Cow genome map
| Conread name: | Ova1-OVRM10162G02 |
| Conread position: | 1-210 |
| Cow position: | chr17:33534534-33534748 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 29, 112 |
| Conread position: | 1-212 |
| Cow position: | chr17:7760538-7760743 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 168 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 32, 140 |
| Conread position: | 1-215 |
| Cow position: | chr17:21312884-21313091 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 170 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-223 |
| Cow position: | chr17:25707885-25707661 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 28, 162 |
| Conread position: | 1-241 |
| Cow position: | chr17:7559741-7559981 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 28, 169 |
| Conread position: | 1-243 |
| Cow position: | chr17:24608779-24608518 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 29, 94 |
| Conread position: | 1-244 |
| Cow position: | chr17:17406065-17405816 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 46, 189 |
| Conread position: | 1-248 |
| Cow position: | chr17:31798744-31798493 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 28, 171 |
| Conread position: | 1-253 |
| Cow position: | chr17:29074409-29074656 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 33, 147 |
| Conread position: | 1-254 |
| Cow position: | chr17:20815302-20815042 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-254 |
| Cow position: | chr17:28359771-28359517 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 29, 90 |
| Conread position: | 1-255 |
| Cow position: | chr17:33933822-33934063 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 229, 27 |
| Conread position: | 1-255 |
| Cow position: | chr17:34316779-34317034 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 29, 126 |
| Conread position: | 1-256 |
| Cow position: | chr17:5745324-5745578 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 48 |
| Conread position: | 1-256 |
| Cow position: | chr17:5767841-5767583 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 171 |
| Conread position: | 1-256 |
| Cow position: | chr17:8690516-8690769 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 72 |
| Conread position: | 1-256 |
| Cow position: | chr17:18815145-18814888 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 144, 28 |
| Conread position: | 1-256 |
| Cow position: | chr17:34628555-34628803 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 28, 62 |
| Conread position: | 1-270 |
| Cow position: | chr17:5246821-5246553 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 201 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 29, 122 |
| Conread position: | 1-275 |
| Cow position: | chr17:20208895-20209170 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 25, 60 |
| Conread position: | 1-280 |
| Cow position: | chr17:31232005-31232281 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 29, 172 |
| Conread position: | 1-293 |
| Cow position: | chr17:3471346-3471061 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 29, 64 |
| Conread position: | 2-257 |
| Cow position: | chr17:36221488-36221241 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 76, 13 |
| Conread position: | 5-222 |
| Cow position: | chr17:15376244-15376020 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 16-291 |
| Cow position: | chr17:39790596-39790332 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 217, 14 |
| Conread position: | 17-243 |
| Cow position: | chr17:11832231-11832465 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 182 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 13, 98 |
| Conread position: | 25-256 |
| Cow position: | chr17:24294069-24293834 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 178 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 18, 50 |
| Conread position: | 33-256 |
| Cow position: | chr17:4064292-4064059 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 37-255 |
| Cow position: | chr17:17240067-17240282 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 143, 8 |
| Conread position: | 70-255 |
| Cow position: | chr17:9900997-9900811 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 100, 76 |
Show alignments to all cow chromosomes.