Cow genome map
| Conread name: | Ova1-OVRM10163B02 |
| Conread position: | 301-471 |
| Cow position: | chr11:72346985-72347159 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 312-564 |
| Cow position: | chr11:67966862-67967108 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 162, 74 |
| Conread position: | 312-573 |
| Cow position: | chr11:37330140-37329882 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 221, 0 |
| Conread position: | 326-564 |
| Cow position: | chr11:881503-881736 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 329-574 |
| Cow position: | chr11:39234756-39234515 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 0 |
| Conread position: | 331-444 |
| Cow position: | chr11:39241414-39241301 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 331-452 |
| Cow position: | chr11:39204221-39204100 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 6, 79 |
| Conread position: | 331-465 |
| Cow position: | chr11:32391104-32390972 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 331-563 |
| Cow position: | chr11:67774731-67774513 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 331-564 |
| Cow position: | chr11:37356204-37356434 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 176 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 74, 164 |
| Conread position: | 331-565 |
| Cow position: | chr11:31888447-31888211 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 53, 85 |
| Conread position: | 331-576 |
| Cow position: | chr11:18167382-18167619 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 237, 63 |
| Conread position: | 332-421 |
| Cow position: | chr11:63664986-63664897 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 78 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 332-487 |
| Cow position: | chr11:36258841-36258988 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 332-514 |
| Cow position: | chr11:7050163-7050343 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 73, 55 |
| Conread position: | 332-524 |
| Cow position: | chr11:63678387-63678200 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 332-534 |
| Cow position: | chr11:37125236-37125435 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 332-563 |
| Cow position: | chr11:51842318-51842539 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 179, 47 |
| Conread position: | 332-564 |
| Cow position: | chr11:5144370-5144600 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 32 |
| Conread position: | 332-564 |
| Cow position: | chr11:36901345-36901580 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 19 |
| Conread position: | 332-565 |
| Cow position: | chr11:11682894-11682659 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 61, 46 |
| Conread position: | 332-577 |
| Cow position: | chr11:39242998-39242758 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 332-578 |
| Cow position: | chr11:20423460-20423218 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 222, 139 |
| Conread position: | 332-583 |
| Cow position: | chr11:6604931-6604682 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 34 |
| Conread position: | 335-563 |
| Cow position: | chr11:19703347-19703119 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 98 |
| Conread position: | 335-572 |
| Cow position: | chr11:9806428-9806657 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 50, 121 |
| Conread position: | 335-572 |
| Cow position: | chr11:41483271-41483498 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 338-569 |
| Cow position: | chr11:8097860-8098089 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 165, 38 |
| Conread position: | 338-573 |
| Cow position: | chr11:85953440-85953222 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 340-572 |
| Cow position: | chr11:37398904-37399127 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 103, 82 |
| Conread position: | 349-566 |
| Cow position: | chr11:4127469-4127257 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 149, 16 |
| Conread position: | 379-564 |
| Cow position: | chr11:5252405-5252590 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 155 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 379-565 |
| Cow position: | chr11:5187621-5187436 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 148 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 380-547 |
| Cow position: | chr11:68403705-68403864 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 402-563 |
| Cow position: | chr11:39530668-39530510 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 103, 121 |
| Conread position: | 414-573 |
| Cow position: | chr11:63664628-63664474 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
Show alignments to all cow chromosomes.