Cow genome map
| Conread name: | Ova1-OVRM10162G02 |
| Conread position: | 1-203 |
| Cow position: | chr9:26279033-26278824 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 28, 146 |
| Conread position: | 1-222 |
| Cow position: | chr9:24850383-24850622 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 27, 111 |
| Conread position: | 1-240 |
| Cow position: | chr9:41789427-41789659 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 32, 48 |
| Conread position: | 1-248 |
| Cow position: | chr9:7327726-7327475 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 178 |
| Conread position: | 1-248 |
| Cow position: | chr9:24904620-24904867 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 187 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 28, 164 |
| Conread position: | 1-248 |
| Cow position: | chr9:41317823-41317575 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 29, 124 |
| Conread position: | 1-254 |
| Cow position: | chr9:54206187-54205942 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 35, 141 |
| Conread position: | 1-255 |
| Cow position: | chr9:48118553-48118289 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 29, 57 |
| Conread position: | 1-256 |
| Cow position: | chr9:8600477-8600743 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 26, 154 |
| Conread position: | 1-256 |
| Cow position: | chr9:9558118-9558368 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 21, 41 |
| Conread position: | 1-256 |
| Cow position: | chr9:21674846-21674589 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 29, 121 |
| Conread position: | 1-256 |
| Cow position: | chr9:23027942-23028188 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 28, 51 |
| Conread position: | 1-256 |
| Cow position: | chr9:27085602-27085851 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 14 |
| Conread position: | 1-256 |
| Cow position: | chr9:30138272-30138531 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 120 |
| Conread position: | 1-256 |
| Cow position: | chr9:34093286-34093023 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 25, 120 |
| Conread position: | 1-256 |
| Cow position: | chr9:38033001-38032749 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 61, 27 |
| Conread position: | 1-256 |
| Cow position: | chr9:40060187-40059916 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-270 |
| Cow position: | chr9:16300422-16300165 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 32, 51 |
| Conread position: | 1-278 |
| Cow position: | chr9:8599744-8600046 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 78 |
| Conread position: | 1-281 |
| Cow position: | chr9:6089242-6089514 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 28, 58 |
| Conread position: | 1-304 |
| Cow position: | chr9:42998323-42998028 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 29, 70 |
| Conread position: | 2-254 |
| Cow position: | chr9:30440462-30440212 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 25, 98 |
| Conread position: | 2-255 |
| Cow position: | chr9:8338171-8338437 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 2-256 |
| Cow position: | chr9:4858687-4858926 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 19, 50 |
| Conread position: | 3-212 |
| Cow position: | chr9:51928843-51929065 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 26, 116 |
| Conread position: | 3-256 |
| Cow position: | chr9:47906134-47905892 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 230, 26 |
| Conread position: | 3-257 |
| Cow position: | chr9:42445833-42445584 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 230, 106 |
| Conread position: | 5-222 |
| Cow position: | chr9:3582796-3582567 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 27, 111 |
| Conread position: | 5-256 |
| Cow position: | chr9:7363173-7363423 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 26, 123 |
| Conread position: | 5-256 |
| Cow position: | chr9:9443449-9443205 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 25, 118 |
| Conread position: | 7-254 |
| Cow position: | chr9:50691435-50691183 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 17, 155 |
| Conread position: | 10-256 |
| Cow position: | chr9:8636805-8637044 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 20, 96 |
| Conread position: | 16-256 |
| Cow position: | chr9:55365051-55365298 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 123, 212 |
| Conread position: | 22-256 |
| Cow position: | chr9:34523392-34523610 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 25-255 |
| Cow position: | chr9:33668882-33669108 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 177 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 85, 16 |
| Conread position: | 31-256 |
| Cow position: | chr9:20579441-20579207 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 77, 17 |
| Conread position: | 31-256 |
| Cow position: | chr9:35203061-35203289 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 200, 0 |
| Conread position: | 33-256 |
| Cow position: | chr9:50659262-50659038 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 200, 0 |
| Conread position: | 33-271 |
| Cow position: | chr9:36383471-36383703 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 194, 121 |
| Conread position: | 34-270 |
| Cow position: | chr9:64105145-64105389 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 37-256 |
| Cow position: | chr9:49292916-49292702 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 196, 38 |
| Conread position: | 43-231 |
| Cow position: | chr9:33697467-33697279 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 54-256 |
| Cow position: | chr9:20109708-20109912 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 81-256 |
| Cow position: | chr9:38546624-38546789 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 152, 41 |
| Conread position: | 109-243 |
| Cow position: | chr9:25502164-25502032 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 124, 59 |
Show alignments to all cow chromosomes.