Cow genome map
| Conread name: | Ova1-OVRM10162G02 |
| Conread position: | 1-230 |
| Cow position: | chr2:7533881-7534110 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 29, 148 |
| Conread position: | 1-234 |
| Cow position: | chr2:53501376-53501612 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 150, 22 |
| Conread position: | 1-236 |
| Cow position: | chr2:39068192-39067949 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 28, 117 |
| Conread position: | 1-238 |
| Cow position: | chr2:80177877-80178126 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-239 |
| Cow position: | chr2:36105153-36104915 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 149, 126 |
| Conread position: | 1-240 |
| Cow position: | chr2:34256410-34256655 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 28, 79 |
| Conread position: | 1-241 |
| Cow position: | chr2:80074-80321 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 41, 100 |
| Conread position: | 1-243 |
| Cow position: | chr2:24669046-24668805 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 29, 151 |
| Conread position: | 1-248 |
| Cow position: | chr2:17444680-17444429 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 159 |
| Conread position: | 1-248 |
| Cow position: | chr2:45469893-45469648 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 33, 206 |
| Conread position: | 1-248 |
| Cow position: | chr2:72758519-72758259 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 26, 152 |
| Conread position: | 1-251 |
| Cow position: | chr2:19494096-19493851 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 50, 30 |
| Conread position: | 1-252 |
| Cow position: | chr2:44167961-44167712 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 23, 56 |
| Conread position: | 1-253 |
| Cow position: | chr2:14710222-14710476 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 140 |
| Conread position: | 1-254 |
| Cow position: | chr2:6720746-6720474 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 202 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1-255 |
| Cow position: | chr2:777806-778050 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 29, 107 |
| Conread position: | 1-255 |
| Cow position: | chr2:42183254-42182996 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 108 |
| Conread position: | 1-255 |
| Cow position: | chr2:47361632-47361877 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 28, 115 |
| Conread position: | 1-255 |
| Cow position: | chr2:79403986-79403740 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 29, 108 |
| Conread position: | 1-256 |
| Cow position: | chr2:1849924-1849663 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 21, 173 |
| Conread position: | 1-256 |
| Cow position: | chr2:10691543-10691790 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 31, 39 |
| Conread position: | 1-256 |
| Cow position: | chr2:17341459-17341216 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 29, 71 |
| Conread position: | 1-256 |
| Cow position: | chr2:23014595-23014847 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 28, 51 |
| Conread position: | 1-256 |
| Cow position: | chr2:23271048-23271287 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 232, 38 |
| Conread position: | 1-256 |
| Cow position: | chr2:26339934-26340186 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 150, 46 |
| Conread position: | 1-256 |
| Cow position: | chr2:32264507-32264761 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 29, 155 |
| Conread position: | 1-256 |
| Cow position: | chr2:32416969-32417228 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 94 |
| Conread position: | 1-256 |
| Cow position: | chr2:38376780-38376529 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 28, 143 |
| Conread position: | 1-256 |
| Cow position: | chr2:70752682-70752419 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 28, 147 |
| Conread position: | 1-256 |
| Cow position: | chr2:76340773-76341024 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 196 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 28, 142 |
| Conread position: | 1-265 |
| Cow position: | chr2:53000397-53000137 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 200 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 28, 124 |
| Conread position: | 1-268 |
| Cow position: | chr2:70746683-70746408 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 29, 80 |
| Conread position: | 1-277 |
| Cow position: | chr2:29802226-29802513 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 215 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 50, 26 |
| Conread position: | 1-279 |
| Cow position: | chr2:549442-549697 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 29, 45 |
| Conread position: | 1-296 |
| Cow position: | chr2:85281229-85281532 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 217 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 34, 17 |
| Conread position: | 2-230 |
| Cow position: | chr2:42733653-42733431 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 5 |
| Conread position: | 2-254 |
| Cow position: | chr2:53497005-53497254 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 13, 28 |
| Conread position: | 2-255 |
| Cow position: | chr2:27337892-27338139 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 36, 56 |
| Conread position: | 2-256 |
| Cow position: | chr2:34643318-34643069 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 194 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 31, 141 |
| Conread position: | 2-256 |
| Cow position: | chr2:54790167-54789916 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 28, 125 |
| Conread position: | 2-293 |
| Cow position: | chr2:27178541-27178257 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 28, 71 |
| Conread position: | 3-296 |
| Cow position: | chr2:70656839-70656535 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 27, 67 |
| Conread position: | 4-256 |
| Cow position: | chr2:69223351-69223587 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 29, 103 |
| Conread position: | 5-252 |
| Cow position: | chr2:39117460-39117214 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 24, 97 |
| Conread position: | 7-256 |
| Cow position: | chr2:41897344-41897090 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 22, 166 |
| Conread position: | 7-256 |
| Cow position: | chr2:52485097-52485346 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 23, 120 |
| Conread position: | 10-283 |
| Cow position: | chr2:35948790-35949065 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 19, 141 |
| Conread position: | 29-256 |
| Cow position: | chr2:12237384-12237620 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 32-256 |
| Cow position: | chr2:29607379-29607603 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 138, 7 |
| Conread position: | 43-236 |
| Cow position: | chr2:14846817-14846620 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 126, 63 |
| Conread position: | 45-256 |
| Cow position: | chr2:50790286-50790083 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 188, 21 |
| Conread position: | 61-256 |
| Cow position: | chr2:56737523-56737715 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 79, 45 |
| Conread position: | 87-254 |
| Cow position: | chr2:36397746-36397574 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 139-278 |
| Cow position: | chr2:54882923-54882786 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 94, 75 |
Show alignments to all cow chromosomes.