Cow genome map
| Conread name: | Ova1-OVRM10163B02 |
| Conread position: | 316-563 |
| Cow position: | chr2:39579004-39579243 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 23, 64 |
| Conread position: | 317-564 |
| Cow position: | chr2:54448598-54448843 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 22, 102 |
| Conread position: | 317-581 |
| Cow position: | chr2:57381743-57381478 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 11, 167 |
| Conread position: | 325-531 |
| Cow position: | chr2:17862060-17862257 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 88, 69 |
| Conread position: | 326-492 |
| Cow position: | chr2:63042047-63041874 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 326-563 |
| Cow position: | chr2:34328899-34328666 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 39, 166 |
| Conread position: | 326-565 |
| Cow position: | chr2:16798912-16799148 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 22, 65 |
| Conread position: | 326-565 |
| Cow position: | chr2:46773415-46773183 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 328-448 |
| Cow position: | chr2:45284188-45284306 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 328-552 |
| Cow position: | chr2:43015590-43015377 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 331-564 |
| Cow position: | chr2:37076516-37076285 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 202, 0 |
| Conread position: | 331-564 |
| Cow position: | chr2:46408846-46408616 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 174, 36 |
| Conread position: | 331-572 |
| Cow position: | chr2:43551213-43551452 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 332-448 |
| Cow position: | chr2:46215651-46215535 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 332-469 |
| Cow position: | chr2:28574446-28574583 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 332-481 |
| Cow position: | chr2:66982057-66982207 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 332-532 |
| Cow position: | chr2:54443184-54442990 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 332-542 |
| Cow position: | chr2:46939142-46939345 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 332-548 |
| Cow position: | chr2:63090364-63090156 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 332-549 |
| Cow position: | chr2:50138446-50138235 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 332-564 |
| Cow position: | chr2:30639596-30639833 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 99, 54 |
| Conread position: | 332-565 |
| Cow position: | chr2:12146244-12146470 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 180 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 332-572 |
| Cow position: | chr2:38871902-38872141 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 139, 39 |
| Conread position: | 332-573 |
| Cow position: | chr2:46008591-46008352 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 332-576 |
| Cow position: | chr2:74693102-74692856 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 64 |
| Conread position: | 332-579 |
| Cow position: | chr2:46025418-46025661 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 333-446 |
| Cow position: | chr2:64175579-64175467 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 333-568 |
| Cow position: | chr2:46966719-46966954 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 334-563 |
| Cow position: | chr2:70829704-70829928 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 24, 60 |
| Conread position: | 338-568 |
| Cow position: | chr2:45773281-45773500 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 339-564 |
| Cow position: | chr2:9937357-9937574 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 207, 17 |
| Conread position: | 339-573 |
| Cow position: | chr2:40015483-40015727 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 34, 38 |
| Conread position: | 340-564 |
| Cow position: | chr2:38876606-38876822 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 135, 36 |
| Conread position: | 341-564 |
| Cow position: | chr2:38838191-38837969 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 206, 150 |
| Conread position: | 357-564 |
| Cow position: | chr2:44556669-44556463 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 108, 141 |
| Conread position: | 379-515 |
| Cow position: | chr2:86513779-86513644 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 382-560 |
| Cow position: | chr2:65399985-65400164 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 167, 151 |
| Conread position: | 384-520 |
| Cow position: | chr2:10970135-10969998 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 388-565 |
| Cow position: | chr2:7348231-7348054 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 40, 25 |
| Conread position: | 391-573 |
| Cow position: | chr2:1332390-1332569 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 435-561 |
| Cow position: | chr2:40048139-40048265 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 28, 18 |
Show alignments to all cow chromosomes.