Cow genome map
| Conread name: | Ova1-OVRM10162G02 |
| Conread position: | 1-222 |
| Cow position: | chr29:20178242-20178455 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 1-243 |
| Cow position: | chr29:27123461-27123700 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 28, 39 |
| Conread position: | 1-248 |
| Cow position: | chr29:22175571-22175321 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 55, 11 |
| Conread position: | 1-248 |
| Cow position: | chr29:30812634-30812378 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-251 |
| Cow position: | chr29:21933231-21933481 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 32, 184 |
| Conread position: | 1-254 |
| Cow position: | chr29:12956426-12956678 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 28, 90 |
| Conread position: | 1-254 |
| Cow position: | chr29:32655539-32655798 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 28, 13 |
| Conread position: | 1-256 |
| Cow position: | chr29:94670-94927 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 139, 26 |
| Conread position: | 1-256 |
| Cow position: | chr29:650162-649908 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 28, 144 |
| Conread position: | 1-256 |
| Cow position: | chr29:2188456-2188709 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 192 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 29, 43 |
| Conread position: | 1-256 |
| Cow position: | chr29:7051842-7051574 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 28, 128 |
| Conread position: | 1-256 |
| Cow position: | chr29:17131729-17131977 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 176, 20 |
| Conread position: | 1-256 |
| Cow position: | chr29:23155138-23154866 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 29, 159 |
| Conread position: | 1-256 |
| Cow position: | chr29:25088637-25088375 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-278 |
| Cow position: | chr29:23568989-23569260 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 28, 73 |
| Conread position: | 1-281 |
| Cow position: | chr29:26615838-26616120 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 2-215 |
| Cow position: | chr29:32521755-32521545 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 27, 125 |
| Conread position: | 2-254 |
| Cow position: | chr29:23874339-23874099 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 10 |
| Conread position: | 3-243 |
| Cow position: | chr29:2589011-2589246 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 27, 70 |
| Conread position: | 3-254 |
| Cow position: | chr29:2366896-2367161 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 4-256 |
| Cow position: | chr29:32963439-32963180 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 25, 150 |
| Conread position: | 5-190 |
| Cow position: | chr29:5793487-5793309 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 24, 46 |
| Conread position: | 8-251 |
| Cow position: | chr29:24578757-24578497 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 8-256 |
| Cow position: | chr29:18521149-18521405 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 26, 86 |
| Conread position: | 14-256 |
| Cow position: | chr29:19338854-19338600 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 28-210 |
| Cow position: | chr29:11634679-11634487 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 15, 42 |
| Conread position: | 33-256 |
| Cow position: | chr29:41182866-41183099 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 37-256 |
| Cow position: | chr29:37785334-37785546 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 196, 110 |
| Conread position: | 37-256 |
| Cow position: | chr29:41076183-41076422 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 70-278 |
| Cow position: | chr29:13028269-13028055 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 62, 196 |
| Conread position: | 109-273 |
| Cow position: | chr29:10153988-10154158 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 156 |
| Conread position: | 139-256 |
| Cow position: | chr29:41530565-41530447 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 91, 0 |
Show alignments to all cow chromosomes.