Cow genome map
| Conread name: | Ova1-OVRM10162G02 |
| Conread position: | 1-222 |
| Cow position: | chr10:23056217-23056447 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 29, 120 |
| Conread position: | 1-222 |
| Cow position: | chr10:28933603-28933382 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 42, 81 |
| Conread position: | 1-227 |
| Cow position: | chr10:11212977-11212743 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 29, 144 |
| Conread position: | 1-227 |
| Cow position: | chr10:63628065-63627851 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1-237 |
| Cow position: | chr10:35857193-35857437 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 29, 101 |
| Conread position: | 1-239 |
| Cow position: | chr10:56732898-56732662 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 133, 28 |
| Conread position: | 1-244 |
| Cow position: | chr10:64437786-64437547 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 122 |
| Conread position: | 1-251 |
| Cow position: | chr10:6505225-6504973 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 194 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 28, 168 |
| Conread position: | 1-251 |
| Cow position: | chr10:59675745-59676002 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-253 |
| Cow position: | chr10:23912635-23912902 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 200 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-254 |
| Cow position: | chr10:25689-25437 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 42, 168 |
| Conread position: | 1-254 |
| Cow position: | chr10:3115340-3115088 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 110, 19 |
| Conread position: | 1-254 |
| Cow position: | chr10:7304434-7304170 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 19, 124 |
| Conread position: | 1-254 |
| Cow position: | chr10:12315018-12314782 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-254 |
| Cow position: | chr10:51696604-51696349 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 152, 28 |
| Conread position: | 1-255 |
| Cow position: | chr10:40645795-40645544 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 28, 94 |
| Conread position: | 1-255 |
| Cow position: | chr10:53057797-53058054 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 28, 173 |
| Conread position: | 1-255 |
| Cow position: | chr10:59839423-59839673 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 43, 56 |
| Conread position: | 1-256 |
| Cow position: | chr10:1978798-1979055 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 29, 163 |
| Conread position: | 1-256 |
| Cow position: | chr10:6173220-6172948 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 19 |
| Conread position: | 1-256 |
| Cow position: | chr10:7366924-7367181 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 29, 112 |
| Conread position: | 1-256 |
| Cow position: | chr10:10148516-10148247 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 30, 93 |
| Conread position: | 1-256 |
| Cow position: | chr10:10720811-10721067 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 29, 158 |
| Conread position: | 1-256 |
| Cow position: | chr10:11275531-11275267 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-256 |
| Cow position: | chr10:20543386-20543136 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 52, 29 |
| Conread position: | 1-256 |
| Cow position: | chr10:23096917-23097160 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 232, 28 |
| Conread position: | 1-256 |
| Cow position: | chr10:24276871-24277147 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 29, 130 |
| Conread position: | 1-256 |
| Cow position: | chr10:24785966-24785712 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 198 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 28, 85 |
| Conread position: | 1-256 |
| Cow position: | chr10:24871750-24871488 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 29, 101 |
| Conread position: | 1-256 |
| Cow position: | chr10:41397339-41397085 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 19, 6 |
| Conread position: | 1-256 |
| Cow position: | chr10:42230522-42230274 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 49 |
| Conread position: | 1-256 |
| Cow position: | chr10:62516741-62516486 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 28, 157 |
| Conread position: | 1-281 |
| Cow position: | chr10:24763339-24763068 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 61, 28 |
| Conread position: | 1-296 |
| Cow position: | chr10:59664114-59664395 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 228 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 114, 55 |
| Conread position: | 1-343 |
| Cow position: | chr10:14975933-14976273 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 249 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 29, 60 |
| Conread position: | 2-256 |
| Cow position: | chr10:668742-668485 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 27, 111 |
| Conread position: | 3-248 |
| Cow position: | chr10:17844623-17844372 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 27, 64 |
| Conread position: | 3-256 |
| Cow position: | chr10:21709036-21709297 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 27, 110 |
| Conread position: | 4-254 |
| Cow position: | chr10:14909433-14909168 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 26, 74 |
| Conread position: | 5-230 |
| Cow position: | chr10:42123960-42124177 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 45 |
| Conread position: | 5-253 |
| Cow position: | chr10:1719664-1719916 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 25, 70 |
| Conread position: | 12-256 |
| Cow position: | chr10:6642731-6642482 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 31, 112 |
| Conread position: | 16-255 |
| Cow position: | chr10:40567808-40567566 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 14, 70 |
| Conread position: | 18-253 |
| Cow position: | chr10:1108552-1108797 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 108 |
| Conread position: | 30-242 |
| Cow position: | chr10:55097853-55098078 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 112, 72 |
| Conread position: | 34-255 |
| Cow position: | chr10:48098441-48098230 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 199, 106 |
| Conread position: | 35-255 |
| Cow position: | chr10:60237291-60237499 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 71-252 |
| Cow position: | chr10:63647188-63647369 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 162, 98 |
| Conread position: | 75-187 |
| Cow position: | chr10:22978109-22978221 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 76-252 |
| Cow position: | chr10:58199534-58199709 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 47, 65 |
| Conread position: | 89-256 |
| Cow position: | chr10:47650891-47650731 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 109-280 |
| Cow position: | chr10:55023101-55022931 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 123, 60 |
Show alignments to all cow chromosomes.