Cow genome map
| Conread name: | Ova1-OVRM10162G02 |
| Conread position: | 1-212 |
| Cow position: | chr15:34284156-34283947 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 32, 93 |
| Conread position: | 1-231 |
| Cow position: | chr15:40999865-40999630 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 29, 140 |
| Conread position: | 1-240 |
| Cow position: | chr15:24098356-24098109 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 18, 97 |
| Conread position: | 1-241 |
| Cow position: | chr15:26754899-26754665 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 119, 28 |
| Conread position: | 1-243 |
| Cow position: | chr15:42415462-42415701 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 59 |
| Conread position: | 1-248 |
| Cow position: | chr15:28177667-28177917 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 28, 101 |
| Conread position: | 1-253 |
| Cow position: | chr15:32287553-32287288 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 199 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 29, 60 |
| Conread position: | 1-255 |
| Cow position: | chr15:9062394-9062129 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-255 |
| Cow position: | chr15:25667019-25666768 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 193 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 28, 154 |
| Conread position: | 1-255 |
| Cow position: | chr15:32325524-32325767 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 28, 6 |
| Conread position: | 1-256 |
| Cow position: | chr15:4788767-4788513 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 23, 166 |
| Conread position: | 1-256 |
| Cow position: | chr15:5984388-5984135 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 154, 26 |
| Conread position: | 1-256 |
| Cow position: | chr15:7962281-7962532 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 28, 167 |
| Conread position: | 1-256 |
| Cow position: | chr15:11011401-11011133 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 28, 49 |
| Conread position: | 1-256 |
| Cow position: | chr15:13285240-13285490 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 35, 137 |
| Conread position: | 1-256 |
| Cow position: | chr15:14322859-14322599 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-256 |
| Cow position: | chr15:20309148-20309404 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 23, 127 |
| Conread position: | 1-256 |
| Cow position: | chr15:22168262-22168511 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 29, 165 |
| Conread position: | 1-256 |
| Cow position: | chr15:24044895-24044644 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 35, 164 |
| Conread position: | 1-256 |
| Cow position: | chr15:29004322-29004055 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 28, 175 |
| Conread position: | 1-256 |
| Cow position: | chr15:31085740-31085998 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-256 |
| Cow position: | chr15:38732432-38732161 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 26, 126 |
| Conread position: | 1-262 |
| Cow position: | chr15:3819333-3819609 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-275 |
| Cow position: | chr15:6530645-6530372 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 28, 133 |
| Conread position: | 1-283 |
| Cow position: | chr15:12359449-12359726 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 29, 120 |
| Conread position: | 3-256 |
| Cow position: | chr15:11957747-11957996 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 26, 100 |
| Conread position: | 3-261 |
| Cow position: | chr15:24994315-24994052 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 28, 49 |
| Conread position: | 4-221 |
| Cow position: | chr15:35838882-35838674 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 16, 68 |
| Conread position: | 5-236 |
| Cow position: | chr15:10487692-10487450 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 5-256 |
| Cow position: | chr15:20487005-20486759 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 218, 34 |
| Conread position: | 7-253 |
| Cow position: | chr15:34255537-34255298 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 19, 121 |
| Conread position: | 8-256 |
| Cow position: | chr15:47042430-47042177 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 22, 159 |
| Conread position: | 16-256 |
| Cow position: | chr15:24797589-24797355 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 27, 13 |
| Conread position: | 25-210 |
| Cow position: | chr15:26734841-26735016 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 31-256 |
| Cow position: | chr15:6905778-6906000 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 94, 110 |
| Conread position: | 33-228 |
| Cow position: | chr15:30820593-30820405 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 43-303 |
| Cow position: | chr15:12440461-12440209 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 187, 67 |
| Conread position: | 70-239 |
| Cow position: | chr15:38876411-38876243 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 140, 67 |
Show alignments to all cow chromosomes.