Cow genome map
| Conread name: | Ova1-OVRM10163B02 |
| Conread position: | 306-591 |
| Cow position: | chr21:35449747-35449476 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 27, 43 |
| Conread position: | 326-572 |
| Cow position: | chr21:25592857-25592619 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 328-485 |
| Cow position: | chr21:12898610-12898766 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 330-563 |
| Cow position: | chr21:9207002-9206786 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 182, 62 |
| Conread position: | 330-573 |
| Cow position: | chr21:23639706-23639453 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 331-565 |
| Cow position: | chr21:20786032-20785793 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 183 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 61, 88 |
| Conread position: | 332-502 |
| Cow position: | chr21:6326679-6326510 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 332-540 |
| Cow position: | chr21:17933846-17933628 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 60, 88 |
| Conread position: | 332-547 |
| Cow position: | chr21:45501859-45502069 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 173, 49 |
| Conread position: | 332-564 |
| Cow position: | chr21:41532397-41532624 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 332-565 |
| Cow position: | chr21:20186208-20185970 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 87 |
| Conread position: | 332-577 |
| Cow position: | chr21:8851084-8851332 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 59, 124 |
| Conread position: | 333-455 |
| Cow position: | chr21:7074196-7074076 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 333-569 |
| Cow position: | chr21:24735405-24735164 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 14 |
| Conread position: | 334-480 |
| Cow position: | chr21:7747582-7747727 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 335-473 |
| Cow position: | chr21:41569424-41569288 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 335-564 |
| Cow position: | chr21:42475263-42475036 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 337-558 |
| Cow position: | chr21:41548119-41547909 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 340-562 |
| Cow position: | chr21:43626720-43626493 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 61, 8 |
| Conread position: | 340-564 |
| Cow position: | chr21:1184776-1184557 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 344-565 |
| Cow position: | chr21:47963476-47963263 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 359-564 |
| Cow position: | chr21:29200619-29200822 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 368-573 |
| Cow position: | chr21:24207624-24207826 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 58, 49 |
| Conread position: | 379-564 |
| Cow position: | chr21:34428412-34428594 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 173, 14 |
| Conread position: | 379-574 |
| Cow position: | chr21:20172578-20172389 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 384-565 |
| Cow position: | chr21:43623960-43623782 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 91, 70 |
| Conread position: | 385-580 |
| Cow position: | chr21:42169456-42169645 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 389-562 |
| Cow position: | chr21:46767162-46766985 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 395-564 |
| Cow position: | chr21:16845179-16845013 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 109, 18 |
| Conread position: | 397-563 |
| Cow position: | chr21:44721977-44722142 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 108, 17 |
| Conread position: | 457-564 |
| Cow position: | chr21:6134576-6134469 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.