Cow genome map
| Conread name: | Ova1-OVRM10162G02 |
| Conread position: | 1-212 |
| Cow position: | chr21:13256754-13256545 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 28, 142 |
| Conread position: | 1-216 |
| Cow position: | chr21:24759021-24758789 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 28, 21 |
| Conread position: | 1-229 |
| Cow position: | chr21:36819264-36819489 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 29, 91 |
| Conread position: | 1-231 |
| Cow position: | chr21:5418810-5418581 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 28, 99 |
| Conread position: | 1-243 |
| Cow position: | chr21:30607147-30607385 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 191 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 175, 27 |
| Conread position: | 1-248 |
| Cow position: | chr21:9710756-9711002 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 32, 138 |
| Conread position: | 1-248 |
| Cow position: | chr21:45436476-45436721 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 170, 46 |
| Conread position: | 1-251 |
| Cow position: | chr21:11645021-11645275 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1-255 |
| Cow position: | chr21:12960950-12961206 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 32, 115 |
| Conread position: | 1-255 |
| Cow position: | chr21:28442695-28442440 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 24, 143 |
| Conread position: | 1-255 |
| Cow position: | chr21:35062041-35061774 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-256 |
| Cow position: | chr21:2785827-2786087 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 29, 115 |
| Conread position: | 1-256 |
| Cow position: | chr21:16910010-16909760 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 23, 114 |
| Conread position: | 1-256 |
| Cow position: | chr21:20910145-20910406 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 28, 38 |
| Conread position: | 1-256 |
| Cow position: | chr21:21000081-21000345 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 199 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 61, 28 |
| Conread position: | 1-256 |
| Cow position: | chr21:23586829-23586568 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 196 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 29, 174 |
| Conread position: | 1-256 |
| Cow position: | chr21:24698439-24698187 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 24, 143 |
| Conread position: | 1-256 |
| Cow position: | chr21:25382962-25382703 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 42, 88 |
| Conread position: | 1-256 |
| Cow position: | chr21:28211150-28210890 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 25, 116 |
| Conread position: | 1-256 |
| Cow position: | chr21:37706466-37706712 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 232, 55 |
| Conread position: | 1-256 |
| Cow position: | chr21:44515212-44514970 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 232, 28 |
| Conread position: | 1-271 |
| Cow position: | chr21:18850279-18850538 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 232, 18 |
| Conread position: | 2-255 |
| Cow position: | chr21:4276640-4276900 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 27, 228 |
| Conread position: | 3-256 |
| Cow position: | chr21:3047630-3047369 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 110 |
| Conread position: | 7-256 |
| Cow position: | chr21:38121044-38120808 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 226, 21 |
| Conread position: | 10-239 |
| Cow position: | chr21:8546268-8546495 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 19, 114 |
| Conread position: | 33-242 |
| Cow position: | chr21:10882348-10882145 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 200, 107 |
| Conread position: | 33-256 |
| Cow position: | chr21:44074380-44074157 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 112, 197 |
| Conread position: | 70-252 |
| Cow position: | chr21:27712555-27712727 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 160, 76 |
| Conread position: | 125-255 |
| Cow position: | chr21:44861414-44861549 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 139-275 |
| Cow position: | chr21:10046060-10045923 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 31, 84 |
| Conread position: | 168-298 |
| Cow position: | chr21:33933590-33933720 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 65, 91 |
Show alignments to all cow chromosomes.