Cow genome map
| Conread name: | Ova1-OVRM10162G02 |
| Conread position: | 1-181 |
| Cow position: | chr28:15498323-15498510 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-215 |
| Cow position: | chr28:5931243-5931036 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 37, 31 |
| Conread position: | 1-222 |
| Cow position: | chr28:5366237-5366463 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 181 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 29, 108 |
| Conread position: | 1-222 |
| Cow position: | chr28:11827381-11827168 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 1-234 |
| Cow position: | chr28:33698013-33697783 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 78 |
| Conread position: | 1-241 |
| Cow position: | chr28:19133678-19133423 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-251 |
| Cow position: | chr28:19358315-19358562 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 24, 68 |
| Conread position: | 1-252 |
| Cow position: | chr28:4070860-4070616 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 29, 123 |
| Conread position: | 1-252 |
| Cow position: | chr28:4587990-4587747 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 32, 82 |
| Conread position: | 1-254 |
| Cow position: | chr28:10745100-10744854 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 29, 142 |
| Conread position: | 1-254 |
| Cow position: | chr28:21873661-21873397 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 200 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 1-255 |
| Cow position: | chr28:20265280-20265024 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 28, 11 |
| Conread position: | 1-255 |
| Cow position: | chr28:25315088-25314829 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-255 |
| Cow position: | chr28:26701429-26701672 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 28, 44 |
| Conread position: | 1-255 |
| Cow position: | chr28:29073861-29074122 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 28, 67 |
| Conread position: | 1-256 |
| Cow position: | chr28:3024021-3024262 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 29, 110 |
| Conread position: | 1-256 |
| Cow position: | chr28:3769771-3770023 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 35, 65 |
| Conread position: | 1-256 |
| Cow position: | chr28:7746238-7745983 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 146 |
| Conread position: | 1-256 |
| Cow position: | chr28:10681931-10682175 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 32, 43 |
| Conread position: | 1-256 |
| Cow position: | chr28:11451573-11451828 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 29, 157 |
| Conread position: | 1-256 |
| Cow position: | chr28:17355970-17356238 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 35, 15 |
| Conread position: | 1-256 |
| Cow position: | chr28:19079954-19080224 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-256 |
| Cow position: | chr28:23793412-23793672 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 115 |
| Conread position: | 1-256 |
| Cow position: | chr28:25399771-25399537 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 232, 29 |
| Conread position: | 1-257 |
| Cow position: | chr28:662001-661760 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 232, 55 |
| Conread position: | 1-257 |
| Cow position: | chr28:28590629-28590378 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 29, 116 |
| Conread position: | 1-278 |
| Cow position: | chr28:32300469-32300739 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 26, 139 |
| Conread position: | 1-313 |
| Cow position: | chr28:26719241-26718922 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 128, 27 |
| Conread position: | 2-255 |
| Cow position: | chr28:12048810-12049065 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 28, 121 |
| Conread position: | 3-239 |
| Cow position: | chr28:10514203-10514440 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 150 |
| Conread position: | 41-255 |
| Cow position: | chr28:19961757-19961537 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 130, 36 |
| Conread position: | 72-256 |
| Cow position: | chr28:32824180-32824006 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 161, 67 |
| Conread position: | 76-234 |
| Cow position: | chr28:21569977-21569826 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 83-256 |
| Cow position: | chr28:14721013-14721192 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 58, 0 |
Show alignments to all cow chromosomes.