Cow genome map
| Conread name: | Ova1-OVRM10163B02 |
| Conread position: | 324-514 |
| Cow position: | chr17:20347309-20347126 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 151, 84 |
| Conread position: | 328-564 |
| Cow position: | chr17:21585641-21585407 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 46, 153 |
| Conread position: | 328-575 |
| Cow position: | chr17:21591780-21591536 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 181 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 331-562 |
| Cow position: | chr17:11051997-11052231 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 61, 207 |
| Conread position: | 331-565 |
| Cow position: | chr17:31562355-31562120 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 59, 85 |
| Conread position: | 332-473 |
| Cow position: | chr17:25148106-25147965 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 332-507 |
| Cow position: | chr17:24997368-24997193 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 332-565 |
| Cow position: | chr17:1325238-1325459 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 332-565 |
| Cow position: | chr17:11072270-11072499 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 214, 58 |
| Conread position: | 332-565 |
| Cow position: | chr17:24861647-24861876 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 332-565 |
| Cow position: | chr17:25546242-25546009 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 332-569 |
| Cow position: | chr17:27302350-27302114 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 181 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 216, 177 |
| Conread position: | 332-572 |
| Cow position: | chr17:1730236-1730475 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 0 |
| Conread position: | 332-572 |
| Cow position: | chr17:15483758-15483523 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 332-572 |
| Cow position: | chr17:16359940-16360176 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 217, 90 |
| Conread position: | 332-573 |
| Cow position: | chr17:4879195-4879434 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 180 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 332-581 |
| Cow position: | chr17:1491262-1491510 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 33 |
| Conread position: | 337-564 |
| Cow position: | chr17:38189914-38189695 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 337-577 |
| Cow position: | chr17:1756936-1756696 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 338-555 |
| Cow position: | chr17:891695-891479 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 97 |
| Conread position: | 344-565 |
| Cow position: | chr17:21461130-21461348 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 345-560 |
| Cow position: | chr17:10636398-10636179 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 47, 75 |
| Conread position: | 352-573 |
| Cow position: | chr17:16380554-16380333 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 40, 64 |
| Conread position: | 357-564 |
| Cow position: | chr17:17641847-17641641 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 64, 97 |
| Conread position: | 371-518 |
| Cow position: | chr17:5347956-5347808 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 372-581 |
| Cow position: | chr17:6763109-6763326 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 13, 86 |
| Conread position: | 380-564 |
| Cow position: | chr17:11124388-11124205 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 40, 34 |
| Conread position: | 383-487 |
| Cow position: | chr17:24988793-24988689 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 86, 94 |
| Conread position: | 388-564 |
| Cow position: | chr17:27761234-27761409 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 101, 25 |
| Conread position: | 402-557 |
| Cow position: | chr17:34054058-34054211 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 402-566 |
| Cow position: | chr17:22836161-22835996 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 419-563 |
| Cow position: | chr17:2134747-2134606 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 103, 0 |
Show alignments to all cow chromosomes.