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 57

Conread position: 457-715
Cow position: chr9:30826873-30827131 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 56

Conread position: 465-686
Cow position: chr9:16268571-16268794 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 49

Conread position: 465-715
Cow position: chr9:31064632-31064884 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 49

Conread position: 465-715
Cow position: chr9:49177628-49177376 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 49

Show alignments to all cow chromosomes.