Cow genome map
| Conread name: | Ova1-OVRM10163B02 |
| Conread position: | 302-564 |
| Cow position: | chr16:3892108-3891863 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 93, 19 |
| Conread position: | 326-563 |
| Cow position: | chr16:19262177-19262411 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 22, 65 |
| Conread position: | 326-572 |
| Cow position: | chr16:20985004-20984754 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 328-576 |
| Cow position: | chr16:7770394-7770153 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 188 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 180, 51 |
| Conread position: | 331-557 |
| Cow position: | chr16:37842304-37842090 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 174, 46 |
| Conread position: | 332-495 |
| Cow position: | chr16:33709757-33709597 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 332-524 |
| Cow position: | chr16:27974620-27974813 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 40, 19 |
| Conread position: | 332-563 |
| Cow position: | chr16:22240353-22240132 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 180, 47 |
| Conread position: | 332-563 |
| Cow position: | chr16:43162652-43162871 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 172, 47 |
| Conread position: | 332-565 |
| Cow position: | chr16:200457-200229 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 332-565 |
| Cow position: | chr16:1632670-1632441 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 332-565 |
| Cow position: | chr16:35411981-35412209 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 16, 59 |
| Conread position: | 332-572 |
| Cow position: | chr16:50545634-50545870 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 44, 55 |
| Conread position: | 332-578 |
| Cow position: | chr16:26065660-26065414 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 244 |
| Conread position: | 332-579 |
| Cow position: | chr16:8786712-8786958 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 335-559 |
| Cow position: | chr16:33147779-33147561 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 335-572 |
| Cow position: | chr16:34131422-34131653 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 30 |
| Conread position: | 336-473 |
| Cow position: | chr16:3854318-3854454 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 337-564 |
| Cow position: | chr16:10250772-10250542 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 12, 186 |
| Conread position: | 337-564 |
| Cow position: | chr16:23495697-23495931 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 184 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 55, 83 |
| Conread position: | 338-573 |
| Cow position: | chr16:56224035-56223805 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 38, 105 |
| Conread position: | 339-492 |
| Cow position: | chr16:23384549-23384394 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 76, 32 |
| Conread position: | 345-565 |
| Cow position: | chr16:49726377-49726155 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 47, 72 |
| Conread position: | 356-601 |
| Cow position: | chr16:10444355-10444099 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 26, 190 |
| Conread position: | 366-561 |
| Cow position: | chr16:43196442-43196253 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 378-565 |
| Cow position: | chr16:27159513-27159700 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 77, 27 |
| Conread position: | 379-580 |
| Cow position: | chr16:46377261-46377450 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 382-572 |
| Cow position: | chr16:54409359-54409174 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 45, 36 |
| Conread position: | 383-555 |
| Cow position: | chr16:46545348-46545516 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 115 |
| Conread position: | 390-563 |
| Cow position: | chr16:22245544-22245374 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 122, 23 |
| Conread position: | 396-577 |
| Cow position: | chr16:36430007-36429835 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 399-572 |
| Cow position: | chr16:44522975-44522807 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 401-572 |
| Cow position: | chr16:30563362-30563195 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 401-572 |
| Cow position: | chr16:31703599-31703432 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 417-563 |
| Cow position: | chr16:28755431-28755285 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 12 |
Show alignments to all cow chromosomes.