Cow genome map
| Conread name: | Ova1-OVRM10162G02 |
| Conread position: | 1-212 |
| Cow position: | chr6:50746909-50746703 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 28, 89 |
| Conread position: | 1-230 |
| Cow position: | chr6:3374644-3374883 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 28, 96 |
| Conread position: | 1-231 |
| Cow position: | chr6:40137137-40137378 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 28, 6 |
| Conread position: | 1-235 |
| Cow position: | chr6:60057731-60057962 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 29, 110 |
| Conread position: | 1-247 |
| Cow position: | chr6:5609515-5609768 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 32, 181 |
| Conread position: | 1-248 |
| Cow position: | chr6:58594179-58594422 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 155 |
| Conread position: | 1-249 |
| Cow position: | chr6:19401781-19401529 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 32, 48 |
| Conread position: | 1-252 |
| Cow position: | chr6:3017376-3017124 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 28, 116 |
| Conread position: | 1-254 |
| Cow position: | chr6:40774427-40774687 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 160, 44 |
| Conread position: | 1-255 |
| Cow position: | chr6:50984150-50983865 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1-255 |
| Cow position: | chr6:67304730-67304463 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 32, 126 |
| Conread position: | 1-256 |
| Cow position: | chr6:10106066-10106319 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 18, 145 |
| Conread position: | 1-256 |
| Cow position: | chr6:10332168-10332425 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 29, 17 |
| Conread position: | 1-256 |
| Cow position: | chr6:12845235-12844991 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 29, 57 |
| Conread position: | 1-256 |
| Cow position: | chr6:22969006-22968739 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 28, 180 |
| Conread position: | 1-256 |
| Cow position: | chr6:30826107-30826371 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 29, 73 |
| Conread position: | 1-256 |
| Cow position: | chr6:44511170-44510916 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 23, 166 |
| Conread position: | 1-289 |
| Cow position: | chr6:10254166-10253866 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 31, 103 |
| Conread position: | 1-293 |
| Cow position: | chr6:15937926-15938217 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 49, 94 |
| Conread position: | 1-293 |
| Cow position: | chr6:35613489-35613780 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 111 |
| Conread position: | 2-212 |
| Cow position: | chr6:18977551-18977341 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 27, 170 |
| Conread position: | 2-227 |
| Cow position: | chr6:38218595-38218376 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 27, 10 |
| Conread position: | 2-254 |
| Cow position: | chr6:67968686-67968948 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 27, 176 |
| Conread position: | 2-256 |
| Cow position: | chr6:10695795-10695541 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 28, 102 |
| Conread position: | 2-270 |
| Cow position: | chr6:44078442-44078183 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 203 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 230, 118 |
| Conread position: | 3-273 |
| Cow position: | chr6:11465963-11466252 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 5-251 |
| Cow position: | chr6:60781525-60781773 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 21, 113 |
| Conread position: | 5-252 |
| Cow position: | chr6:6117629-6117871 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 189 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 15-256 |
| Cow position: | chr6:49685496-49685240 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 32-252 |
| Cow position: | chr6:52478532-52478757 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 14, 145 |
| Conread position: | 39-255 |
| Cow position: | chr6:6067793-6068006 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 194, 101 |
| Conread position: | 61-256 |
| Cow position: | chr6:39995236-39995427 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 68, 53 |
| Conread position: | 68-285 |
| Cow position: | chr6:33949141-33949347 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 72 |
| Conread position: | 91-256 |
| Cow position: | chr6:24583382-24583554 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 81, 133 |
| Conread position: | 122-256 |
| Cow position: | chr6:56860090-56859948 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 52, 109 |
| Conread position: | 139-256 |
| Cow position: | chr6:66874128-66874009 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
Show alignments to all cow chromosomes.