Cow genome map
| Conread name: | Ova1-OVRM10162G02 |
| Conread position: | 1-210 |
| Cow position: | chr4:3837161-3836940 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-216 |
| Cow position: | chr4:63349599-63349825 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 179 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 113, 85 |
| Conread position: | 1-222 |
| Cow position: | chr4:56239972-56240177 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-229 |
| Cow position: | chr4:5623320-5623542 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 28, 58 |
| Conread position: | 1-236 |
| Cow position: | chr4:48485882-48485647 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 28, 112 |
| Conread position: | 1-239 |
| Cow position: | chr4:60041417-60041655 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 86, 18 |
| Conread position: | 1-243 |
| Cow position: | chr4:21064914-21064680 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 29, 14 |
| Conread position: | 1-243 |
| Cow position: | chr4:60772077-60771846 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 232, 14 |
| Conread position: | 1-248 |
| Cow position: | chr4:12589436-12589190 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 21, 134 |
| Conread position: | 1-248 |
| Cow position: | chr4:29710156-29710400 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 25, 148 |
| Conread position: | 1-248 |
| Cow position: | chr4:52225891-52225629 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 20, 237 |
| Conread position: | 1-252 |
| Cow position: | chr4:20139647-20139890 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 40, 14 |
| Conread position: | 1-252 |
| Cow position: | chr4:45114728-45114988 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-253 |
| Cow position: | chr4:8947271-8947035 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 232, 28 |
| Conread position: | 1-253 |
| Cow position: | chr4:13832726-13832983 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 94, 55 |
| Conread position: | 1-253 |
| Cow position: | chr4:18489510-18489755 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 30, 158 |
| Conread position: | 1-254 |
| Cow position: | chr4:11922559-11922810 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 23, 13 |
| Conread position: | 1-254 |
| Cow position: | chr4:34383469-34383714 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 232, 28 |
| Conread position: | 1-255 |
| Cow position: | chr4:27548343-27548597 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 30, 14 |
| Conread position: | 1-255 |
| Cow position: | chr4:44586302-44586555 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 164, 36 |
| Conread position: | 1-256 |
| Cow position: | chr4:12560908-12560661 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 146, 28 |
| Conread position: | 1-256 |
| Cow position: | chr4:12700465-12700721 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 147 |
| Conread position: | 1-256 |
| Cow position: | chr4:24187736-24188003 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 28, 234 |
| Conread position: | 1-256 |
| Cow position: | chr4:36755628-36755357 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 1-256 |
| Cow position: | chr4:44956308-44956569 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 23, 126 |
| Conread position: | 1-256 |
| Cow position: | chr4:46258363-46258115 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 195 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 14, 159 |
| Conread position: | 1-256 |
| Cow position: | chr4:48499717-48499466 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 168, 28 |
| Conread position: | 1-261 |
| Cow position: | chr4:21588723-21588978 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 26, 150 |
| Conread position: | 1-261 |
| Cow position: | chr4:29805492-29805752 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 133, 28 |
| Conread position: | 1-271 |
| Cow position: | chr4:58687555-58687845 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-280 |
| Cow position: | chr4:23526572-23526302 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 12, 31 |
| Conread position: | 1-290 |
| Cow position: | chr4:58512686-58512977 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 24, 82 |
| Conread position: | 1-293 |
| Cow position: | chr4:21844960-21844671 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 169, 50 |
| Conread position: | 1-293 |
| Cow position: | chr4:52748580-52748873 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 29, 234 |
| Conread position: | 3-283 |
| Cow position: | chr4:21371266-21370986 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 33, 25 |
| Conread position: | 3-293 |
| Cow position: | chr4:3388420-3388144 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 27, 106 |
| Conread position: | 5-254 |
| Cow position: | chr4:53999636-53999884 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 165, 120 |
| Conread position: | 8-256 |
| Cow position: | chr4:10041908-10041663 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 25, 115 |
| Conread position: | 10-243 |
| Cow position: | chr4:59118273-59118507 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 79 |
| Conread position: | 23-283 |
| Cow position: | chr4:46456198-46456464 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 205 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 145, 14 |
| Conread position: | 29-293 |
| Cow position: | chr4:34043902-34044184 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 14, 95 |
| Conread position: | 40-256 |
| Cow position: | chr4:66918737-66918530 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 193, 110 |
| Conread position: | 139-254 |
| Cow position: | chr4:24686183-24686300 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 84 |
| Conread position: | 139-255 |
| Cow position: | chr4:3251849-3251967 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 139-256 |
| Cow position: | chr4:4127384-4127265 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 139-256 |
| Cow position: | chr4:27287393-27287512 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 153-325 |
| Cow position: | chr4:51866638-51866463 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 17, 128 |
Show alignments to all cow chromosomes.